RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 PMCHL2Q9BQD1 86 aa8.26□□□□□ -1.09
LTBR-202ENST00000440421 SMIM13P0DJ93 91 aa8.25□□□□□ -1.09
LTBR-202ENST00000440421 RPL28P46779 137 aaKnown RBP8.25□□□□□ -1.09
LTBR-202ENST00000440421 MEIG1Q5JSS6 88 aa8.25□□□□□ -1.09
LTBR-202ENST00000440421 ATP6V1G1O75348 118 aa8.24□□□□□ -1.09
LTBR-202ENST00000440421 PLNP26678 52 aa8.24□□□□□ -1.09
LTBR-202ENST00000440421 NDUFA12Q9UI09 145 aa8.24□□□□□ -1.09
LTBR-202ENST00000440421 IGLV1-50A0A075B6I6 118 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 HIST1H2BKO60814 126 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 DPM2O94777 84 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 HIST1H2BJP06899 126 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 HIST1H2BOP23527 126 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 HIST1H2BBP33778 126 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 UBE2AP49459 152 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 HIST1H2BDP58876 126 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 TSPEAR-AS2P59090 65 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 HIST1H2BCP62807 126 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 HERV-K104P63124 156 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 HIST2H2BEQ16778 126 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.23□□□□□ -1.09
LTBR-202ENST00000440421 HIST1H2BHQ93079 126 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 HIST1H2BNQ99877 126 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 HIST1H2BMQ99879 126 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 MAP1LC3CQ9BXW4 147 aa8.23□□□□□ -1.09
LTBR-202ENST00000440421 TMEM238C9JI98 176 aa8.22□□□□□ -1.09
LTBR-202ENST00000440421 LEPROTO15243 131 aa8.22□□□□□ -1.09
LTBR-202ENST00000440421 MYMXA0A1B0GTQ4 84 aa8.21□□□□□ -1.1
LTBR-202ENST00000440421 IGKCP01834 107 aa8.21□□□□□ -1.1
LTBR-202ENST00000440421 HERVK_113P61574 105 aa8.21□□□□□ -1.1
LTBR-202ENST00000440421 MIR7-3HGQ8N6C7 128 aa8.21□□□□□ -1.1
LTBR-202ENST00000440421 PLEKHB2Q96CS7 222 aa8.21□□□□□ -1.1
LTBR-202ENST00000440421 PRLHP81277 87 aa8.2□□□□□ -1.1
LTBR-202ENST00000440421 BOD1L2Q8IYS8 172 aa8.2□□□□□ -1.1
LTBR-202ENST00000440421 TMEM126AQ9H061 195 aa8.2□□□□□ -1.1
LTBR-202ENST00000440421 LINC00587B1AMM8 73 aa8.19□□□□□ -1.1
LTBR-202ENST00000440421 J3QQQ9 107 aa8.19□□□□□ -1.1
LTBR-202ENST00000440421 FAM19A1Q7Z5A9 133 aa8.19□□□□□ -1.1
LTBR-202ENST00000440421 KRTAP13-1Q8IUC0 172 aa8.19□□□□□ -1.1
LTBR-202ENST00000440421 M0R378 163 aa8.18□□□□□ -1.1
LTBR-202ENST00000440421 NCR3O14931 201 aa8.18□□□□□ -1.1
LTBR-202ENST00000440421 LGALS3P17931 250 aaKnown RBP8.18□□□□□ -1.1
LTBR-202ENST00000440421 RPL13AP40429 203 aaKnown RBP8.18□□□□□ -1.1
LTBR-202ENST00000440421 SYS1-DBNDD2H3BUS1 97 aa8.17□□□□□ -1.1
LTBR-202ENST00000440421 DAND5Q8N907 189 aa8.17□□□□□ -1.1
LTBR-202ENST00000440421 ANAPC11Q9NYG5 84 aa8.16□□□□□ -1.1
LTBR-202ENST00000440421 A0A087X002 238 aa8.15□□□□□ -1.1
LTBR-202ENST00000440421 CRYGAP11844 174 aa8.14□□□□□ -1.11
LTBR-202ENST00000440421 NMUP48645 174 aa8.14□□□□□ -1.11
LTBR-202ENST00000440421 E9PLD3 99 aa8.12□□□□□ -1.11
LTBR-202ENST00000440421 LINC01545Q5VT33 79 aa8.12□□□□□ -1.11
LTBR-202ENST00000440421 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
LTBR-202ENST00000440421 IGKV2D-26A0A0A0MRZ7 120 aa8.11□□□□□ -1.11
LTBR-202ENST00000440421 TRBV10-3A0A0K0K1G6 114 aa8.11□□□□□ -1.11
LTBR-202ENST00000440421 PRYO14603 147 aa8.11□□□□□ -1.11
LTBR-202ENST00000440421 PET117Q6UWS5 81 aa8.11□□□□□ -1.11
LTBR-202ENST00000440421 TYMSOSQ8TAI1 123 aa8.11□□□□□ -1.11
LTBR-202ENST00000440421 MIEN1Q9BRT3 115 aa8.11□□□□□ -1.11
LTBR-202ENST00000440421 A0A0J9YXY3 114 aa8.1□□□□□ -1.11
LTBR-202ENST00000440421 C3orf79P0CE67 100 aa8.1□□□□□ -1.11
LTBR-202ENST00000440421 KRTDAPP60985 99 aa8.1□□□□□ -1.11
LTBR-202ENST00000440421 NPC2P61916 151 aa8.1□□□□□ -1.11
LTBR-202ENST00000440421 COA6Q5JTJ3 125 aaKnown RBP8.1□□□□□ -1.11
LTBR-202ENST00000440421 UBR4Q5T4S7 5183 aa8.1□□□□□ -1.11
LTBR-202ENST00000440421 LOC107984156A0A0G2JMH3 177 aa8.09□□□□□ -1.11
LTBR-202ENST00000440421 TSPAN13O95857 204 aa8.09□□□□□ -1.11
LTBR-202ENST00000440421 ARL17AQ8IVW1 177 aa8.09□□□□□ -1.11
LTBR-202ENST00000440421 FAM229BQ4G0N7 80 aa8.08□□□□□ -1.12
LTBR-202ENST00000440421 KRTAP13-2Q52LG2 175 aa8.08□□□□□ -1.12
LTBR-202ENST00000440421 ADAMTSL4-AS1Q5T5F5 129 aa8.08□□□□□ -1.12
LTBR-202ENST00000440421 KCNQ1DNQ9H478 68 aa8.08□□□□□ -1.12
LTBR-202ENST00000440421 ETDCA0A1B0GVM5 59 aa8.07□□□□□ -1.12
LTBR-202ENST00000440421 EIF4EBP3O60516 100 aaPredicted RBP8.07□□□□□ -1.12
LTBR-202ENST00000440421 DDTP30046 118 aa8.07□□□□□ -1.12
LTBR-202ENST00000440421 SOSTDC1Q6X4U4 206 aa8.07□□□□□ -1.12
LTBR-202ENST00000440421 LINC00337Q8N6G1 96 aa8.07□□□□□ -1.12
LTBR-202ENST00000440421 TRBV10-2A0A0K0K1G8 114 aa8.06□□□□□ -1.12
LTBR-202ENST00000440421 SPRR1AP35321 89 aa8.06□□□□□ -1.12
LTBR-202ENST00000440421 S100A12P80511 92 aa8.06□□□□□ -1.12
LTBR-202ENST00000440421 SPANXB1Q9NS25 103 aaPredicted RBP8.06□□□□□ -1.12
LTBR-202ENST00000440421 KRTAP4-16G5E9R7 235 aaPredicted RBP8.05□□□□□ -1.12
LTBR-202ENST00000440421 PRR4Q16378 134 aa8.05□□□□□ -1.12
LTBR-202ENST00000440421 S100A7L2Q5SY68 101 aa8.05□□□□□ -1.12
LTBR-202ENST00000440421 TTTY13Q9BZ97 58 aa8.05□□□□□ -1.12
LTBR-202ENST00000440421 ZNF815PA8K554 130 aa8.04□□□□□ -1.12
LTBR-202ENST00000440421 NDUFC2O95298 119 aa8.04□□□□□ -1.12
LTBR-202ENST00000440421 SMCR5Q8TEV8 140 aa8.04□□□□□ -1.12
LTBR-202ENST00000440421 SPRR4Q96PI1 79 aa8.04□□□□□ -1.12
LTBR-202ENST00000440421 LRP2P98164 4655 aa8.03□□□□□ -1.12
LTBR-202ENST00000440421 C20orf202A1L168 122 aa8.03□□□□□ -1.12
LTBR-202ENST00000440421 LITAFQ99732 161 aa8.03□□□□□ -1.12
LTBR-202ENST00000440421 B5MCH6 92 aa8.02□□□□□ -1.13
LTBR-202ENST00000440421 S100A1P23297 94 aa8.02□□□□□ -1.13
LTBR-202ENST00000440421 ATOH7Q8N100 152 aa8.02□□□□□ -1.13
LTBR-202ENST00000440421 C3orf22Q8N5N4 141 aa8.02□□□□□ -1.13
LTBR-202ENST00000440421 LINC00304Q8N9R0 145 aa8.02□□□□□ -1.13
LTBR-202ENST00000440421 ZNF706Q9Y5V0 76 aaPredicted RBP8.02□□□□□ -1.13
LTBR-202ENST00000440421 TIMM17BO60830 172 aa8.01□□□□□ -1.13
LTBR-202ENST00000440421 IGLV6-57P01721 117 aa8.01□□□□□ -1.13
LTBR-202ENST00000440421 LINC00308Q8TCZ7 52 aa8.01□□□□□ -1.13
LTBR-202ENST00000440421 PPDPFQ9H3Y8 114 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms