RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 C5orf38Q86SI9 138 aa4.29□□□□□ -1.72
PUM1-207ENST00000440538 WWC2-AS2Q96NR7 200 aa4.29□□□□□ -1.72
PUM1-207ENST00000440538 LINC00846Q9NV44 126 aa4.29□□□□□ -1.72
PUM1-207ENST00000440538 LYSTQ99698 3801 aa4.29□□□□□ -1.72
PUM1-207ENST00000440538 IGLV4-60A0A075B6I1 120 aa4.29□□□□□ -1.72
PUM1-207ENST00000440538 LINC00269Q8N2A0 174 aa4.29□□□□□ -1.72
PUM1-207ENST00000440538 LINC00337Q8N6G1 96 aa4.29□□□□□ -1.72
PUM1-207ENST00000440538 TRBV6-8A0A0A6YYG3 113 aa4.29□□□□□ -1.72
PUM1-207ENST00000440538 FUSP35637 526 aaKnown RBP eCLIP4.29□□□□□ -1.721e-6■■□□□ 12.3
PUM1-207ENST00000440538 XCL1P47992 114 aa4.29□□□□□ -1.72
PUM1-207ENST00000440538 ACYP1P07311 99 aa4.28□□□□□ -1.72
PUM1-207ENST00000440538 IGKV2D-24A0A075B6R9 120 aa4.28□□□□□ -1.72
PUM1-207ENST00000440538 J3KT08 172 aa4.28□□□□□ -1.72
PUM1-207ENST00000440538 HIST1H4AP62805 103 aaKnown RBP4.28□□□□□ -1.72
PUM1-207ENST00000440538 MIR7-3HGQ8N6C7 128 aa4.28□□□□□ -1.72
PUM1-207ENST00000440538 IMUPQ9GZP8 106 aa4.28□□□□□ -1.72
PUM1-207ENST00000440538 SPANXA1Q9NS26 97 aa4.28□□□□□ -1.72
PUM1-207ENST00000440538 LINC00588Q9Y4M8 146 aa4.28□□□□□ -1.72
PUM1-207ENST00000440538 IGKV2-28A0A075B6P5 120 aa4.28□□□□□ -1.72
PUM1-207ENST00000440538 TRBV10-1A0A0K0K1A3 114 aa4.28□□□□□ -1.72
PUM1-207ENST00000440538 IGKV2D-28P01615 120 aa4.28□□□□□ -1.72
PUM1-207ENST00000440538 PFN2P35080 140 aa4.28□□□□□ -1.72
PUM1-207ENST00000440538 TRACP01848 142 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 C5orf47Q569G3 176 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 HRCT1Q6UXD1 115 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 LINC00612Q8N6U2 182 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 SMIM11BQ8TCY0 68 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 NUPR2A6NF83 97 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 TIMM17BO60830 172 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 DNAL4O96015 105 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 CRPP02741 224 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 LINC01561Q8N1V8 128 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 OR13C6PQ8NH95 151 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 IGLV5-39A0A0G2JS06 123 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 LINC00158P58513 81 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 PRR3P79522 188 aaKnown RBP4.27□□□□□ -1.73
PUM1-207ENST00000440538 DPH3Q96FX2 82 aa4.27□□□□□ -1.73
PUM1-207ENST00000440538 CASC10Q5T4H9 136 aa4.26□□□□□ -1.73
PUM1-207ENST00000440538 SND1-IT1Q9HBX3 110 aa4.26□□□□□ -1.73
PUM1-207ENST00000440538 TRAV23DV6A0A075B6W5 121 aa4.26□□□□□ -1.73
PUM1-207ENST00000440538 PSCAO43653 123 aa4.26□□□□□ -1.73
PUM1-207ENST00000440538 CXCL5P42830 114 aa4.26□□□□□ -1.73
PUM1-207ENST00000440538 CRYGAP11844 174 aa4.26□□□□□ -1.73
PUM1-207ENST00000440538 RPL18AQ02543 176 aaKnown RBP4.26□□□□□ -1.73
PUM1-207ENST00000440538 IGLV5-45A0A087WSX0 123 aa4.25□□□□□ -1.73
PUM1-207ENST00000440538 USP17L23D6RBM5 183 aa4.25□□□□□ -1.73
PUM1-207ENST00000440538 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
PUM1-207ENST00000440538 ATOX1O00244 68 aa4.25□□□□□ -1.73
PUM1-207ENST00000440538 APLNQ9ULZ1 77 aa4.25□□□□□ -1.73
PUM1-207ENST00000440538 INAFM2P0DMQ5 153 aa4.24□□□□□ -1.73
PUM1-207ENST00000440538 RPL28P46779 137 aaKnown RBP4.24□□□□□ -1.73
PUM1-207ENST00000440538 UPK3BQ9BT76 320 aa4.24□□□□□ -1.73
PUM1-207ENST00000440538 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.24□□□□□ -1.73
PUM1-207ENST00000440538 LELP1Q5T871 98 aa4.24□□□□□ -1.73
PUM1-207ENST00000440538 STARD9Q9P2P6 4700 aa4.24□□□□□ -1.73
PUM1-207ENST00000440538 REG3AQ06141 175 aa4.24□□□□□ -1.73
PUM1-207ENST00000440538 HIGD2BQ4VC39 106 aa4.24□□□□□ -1.73
PUM1-207ENST00000440538 CDC42SE2Q9NRR3 84 aa4.24□□□□□ -1.73
PUM1-207ENST00000440538 ENHOQ6UWT2 76 aa4.23□□□□□ -1.73
PUM1-207ENST00000440538 SERP2Q8N6R1 65 aa4.23□□□□□ -1.73
PUM1-207ENST00000440538 COX7B2Q8TF08 81 aa4.23□□□□□ -1.73
PUM1-207ENST00000440538 PLECQ15149 4684 aaKnown RBP4.22□□□□□ -1.73
PUM1-207ENST00000440538 TRAV13-2A0A0B4J235 113 aa4.22□□□□□ -1.73
PUM1-207ENST00000440538 Q5XG85 94 aa4.22□□□□□ -1.73
PUM1-207ENST00000440538 GHRHP01286 108 aa4.22□□□□□ -1.73
PUM1-207ENST00000440538 SS18Q15532 418 aa4.22□□□□□ -1.73
PUM1-207ENST00000440538 C20orf197Q8N268 126 aa4.22□□□□□ -1.73
PUM1-207ENST00000440538 C1orf43Q9BWL3 253 aa4.22□□□□□ -1.73
PUM1-207ENST00000440538 KRTAP1-5Q9BYS1 174 aa4.22□□□□□ -1.73
PUM1-207ENST00000440538 CHCHD10Q8WYQ3 142 aaPredicted RBP4.21□□□□□ -1.74
PUM1-207ENST00000440538 Q6JHZ5 121 aa4.21□□□□□ -1.74
PUM1-207ENST00000440538 DNAH10OSP0CZ25 163 aa4.2□□□□□ -1.74
PUM1-207ENST00000440538 DNAH7Q8WXX0 4024 aa4.2□□□□□ -1.74
PUM1-207ENST00000440538 LINC00959A0A1B0GUT2 108 aa4.19□□□□□ -1.74
PUM1-207ENST00000440538 TMEM258P61165 79 aa4.19□□□□□ -1.74
PUM1-207ENST00000440538 SNURFQ9Y675 71 aa4.19□□□□□ -1.74
PUM1-207ENST00000440538 RPS28P62857 69 aaKnown RBP4.19□□□□□ -1.74
PUM1-207ENST00000440538 ORMDL1Q9P0S3 153 aa4.19□□□□□ -1.74
PUM1-207ENST00000440538 C9orf116Q5BN46 136 aaPredicted RBP4.19□□□□□ -1.74
PUM1-207ENST00000440538 COPS9Q8WXC6 57 aa4.19□□□□□ -1.74
PUM1-207ENST00000440538 C6orf223Q8N319 242 aa4.18□□□□□ -1.74
PUM1-207ENST00000440538 LINC00476Q8WZB0 136 aa4.18□□□□□ -1.74
PUM1-207ENST00000440538 OBSCN-AS1Q96MR7 158 aa4.18□□□□□ -1.74
PUM1-207ENST00000440538 CCKP06307 115 aa4.18□□□□□ -1.74
PUM1-207ENST00000440538 C6orf226Q5I0X4 101 aa4.18□□□□□ -1.74
PUM1-207ENST00000440538 NBDYA0A0U1RRE5 68 aa4.18□□□□□ -1.74
PUM1-207ENST00000440538 H3BNG1 76 aa4.18□□□□□ -1.74
PUM1-207ENST00000440538 HAMPP81172 84 aa4.18□□□□□ -1.74
PUM1-207ENST00000440538 SCXQ7RTU7 201 aa4.18□□□□□ -1.74
PUM1-207ENST00000440538 C3orf84H3BNL1 204 aa4.17□□□□□ -1.74
PUM1-207ENST00000440538 H0YGX0 51 aa4.17□□□□□ -1.74
PUM1-207ENST00000440538 Q8NDZ9 215 aa4.17□□□□□ -1.74
PUM1-207ENST00000440538 RMI2Q96E14 147 aa4.17□□□□□ -1.74
PUM1-207ENST00000440538 KMT2AQ03164 3969 aa4.16□□□□□ -1.74
PUM1-207ENST00000440538 IGHV3OR16-9A0A0B4J2B5 98 aa4.16□□□□□ -1.74
PUM1-207ENST00000440538 ZNF561-AS1K7EIQ3 104 aa4.16□□□□□ -1.74
PUM1-207ENST00000440538 LINC01556Q5JQF7 62 aa4.16□□□□□ -1.74
PUM1-207ENST00000440538 FAM19A3Q7Z5A8 133 aa4.16□□□□□ -1.74
PUM1-207ENST00000440538 IGKV2-24A0A0C4DH68 120 aa4.16□□□□□ -1.74
PUM1-207ENST00000440538 LINC00336Q6ZUF6 198 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms