RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 NHLRC4P0CG21 123 aaPredicted RBP11.99□□□□□ -0.49
CLDN9-201ENST00000445369 C3orf56Q8N813 242 aa11.99□□□□□ -0.49
CLDN9-201ENST00000445369 ORMDL1Q9P0S3 153 aa11.99□□□□□ -0.49
CLDN9-201ENST00000445369 GAGE2AQ6NT46 116 aa11.98□□□□□ -0.49
CLDN9-201ENST00000445369 LINC00643Q86TS7 51 aa11.97□□□□□ -0.49
CLDN9-201ENST00000445369 Q8N814 137 aa11.96□□□□□ -0.49
CLDN9-201ENST00000445369 C14orf132Q9NPU4 83 aa11.96□□□□□ -0.49
CLDN9-201ENST00000445369 C6orf48Q9UBA6 75 aa11.95□□□□□ -0.5
CLDN9-201ENST00000445369 CMYA5Q8N3K9 4069 aa11.95□□□□□ -0.5
CLDN9-201ENST00000445369 C6orf99Q4VX62 202 aa11.95□□□□□ -0.5
CLDN9-201ENST00000445369 S100A7L2Q5SY68 101 aa11.95□□□□□ -0.5
CLDN9-201ENST00000445369 IMUPQ9GZP8 106 aa11.95□□□□□ -0.5
CLDN9-201ENST00000445369 KRTAP26-1Q6PEX3 210 aa11.94□□□□□ -0.5
CLDN9-201ENST00000445369 IGLV6-57P01721 117 aa11.91□□□□□ -0.5
CLDN9-201ENST00000445369 ESRGQ1W209 222 aa11.91□□□□□ -0.5
CLDN9-201ENST00000445369 ANK2Q01484 3957 aa11.9□□□□□ -0.5
CLDN9-201ENST00000445369 RPL18AQ02543 176 aaKnown RBP11.9□□□□□ -0.5
CLDN9-201ENST00000445369 LINC00575Q6W349 94 aa11.89□□□□□ -0.51
CLDN9-201ENST00000445369 FBN1P35555 2871 aaKnown RBP11.89□□□□□ -0.51
CLDN9-201ENST00000445369 TMEM256-PLSCR3K7ERE1 68 aa11.88□□□□□ -0.51
CLDN9-201ENST00000445369 ZNF561-AS1K7EIQ3 104 aa11.88□□□□□ -0.51
CLDN9-201ENST00000445369 HIGD2BQ4VC39 106 aa11.88□□□□□ -0.51
CLDN9-201ENST00000445369 DNAH3Q8TD57 4116 aa11.87□□□□□ -0.51
CLDN9-201ENST00000445369 DEFB131BA0A096LNP1 70 aa11.87□□□□□ -0.51
CLDN9-201ENST00000445369 JMJD7-PLA2G4BH0Y9G9 81 aa11.87□□□□□ -0.51
CLDN9-201ENST00000445369 C15orf56Q8N910 161 aa11.87□□□□□ -0.51
CLDN9-201ENST00000445369 CAMK2N2Q96S95 79 aa11.87□□□□□ -0.51
CLDN9-201ENST00000445369 XAGE1AQ9HD64 81 aa11.87□□□□□ -0.51
CLDN9-201ENST00000445369 C11orf45Q8TAV5 145 aa11.86□□□□□ -0.51
CLDN9-201ENST00000445369 LINC01556Q5JQF7 62 aa11.85□□□□□ -0.51
CLDN9-201ENST00000445369 LINC00846Q9NV44 126 aa11.85□□□□□ -0.51
CLDN9-201ENST00000445369 TRBV10-3A0A0K0K1G6 114 aa11.84□□□□□ -0.51
CLDN9-201ENST00000445369 FAM236AA0A1B0GUQ0 79 aa11.83□□□□□ -0.51
CLDN9-201ENST00000445369 FAM236BA0A1B0GV22 79 aa11.83□□□□□ -0.51
CLDN9-201ENST00000445369 CCKP06307 115 aa11.83□□□□□ -0.51
CLDN9-201ENST00000445369 Q6ZRU5 148 aa11.83□□□□□ -0.51
CLDN9-201ENST00000445369 hADV29S1A0JD25 119 aa11.83□□□□□ -0.52
CLDN9-201ENST00000445369 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
CLDN9-201ENST00000445369 C1orf43Q9BWL3 253 aa11.82□□□□□ -0.52
CLDN9-201ENST00000445369 TRAV23DV6A0A075B6W5 121 aa11.82□□□□□ -0.52
CLDN9-201ENST00000445369 CCDC179H3BU77 68 aa11.82□□□□□ -0.52
CLDN9-201ENST00000445369 VPREB1P12018 145 aa11.81□□□□□ -0.52
CLDN9-201ENST00000445369 TENM3Q9P273 2699 aa11.81□□□□□ -0.52
CLDN9-201ENST00000445369 STAB1Q9NY15 2570 aa11.8□□□□□ -0.52
CLDN9-201ENST00000445369 Q6JHZ5 121 aa11.8□□□□□ -0.52
CLDN9-201ENST00000445369 DIRC1Q969H9 104 aa11.79□□□□□ -0.52
CLDN9-201ENST00000445369 NDUFC2-KCTD14E9PQ53 114 aa11.79□□□□□ -0.52
CLDN9-201ENST00000445369 IGKV2D-24A0A075B6R9 120 aa11.78□□□□□ -0.52
CLDN9-201ENST00000445369 DNAH10OSP0CZ25 163 aa11.77□□□□□ -0.52
CLDN9-201ENST00000445369 F8WDY8 70 aa11.77□□□□□ -0.53
CLDN9-201ENST00000445369 ZNF73O43830 326 aaPredicted RBP11.77□□□□□ -0.53
CLDN9-201ENST00000445369 PKD1L1Q8TDX9 2849 aa11.76□□□□□ -0.53
CLDN9-201ENST00000445369 B5MCH6 92 aa11.75□□□□□ -0.53
CLDN9-201ENST00000445369 M0R378 163 aa11.75□□□□□ -0.53
CLDN9-201ENST00000445369 Q6ZQY7 126 aa11.75□□□□□ -0.53
CLDN9-201ENST00000445369 IGKV3D-7A0A0C4DH55 119 aa11.74□□□□□ -0.53
CLDN9-201ENST00000445369 TRBV7-6A0A0J9YX20 115 aa11.74□□□□□ -0.53
CLDN9-201ENST00000445369 ELOF1P60002 83 aaKnown RBP11.74□□□□□ -0.53
CLDN9-201ENST00000445369 HIST1H4AP62805 103 aaKnown RBP11.74□□□□□ -0.53
CLDN9-201ENST00000445369 Q6ZRP5 223 aa11.74□□□□□ -0.53
CLDN9-201ENST00000445369 TRAV10A0A0B4J240 114 aa11.73□□□□□ -0.53
CLDN9-201ENST00000445369 COX7BP24311 80 aa11.73□□□□□ -0.53
CLDN9-201ENST00000445369 H3BQ85 93 aa11.72□□□□□ -0.53
CLDN9-201ENST00000445369 RBM3P98179 157 aaKnown RBP11.72□□□□□ -0.53
CLDN9-201ENST00000445369 SYCNQ0VAF6 134 aa11.72□□□□□ -0.53
CLDN9-201ENST00000445369 LOC110117498A0A087WWA1 95 aa11.71□□□□□ -0.53
CLDN9-201ENST00000445369 Q6ZQT0 140 aa11.71□□□□□ -0.53
CLDN9-201ENST00000445369 TM2D3Q9BRN9 247 aa11.71□□□□□ -0.53
CLDN9-201ENST00000445369 LAMTOR3Q9UHA4 124 aa11.71□□□□□ -0.54
CLDN9-201ENST00000445369 PRB2P02812 416 aaPredicted RBP11.7□□□□□ -0.54
CLDN9-201ENST00000445369 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.7□□□□□ -0.54
CLDN9-201ENST00000445369 LINC00588Q9Y4M8 146 aa11.7□□□□□ -0.54
CLDN9-201ENST00000445369 K7EIL1 84 aa11.66□□□□□ -0.54
CLDN9-201ENST00000445369 ATP5EP2Q5VTU8 51 aa11.66□□□□□ -0.54
CLDN9-201ENST00000445369 LINC00528Q8N1L1 170 aa11.66□□□□□ -0.54
CLDN9-201ENST00000445369 SS18L2Q9UHA2 77 aa11.66□□□□□ -0.54
CLDN9-201ENST00000445369 COL6A5A8TX70 2615 aa11.65□□□□□ -0.54
CLDN9-201ENST00000445369 HUWE1Q7Z6Z7 4374 aaKnown RBP11.65□□□□□ -0.54
CLDN9-201ENST00000445369 ATOX1O00244 68 aa11.64□□□□□ -0.55
CLDN9-201ENST00000445369 A0A087WVE0 104 aa11.64□□□□□ -0.55
CLDN9-201ENST00000445369 TLX1NBP0CAT3 122 aa11.64□□□□□ -0.55
CLDN9-201ENST00000445369 DSCR8Q96T75 97 aa11.64□□□□□ -0.55
CLDN9-201ENST00000445369 DNAH1Q9P2D7 4330 aa11.63□□□□□ -0.55
CLDN9-201ENST00000445369 M0R2N4 97 aa11.63□□□□□ -0.55
CLDN9-201ENST00000445369 GHRHP01286 108 aa11.63□□□□□ -0.55
CLDN9-201ENST00000445369 UBL5Q9BZL1 73 aa11.63□□□□□ -0.55
CLDN9-201ENST00000445369 PDE6GP18545 87 aa11.63□□□□□ -0.55
CLDN9-201ENST00000445369 MRAPQ8TCY5 172 aa11.63□□□□□ -0.55
CLDN9-201ENST00000445369 SERTAD4-AS1Q5TG53 156 aa11.62□□□□□ -0.55
CLDN9-201ENST00000445369 C3orf22Q8N5N4 141 aa11.62□□□□□ -0.55
CLDN9-201ENST00000445369 USP17L23D6RBM5 183 aa11.61□□□□□ -0.55
CLDN9-201ENST00000445369 UQCRQO14949 82 aa11.61□□□□□ -0.55
CLDN9-201ENST00000445369 CASC10Q5T4H9 136 aa11.61□□□□□ -0.55
CLDN9-201ENST00000445369 TRBV7-4A0A0J9YYF1 115 aa11.6□□□□□ -0.55
CLDN9-201ENST00000445369 NKAPP1Q8N9T2 125 aa11.6□□□□□ -0.55
CLDN9-201ENST00000445369 KCNQ1DNQ9H478 68 aa11.6□□□□□ -0.55
CLDN9-201ENST00000445369 PLA2G2DQ9UNK4 145 aa11.59□□□□□ -0.55
CLDN9-201ENST00000445369 NOTCH1P46531 2555 aa11.59□□□□□ -0.55
CLDN9-201ENST00000445369 COX7CP15954 63 aa11.59□□□□□ -0.55
CLDN9-201ENST00000445369 C7orf33Q8WU49 177 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms