RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 TTC32Q5I0X7 151 aa5.04□□□□□ -1.6
HMGB2-202ENST00000438704 C2orf82Q6UX34 121 aa5.04□□□□□ -1.6
HMGB2-202ENST00000438704 IGKV2D-24A0A075B6R9 120 aa5.03□□□□□ -1.6
HMGB2-202ENST00000438704 NDUFC2O95298 119 aa5.03□□□□□ -1.6
HMGB2-202ENST00000438704 TSPAN13O95857 204 aa5.03□□□□□ -1.6
HMGB2-202ENST00000438704 LINC00158P58513 81 aa5.03□□□□□ -1.6
HMGB2-202ENST00000438704 LYRM7Q5U5X0 104 aa5.03□□□□□ -1.6
HMGB2-202ENST00000438704 UNQ6190/PRO20217Q6UXQ8 127 aa5.03□□□□□ -1.6
HMGB2-202ENST00000438704 DAND5Q8N907 189 aa5.03□□□□□ -1.6
HMGB2-202ENST00000438704 RAB37Q96AX2 223 aa5.03□□□□□ -1.6
HMGB2-202ENST00000438704 K7EP34 96 aa5.02□□□□□ -1.61
HMGB2-202ENST00000438704 VAMP3Q15836 100 aa5.02□□□□□ -1.61
HMGB2-202ENST00000438704 C10orf25Q5T742 122 aa5.02□□□□□ -1.61
HMGB2-202ENST00000438704 GTF2H5Q6ZYL4 71 aa5.02□□□□□ -1.61
HMGB2-202ENST00000438704 UBE2DNLQ8IWF7 75 aa5.02□□□□□ -1.61
HMGB2-202ENST00000438704 KRTAP1-5Q9BYS1 174 aa5.02□□□□□ -1.61
HMGB2-202ENST00000438704 C6orf48Q9UBA6 75 aa5.02□□□□□ -1.61
HMGB2-202ENST00000438704 TRAV13-2A0A0B4J235 113 aa5.01□□□□□ -1.61
HMGB2-202ENST00000438704 TLX1NBP0CAT3 122 aa5.01□□□□□ -1.61
HMGB2-202ENST00000438704 C6orf223Q8N319 242 aa5.01□□□□□ -1.61
HMGB2-202ENST00000438704 SND1-IT1Q9HBX3 110 aa5.01□□□□□ -1.61
HMGB2-202ENST00000438704 TRBV20-1A0A075B6N2 111 aa5□□□□□ -1.61
HMGB2-202ENST00000438704 IGKV2-28A0A075B6P5 120 aa5□□□□□ -1.61
HMGB2-202ENST00000438704 A0A0U1RRA0 63 aa5□□□□□ -1.61
HMGB2-202ENST00000438704 NBDYA0A0U1RRE5 68 aa5□□□□□ -1.61
HMGB2-202ENST00000438704 GAGE10A6NGK3 116 aa5□□□□□ -1.61
HMGB2-202ENST00000438704 IGKV2D-28P01615 120 aa5□□□□□ -1.61
HMGB2-202ENST00000438704 PFN2P35080 140 aa5□□□□□ -1.61
HMGB2-202ENST00000438704 CAMK2N2Q96S95 79 aa5□□□□□ -1.61
HMGB2-202ENST00000438704 Q9HAA7 133 aa5□□□□□ -1.61
HMGB2-202ENST00000438704 SPCS1Q9Y6A9 102 aa5□□□□□ -1.61
HMGB2-202ENST00000438704 CSMD3Q7Z407 3707 aa4.99□□□□□ -1.61
HMGB2-202ENST00000438704 TRBV10-2A0A0K0K1G8 114 aa4.99□□□□□ -1.61
HMGB2-202ENST00000438704 USP17L23D6RBM5 183 aa4.99□□□□□ -1.61
HMGB2-202ENST00000438704 NDUFC2-KCTD14E9PQ53 114 aa4.99□□□□□ -1.61
HMGB2-202ENST00000438704 SYCNQ0VAF6 134 aa4.99□□□□□ -1.61
HMGB2-202ENST00000438704 Q6ZRU5 148 aa4.99□□□□□ -1.61
HMGB2-202ENST00000438704 FAM30AQ9NZY2 134 aa4.99□□□□□ -1.61
HMGB2-202ENST00000438704 RPL13AP40429 203 aaKnown RBP4.98□□□□□ -1.61
HMGB2-202ENST00000438704 RPL28P46779 137 aaKnown RBP4.98□□□□□ -1.61
HMGB2-202ENST00000438704 NPC2P61916 151 aa4.98□□□□□ -1.61
HMGB2-202ENST00000438704 CNBPP62633 177 aaKnown RBP4.98□□□□□ -1.61
HMGB2-202ENST00000438704 PLECQ15149 4684 aaKnown RBP4.98□□□□□ -1.61
HMGB2-202ENST00000438704 HIGD2BQ4VC39 106 aa4.98□□□□□ -1.61
HMGB2-202ENST00000438704 C14orf177Q52M58 125 aa4.98□□□□□ -1.61
HMGB2-202ENST00000438704 C9orf116Q5BN46 136 aaPredicted RBP4.98□□□□□ -1.61
HMGB2-202ENST00000438704 Q6ZRN7 208 aaPredicted RBP4.98□□□□□ -1.61
HMGB2-202ENST00000438704 LINC00337Q8N6G1 96 aa4.98□□□□□ -1.61
HMGB2-202ENST00000438704 LINC01600Q96MT4 127 aa4.98□□□□□ -1.61
HMGB2-202ENST00000438704 NAA38Q9BRA0 125 aaKnown RBP4.98□□□□□ -1.61
HMGB2-202ENST00000438704 DNAH1Q9P2D7 4330 aa4.98□□□□□ -1.61
HMGB2-202ENST00000438704 STARD9Q9P2P6 4700 aa4.98□□□□□ -1.61
HMGB2-202ENST00000438704 TRIAP1O43715 76 aa4.97□□□□□ -1.61
HMGB2-202ENST00000438704 COX6CP09669 75 aa4.97□□□□□ -1.61
HMGB2-202ENST00000438704 CASC10Q5T4H9 136 aa4.97□□□□□ -1.61
HMGB2-202ENST00000438704 Q6ZR54 194 aa4.97□□□□□ -1.61
HMGB2-202ENST00000438704 LINC00526Q96FQ7 95 aa4.97□□□□□ -1.61
HMGB2-202ENST00000438704 CARD19Q96LW7 228 aa4.97□□□□□ -1.61
HMGB2-202ENST00000438704 C3orf84H3BNL1 204 aa4.96□□□□□ -1.62
HMGB2-202ENST00000438704 M0QXV9 152 aa4.96□□□□□ -1.62
HMGB2-202ENST00000438704 VPS13DQ5THJ4 4388 aa4.95□□□□□ -1.62
HMGB2-202ENST00000438704 LRCOL1A6NCL2 159 aa4.95□□□□□ -1.62
HMGB2-202ENST00000438704 F8W1H4 67 aa4.95□□□□□ -1.62
HMGB2-202ENST00000438704 Q1RN00 199 aa4.95□□□□□ -1.62
HMGB2-202ENST00000438704 TMEM126AQ9H061 195 aa4.95□□□□□ -1.62
HMGB2-202ENST00000438704 PRO0461Q9UI25 63 aa4.95□□□□□ -1.62
HMGB2-202ENST00000438704 TENM2Q9NT68 2774 aa4.95□□□□□ -1.62
HMGB2-202ENST00000438704 IGLV5-37A0A075B6J1 123 aa4.94□□□□□ -1.62
HMGB2-202ENST00000438704 LST1O00453 97 aa4.94□□□□□ -1.62
HMGB2-202ENST00000438704 TCL1BO95988 128 aa4.94□□□□□ -1.62
HMGB2-202ENST00000438704 IGLV6-57P01721 117 aa4.94□□□□□ -1.62
HMGB2-202ENST00000438704 SCGB1C2P0DMR2 95 aa4.94□□□□□ -1.62
HMGB2-202ENST00000438704 VPREB1P12018 145 aa4.94□□□□□ -1.62
HMGB2-202ENST00000438704 PSMB2P49721 201 aa4.94□□□□□ -1.62
HMGB2-202ENST00000438704 ATXN8Q156A1 80 aa4.94□□□□□ -1.62
HMGB2-202ENST00000438704 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
HMGB2-202ENST00000438704 Q6ZRP5 223 aa4.94□□□□□ -1.62
HMGB2-202ENST00000438704 Q8NDZ9 215 aa4.94□□□□□ -1.62
HMGB2-202ENST00000438704 PKIGQ9Y2B9 76 aa4.94□□□□□ -1.62
HMGB2-202ENST00000438704 LOC107984640A0A0U1RRK4 108 aa4.93□□□□□ -1.62
HMGB2-202ENST00000438704 H0YGX0 51 aa4.93□□□□□ -1.62
HMGB2-202ENST00000438704 H3BMG7 143 aa4.93□□□□□ -1.62
HMGB2-202ENST00000438704 H7C2G1 150 aa4.93□□□□□ -1.62
HMGB2-202ENST00000438704 PSCAO43653 123 aa4.93□□□□□ -1.62
HMGB2-202ENST00000438704 WFDC2Q14508 124 aa4.93□□□□□ -1.62
HMGB2-202ENST00000438704 SMIM11BQ8TCY0 68 aa4.93□□□□□ -1.62
HMGB2-202ENST00000438704 CBY1Q9Y3M2 126 aa4.93□□□□□ -1.62
HMGB2-202ENST00000438704 A0A1B0GX51 115 aa4.92□□□□□ -1.62
HMGB2-202ENST00000438704 M0R378 163 aa4.92□□□□□ -1.62
HMGB2-202ENST00000438704 TRACP01848 142 aa4.92□□□□□ -1.62
HMGB2-202ENST00000438704 C9orf129Q5T035 196 aaKnown RBP4.92□□□□□ -1.62
HMGB2-202ENST00000438704 DNAH6Q9C0G6 4158 aa4.92□□□□□ -1.62
HMGB2-202ENST00000438704 TRBV7-6A0A0J9YX20 115 aa4.91□□□□□ -1.62
HMGB2-202ENST00000438704 LINC01620Q4KN68 170 aa4.91□□□□□ -1.62
HMGB2-202ENST00000438704 Q8N9P0 234 aaPredicted RBP4.91□□□□□ -1.62
HMGB2-202ENST00000438704 XAGE1AQ9HD64 81 aa4.91□□□□□ -1.62
HMGB2-202ENST00000438704 C16orf90A8MZG2 172 aa4.9□□□□□ -1.63
HMGB2-202ENST00000438704 H3BT86 120 aa4.9□□□□□ -1.63
HMGB2-202ENST00000438704 PRR3P79522 188 aaKnown RBP4.9□□□□□ -1.63
HMGB2-202ENST00000438704 C9orf163Q8N9P6 203 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 266 ms