RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 ERG28Q9UKR5 140 aa11.88□□□□□ -0.51
EDEM1-203ENST00000443790 PLNP26678 52 aa11.87□□□□□ -0.51
EDEM1-203ENST00000443790 IGKCP01834 107 aa11.86□□□□□ -0.51
EDEM1-203ENST00000443790 COA6Q5JTJ3 125 aaKnown RBP11.86□□□□□ -0.51
EDEM1-203ENST00000443790 C22orf24Q9Y442 160 aa11.86□□□□□ -0.51
EDEM1-203ENST00000443790 SYS1-DBNDD2H3BUS1 97 aa11.85□□□□□ -0.51
EDEM1-203ENST00000443790 ZNF861PO60384 105 aa11.85□□□□□ -0.51
EDEM1-203ENST00000443790 A0A0U1RRA0 63 aa11.83□□□□□ -0.52
EDEM1-203ENST00000443790 PRR4Q16378 134 aa11.83□□□□□ -0.52
EDEM1-203ENST00000443790 SFTA2Q6UW10 78 aa11.83□□□□□ -0.52
EDEM1-203ENST00000443790 LEPROTO15243 131 aa11.82□□□□□ -0.52
EDEM1-203ENST00000443790 LINC00158P58513 81 aa11.82□□□□□ -0.52
EDEM1-203ENST00000443790 TSPEAR-AS2P59090 65 aa11.81□□□□□ -0.52
EDEM1-203ENST00000443790 HERVK_113P61574 105 aa11.81□□□□□ -0.52
EDEM1-203ENST00000443790 COX17Q14061 63 aa11.81□□□□□ -0.52
EDEM1-203ENST00000443790 LBHQ53QV2 105 aaPredicted RBP11.81□□□□□ -0.52
EDEM1-203ENST00000443790 SND1-IT1Q9HBX3 110 aa11.81□□□□□ -0.52
EDEM1-203ENST00000443790 NDUFA12Q9UI09 145 aa11.81□□□□□ -0.52
EDEM1-203ENST00000443790 C3orf79P0CE67 100 aa11.8□□□□□ -0.52
EDEM1-203ENST00000443790 PLEKHB2Q96CS7 222 aa11.8□□□□□ -0.52
EDEM1-203ENST00000443790 SMIM13P0DJ93 91 aa11.79□□□□□ -0.52
EDEM1-203ENST00000443790 KRTDAPP60985 99 aa11.79□□□□□ -0.52
EDEM1-203ENST00000443790 MEIG1Q5JSS6 88 aa11.79□□□□□ -0.52
EDEM1-203ENST00000443790 PET117Q6UWS5 81 aa11.79□□□□□ -0.52
EDEM1-203ENST00000443790 TP73-AS1Q9UF72 201 aa11.79□□□□□ -0.52
EDEM1-203ENST00000443790 MYMXA0A1B0GTQ4 84 aa11.78□□□□□ -0.52
EDEM1-203ENST00000443790 LINC01545Q5VT33 79 aa11.78□□□□□ -0.52
EDEM1-203ENST00000443790 MRPL55Q7Z7F7 128 aaKnown RBP11.78□□□□□ -0.52
EDEM1-203ENST00000443790 GAGE10A6NGK3 116 aa11.77□□□□□ -0.53
EDEM1-203ENST00000443790 J3QQQ9 107 aa11.77□□□□□ -0.53
EDEM1-203ENST00000443790 HERV-K104P63124 156 aa11.77□□□□□ -0.53
EDEM1-203ENST00000443790 NKAPP1Q8N9T2 125 aa11.77□□□□□ -0.53
EDEM1-203ENST00000443790 LINC00167Q96N53 147 aa11.77□□□□□ -0.53
EDEM1-203ENST00000443790 RPL37AP8A6NKH3 93 aa11.76□□□□□ -0.53
EDEM1-203ENST00000443790 LGALS3P17931 250 aaKnown RBP11.76□□□□□ -0.53
EDEM1-203ENST00000443790 MUC2Q02817 5179 aa11.76□□□□□ -0.53
EDEM1-203ENST00000443790 BCE1O60756 84 aa11.75□□□□□ -0.53
EDEM1-203ENST00000443790 RPL28P46779 137 aaKnown RBP11.75□□□□□ -0.53
EDEM1-203ENST00000443790 IGLV5-37A0A075B6J1 123 aa11.74□□□□□ -0.53
EDEM1-203ENST00000443790 A0A087X002 238 aa11.74□□□□□ -0.53
EDEM1-203ENST00000443790 VPREB1P12018 145 aa11.73□□□□□ -0.53
EDEM1-203ENST00000443790 MIR7-3HGQ8N6C7 128 aa11.73□□□□□ -0.53
EDEM1-203ENST00000443790 Q8NDZ9 215 aa11.73□□□□□ -0.53
EDEM1-203ENST00000443790 E9PLD3 99 aa11.72□□□□□ -0.53
EDEM1-203ENST00000443790 TSPAN13O95857 204 aa11.72□□□□□ -0.53
EDEM1-203ENST00000443790 LINC00587B1AMM8 73 aa11.71□□□□□ -0.53
EDEM1-203ENST00000443790 RPL24P83731 157 aaKnown RBP11.71□□□□□ -0.53
EDEM1-203ENST00000443790 NMUP48645 174 aa11.7□□□□□ -0.54
EDEM1-203ENST00000443790 HIST3H2BBQ8N257 126 aa11.7□□□□□ -0.54
EDEM1-203ENST00000443790 S100A6P06703 90 aa11.69□□□□□ -0.54
EDEM1-203ENST00000443790 CRYGAP11844 174 aa11.69□□□□□ -0.54
EDEM1-203ENST00000443790 DAND5Q8N907 189 aa11.69□□□□□ -0.54
EDEM1-203ENST00000443790 TYMSOSQ8TAI1 123 aa11.69□□□□□ -0.54
EDEM1-203ENST00000443790 IGKV2-28A0A075B6P5 120 aa11.68□□□□□ -0.54
EDEM1-203ENST00000443790 C20orf202A1L168 122 aa11.68□□□□□ -0.54
EDEM1-203ENST00000443790 IGKV2D-28P01615 120 aa11.68□□□□□ -0.54
EDEM1-203ENST00000443790 S100A2P29034 98 aa11.68□□□□□ -0.54
EDEM1-203ENST00000443790 BOD1L2Q8IYS8 172 aa11.67□□□□□ -0.54
EDEM1-203ENST00000443790 ATOH7Q8N100 152 aa11.67□□□□□ -0.54
EDEM1-203ENST00000443790 KRTAP9-2Q9BYQ4 174 aa11.67□□□□□ -0.54
EDEM1-203ENST00000443790 HIST1H2BLQ99880 126 aa11.66□□□□□ -0.54
EDEM1-203ENST00000443790 IGKV2D-26A0A0A0MRZ7 120 aa11.65□□□□□ -0.54
EDEM1-203ENST00000443790 A0A0J9YXY3 114 aa11.65□□□□□ -0.54
EDEM1-203ENST00000443790 KRTAP13-1Q8IUC0 172 aa11.65□□□□□ -0.54
EDEM1-203ENST00000443790 A0A0U1RQV1 116 aa11.64□□□□□ -0.55
EDEM1-203ENST00000443790 SNRPEP62304 92 aaKnown RBP11.64□□□□□ -0.55
EDEM1-203ENST00000443790 ANAPC11Q9NYG5 84 aa11.64□□□□□ -0.55
EDEM1-203ENST00000443790 TTTY13Q9BZ97 58 aa11.63□□□□□ -0.55
EDEM1-203ENST00000443790 M0R378 163 aa11.62□□□□□ -0.55
EDEM1-203ENST00000443790 NCR3O14931 201 aa11.62□□□□□ -0.55
EDEM1-203ENST00000443790 UBE2AP49459 152 aa11.62□□□□□ -0.55
EDEM1-203ENST00000443790 KRTAP13-2Q52LG2 175 aa11.62□□□□□ -0.55
EDEM1-203ENST00000443790 ZNF815PA8K554 130 aa11.61□□□□□ -0.55
EDEM1-203ENST00000443790 TMEM238C9JI98 176 aa11.61□□□□□ -0.55
EDEM1-203ENST00000443790 NPC2P61916 151 aa11.61□□□□□ -0.55
EDEM1-203ENST00000443790 ANKRD39Q53RE8 183 aa11.61□□□□□ -0.55
EDEM1-203ENST00000443790 ADAMTSL4-AS1Q5T5F5 129 aa11.61□□□□□ -0.55
EDEM1-203ENST00000443790 FAM229BQ4G0N7 80 aa11.59□□□□□ -0.55
EDEM1-203ENST00000443790 LOC107984156A0A0G2JMH3 177 aa11.57□□□□□ -0.56
EDEM1-203ENST00000443790 ARL17AQ8IVW1 177 aa11.57□□□□□ -0.56
EDEM1-203ENST00000443790 MIEN1Q9BRT3 115 aa11.57□□□□□ -0.56
EDEM1-203ENST00000443790 TMEM126AQ9H061 195 aa11.57□□□□□ -0.56
EDEM1-203ENST00000443790 C5orf52A6NGY3 159 aa11.56□□□□□ -0.56
EDEM1-203ENST00000443790 EIF4EBP3O60516 100 aaPredicted RBP11.56□□□□□ -0.56
EDEM1-203ENST00000443790 SOSTDC1Q6X4U4 206 aa11.56□□□□□ -0.56
EDEM1-203ENST00000443790 FAM19A1Q7Z5A9 133 aa11.56□□□□□ -0.56
EDEM1-203ENST00000443790 LINC00304Q8N9R0 145 aa11.56□□□□□ -0.56
EDEM1-203ENST00000443790 AKR1D1P51857 326 aa11.55□□□□□ -0.56
EDEM1-203ENST00000443790 LITAFQ99732 161 aa11.55□□□□□ -0.56
EDEM1-203ENST00000443790 RETNLBQ9BQ08 111 aa11.55□□□□□ -0.56
EDEM1-203ENST00000443790 PRLHP81277 87 aa11.54□□□□□ -0.56
EDEM1-203ENST00000443790 TRBV10-3A0A0K0K1G6 114 aa11.53□□□□□ -0.56
EDEM1-203ENST00000443790 TIMM17BO60830 172 aa11.52□□□□□ -0.57
EDEM1-203ENST00000443790 PCP2Q8IVA1 136 aa11.52□□□□□ -0.57
EDEM1-203ENST00000443790 SCGB1D4Q6XE38 83 aa11.51□□□□□ -0.57
EDEM1-203ENST00000443790 LINC00308Q8TCZ7 52 aa11.51□□□□□ -0.57
EDEM1-203ENST00000443790 FAT4Q6V0I7 4981 aa11.5□□□□□ -0.57
EDEM1-203ENST00000443790 SCGB1D1O95968 90 aa11.5□□□□□ -0.57
EDEM1-203ENST00000443790 KRTAP9-6A0A140TA67 174 aa11.49□□□□□ -0.57
EDEM1-203ENST00000443790 PRYO14603 147 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms