RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 COX17Q14061 63 aa8.23□□□□□ -1.09
SNHG4-201ENST00000448190 LGALS3P17931 250 aaKnown RBP8.22□□□□□ -1.09
SNHG4-201ENST00000448190 SFTA2Q6UW10 78 aa8.22□□□□□ -1.09
SNHG4-201ENST00000448190 HIST3H2BBQ8N257 126 aa8.22□□□□□ -1.09
SNHG4-201ENST00000448190 LINC00167Q96N53 147 aa8.22□□□□□ -1.09
SNHG4-201ENST00000448190 J3QL48 77 aa8.21□□□□□ -1.1
SNHG4-201ENST00000448190 HERV-K104P63124 156 aa8.21□□□□□ -1.1
SNHG4-201ENST00000448190 SRSF9Q13242 221 aaKnown RBP eCLIP8.21□□□□□ -1.1
SNHG4-201ENST00000448190 LBHQ53QV2 105 aaPredicted RBP8.21□□□□□ -1.1
SNHG4-201ENST00000448190 MRPL55Q7Z7F7 128 aaKnown RBP8.21□□□□□ -1.1
SNHG4-201ENST00000448190 Q8NDZ9 215 aa8.21□□□□□ -1.1
SNHG4-201ENST00000448190 PLA2G2DQ9UNK4 145 aa8.21□□□□□ -1.1
SNHG4-201ENST00000448190 S100A6P06703 90 aa8.2□□□□□ -1.1
SNHG4-201ENST00000448190 S100A2P29034 98 aa8.2□□□□□ -1.1
SNHG4-201ENST00000448190 ATOH7Q8N100 152 aa8.2□□□□□ -1.1
SNHG4-201ENST00000448190 MIR7-3HGQ8N6C7 128 aa8.2□□□□□ -1.1
SNHG4-201ENST00000448190 DAND5Q8N907 189 aa8.2□□□□□ -1.1
SNHG4-201ENST00000448190 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
SNHG4-201ENST00000448190 E9PLD3 99 aa8.19□□□□□ -1.1
SNHG4-201ENST00000448190 SNRPEP62304 92 aaKnown RBP8.19□□□□□ -1.1
SNHG4-201ENST00000448190 HIST1H2BLQ99880 126 aa8.19□□□□□ -1.1
SNHG4-201ENST00000448190 KRTAP29-1A8MX34 341 aaPredicted RBP8.18□□□□□ -1.1
SNHG4-201ENST00000448190 IGLV7-43P04211 117 aa8.18□□□□□ -1.1
SNHG4-201ENST00000448190 VPREB1P12018 145 aa8.18□□□□□ -1.1
SNHG4-201ENST00000448190 SPINK6Q6UWN8 80 aa8.18□□□□□ -1.1
SNHG4-201ENST00000448190 TP73-AS1Q9UF72 201 aa8.18□□□□□ -1.1
SNHG4-201ENST00000448190 IGLV5-37A0A075B6J1 123 aa8.17□□□□□ -1.1
SNHG4-201ENST00000448190 IGKV2D-26A0A0A0MRZ7 120 aa8.17□□□□□ -1.1
SNHG4-201ENST00000448190 C20orf202A1L168 122 aa8.17□□□□□ -1.1
SNHG4-201ENST00000448190 TTTY13Q9BZ97 58 aa8.17□□□□□ -1.1
SNHG4-201ENST00000448190 IGKV2-28A0A075B6P5 120 aa8.16□□□□□ -1.1
SNHG4-201ENST00000448190 LINC00587B1AMM8 73 aa8.16□□□□□ -1.1
SNHG4-201ENST00000448190 OXTP01178 125 aa8.16□□□□□ -1.1
SNHG4-201ENST00000448190 IGKV2D-28P01615 120 aa8.16□□□□□ -1.1
SNHG4-201ENST00000448190 NMUP48645 174 aa8.16□□□□□ -1.1
SNHG4-201ENST00000448190 RPL24P83731 157 aaKnown RBP8.16□□□□□ -1.1
SNHG4-201ENST00000448190 BOD1L2Q8IYS8 172 aa8.16□□□□□ -1.1
SNHG4-201ENST00000448190 A0A0J9YXY3 114 aa8.15□□□□□ -1.1
SNHG4-201ENST00000448190 NPC2P61916 151 aa8.14□□□□□ -1.11
SNHG4-201ENST00000448190 ANKRD39Q53RE8 183 aa8.14□□□□□ -1.11
SNHG4-201ENST00000448190 ADAMTSL4-AS1Q5T5F5 129 aa8.14□□□□□ -1.11
SNHG4-201ENST00000448190 DMBT1Q9UGM3 2413 aaPredicted RBP8.13□□□□□ -1.11
SNHG4-201ENST00000448190 NCR3O14931 201 aa8.13□□□□□ -1.11
SNHG4-201ENST00000448190 IGLV1-50A0A075B6I6 118 aa8.12□□□□□ -1.11
SNHG4-201ENST00000448190 C5orf52A6NGY3 159 aa8.12□□□□□ -1.11
SNHG4-201ENST00000448190 ZNF815PA8K554 130 aa8.12□□□□□ -1.11
SNHG4-201ENST00000448190 TMEM238C9JI98 176 aa8.12□□□□□ -1.11
SNHG4-201ENST00000448190 M0R378 163 aa8.11□□□□□ -1.11
SNHG4-201ENST00000448190 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
SNHG4-201ENST00000448190 BCE1O60756 84 aa8.11□□□□□ -1.11
SNHG4-201ENST00000448190 REG3GQ6UW15 175 aa8.11□□□□□ -1.11
SNHG4-201ENST00000448190 DIRC1Q969H9 104 aa8.11□□□□□ -1.11
SNHG4-201ENST00000448190 ZNF861PO60384 105 aa8.1□□□□□ -1.11
SNHG4-201ENST00000448190 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
SNHG4-201ENST00000448190 TNXBP22105 4242 aa8.09□□□□□ -1.11
SNHG4-201ENST00000448190 SCGB1D1O95968 90 aa8.09□□□□□ -1.11
SNHG4-201ENST00000448190 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.11
SNHG4-201ENST00000448190 PCP2Q8IVA1 136 aa8.09□□□□□ -1.11
SNHG4-201ENST00000448190 LINC01600Q96MT4 127 aa8.09□□□□□ -1.11
SNHG4-201ENST00000448190 H0Y9J4 135 aa8.08□□□□□ -1.12
SNHG4-201ENST00000448190 LITAFQ99732 161 aa8.08□□□□□ -1.12
SNHG4-201ENST00000448190 MIEN1Q9BRT3 115 aa8.08□□□□□ -1.12
SNHG4-201ENST00000448190 TMEM126AQ9H061 195 aa8.08□□□□□ -1.12
SNHG4-201ENST00000448190 LOC107984156A0A0G2JMH3 177 aa8.07□□□□□ -1.12
SNHG4-201ENST00000448190 UBE2AP49459 152 aa8.07□□□□□ -1.12
SNHG4-201ENST00000448190 FAM19A1Q7Z5A9 133 aa8.07□□□□□ -1.12
SNHG4-201ENST00000448190 ARL17AQ8IVW1 177 aa8.07□□□□□ -1.12
SNHG4-201ENST00000448190 RPL28P46779 137 aaKnown RBP8.06□□□□□ -1.12
SNHG4-201ENST00000448190 SCGB1D4Q6XE38 83 aa8.06□□□□□ -1.12
SNHG4-201ENST00000448190 TRBV10-3A0A0K0K1G6 114 aa8.05□□□□□ -1.12
SNHG4-201ENST00000448190 AKR1D1P51857 326 aa8.05□□□□□ -1.12
SNHG4-201ENST00000448190 PRLHP81277 87 aa8.05□□□□□ -1.12
SNHG4-201ENST00000448190 LINC00308Q8TCZ7 52 aa8.05□□□□□ -1.12
SNHG4-201ENST00000448190 HSBP1L1C9JCN9 74 aa8.04□□□□□ -1.12
SNHG4-201ENST00000448190 KRTAP10-8P60410 259 aa8.04□□□□□ -1.12
SNHG4-201ENST00000448190 PRR26Q8N8Z3 221 aa8.04□□□□□ -1.12
SNHG4-201ENST00000448190 TMA7Q9Y2S6 64 aaKnown RBP8.04□□□□□ -1.12
SNHG4-201ENST00000448190 TIMM17BO60830 172 aa8.03□□□□□ -1.12
SNHG4-201ENST00000448190 KRTAP13-1Q8IUC0 172 aa8.03□□□□□ -1.12
SNHG4-201ENST00000448190 ANAPC11Q9NYG5 84 aa8.03□□□□□ -1.12
SNHG4-201ENST00000448190 KRTAP1-4P0C5Y4 121 aa8.02□□□□□ -1.13
SNHG4-201ENST00000448190 DDTP30046 118 aa8.02□□□□□ -1.13
SNHG4-201ENST00000448190 NDUFC2O95298 119 aa8.01□□□□□ -1.13
SNHG4-201ENST00000448190 S100A7L2Q5SY68 101 aa8.01□□□□□ -1.13
SNHG4-201ENST00000448190 KCNQ1DNQ9H478 68 aa8.01□□□□□ -1.13
SNHG4-201ENST00000448190 SPANXB1Q9NS25 103 aaPredicted RBP8.01□□□□□ -1.13
SNHG4-201ENST00000448190 TRBV10-2A0A0K0K1G8 114 aa8□□□□□ -1.13
SNHG4-201ENST00000448190 OR13C6PQ8NH95 151 aa8□□□□□ -1.13
SNHG4-201ENST00000448190 HIGD2AQ9BW72 106 aa8□□□□□ -1.13
SNHG4-201ENST00000448190 PRYO14603 147 aa7.99□□□□□ -1.13
SNHG4-201ENST00000448190 MUSTN1Q8IVN3 82 aa7.99□□□□□ -1.13
SNHG4-201ENST00000448190 ETDCA0A1B0GVM5 59 aa7.98□□□□□ -1.13
SNHG4-201ENST00000448190 SPANXDQ9BXN6 97 aa7.98□□□□□ -1.13
SNHG4-201ENST00000448190 SPANXCQ9NY87 97 aa7.98□□□□□ -1.13
SNHG4-201ENST00000448190 HMCN2Q8NDA2 5059 aa7.97□□□□□ -1.13
SNHG4-201ENST00000448190 IGLV6-57P01721 117 aa7.97□□□□□ -1.13
SNHG4-201ENST00000448190 SPRR1AP35321 89 aa7.96□□□□□ -1.14
SNHG4-201ENST00000448190 S100A12P80511 92 aa7.96□□□□□ -1.14
SNHG4-201ENST00000448190 B5MCH6 92 aa7.95□□□□□ -1.14
SNHG4-201ENST00000448190 KRTAP4-16G5E9R7 235 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms