RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
SMC1A-203ENST00000428014 MAP1LC3CQ9BXW4 147 aa5.63□□□□□ -1.51
SMC1A-203ENST00000428014 PSORS1C2Q9UIG4 136 aa5.63□□□□□ -1.51
SMC1A-203ENST00000428014 HERC1Q15751 4861 aa5.63□□□□□ -1.51
SMC1A-203ENST00000428014 PKHD1L1Q86WI1 4243 aa5.63□□□□□ -1.51
SMC1A-203ENST00000428014 C11orf86A6NJI1 115 aa5.62□□□□□ -1.51
SMC1A-203ENST00000428014 M0QXV9 152 aa5.62□□□□□ -1.51
SMC1A-203ENST00000428014 AKR1D1P51857 326 aa5.62□□□□□ -1.51
SMC1A-203ENST00000428014 GAGE2EQ4V326 116 aa5.62□□□□□ -1.51
SMC1A-203ENST00000428014 KRTAP7-1Q8IUC3 87 aa5.62□□□□□ -1.51
SMC1A-203ENST00000428014 GAGE2DQ9UEU5 116 aa5.62□□□□□ -1.51
SMC1A-203ENST00000428014 CHTOPQ9Y3Y2 248 aaKnown RBP5.62□□□□□ -1.51
SMC1A-203ENST00000428014 LRP1Q07954 4544 aaKnown RBP5.62□□□□□ -1.51
SMC1A-203ENST00000428014 IGLV7-43P04211 117 aa5.61□□□□□ -1.51
SMC1A-203ENST00000428014 MT1HL1P0DM35 61 aa5.61□□□□□ -1.51
SMC1A-203ENST00000428014 HERV-K104P63124 156 aa5.61□□□□□ -1.51
SMC1A-203ENST00000428014 PET117Q6UWS5 81 aa5.61□□□□□ -1.51
SMC1A-203ENST00000428014 DIRC1Q969H9 104 aa5.61□□□□□ -1.51
SMC1A-203ENST00000428014 ZNF625Q96I27 306 aaPredicted RBP5.61□□□□□ -1.51
SMC1A-203ENST00000428014 TMEM223A0PJW6 202 aa5.6□□□□□ -1.51
SMC1A-203ENST00000428014 C20orf202A1L168 122 aa5.6□□□□□ -1.51
SMC1A-203ENST00000428014 SYS1-DBNDD2H3BUS1 97 aa5.6□□□□□ -1.51
SMC1A-203ENST00000428014 SPINK8P0C7L1 97 aa5.6□□□□□ -1.51
SMC1A-203ENST00000428014 C3orf79P0CE67 100 aa5.6□□□□□ -1.51
SMC1A-203ENST00000428014 PLNP26678 52 aa5.6□□□□□ -1.51
SMC1A-203ENST00000428014 PHF5AQ7RTV0 110 aaKnown RBP5.6□□□□□ -1.51
SMC1A-203ENST00000428014 FAT3Q8TDW7 4589 aa5.6□□□□□ -1.51
SMC1A-203ENST00000428014 KRTAP10-8P60410 259 aa5.59□□□□□ -1.51
SMC1A-203ENST00000428014 KRTDAPP60985 99 aa5.59□□□□□ -1.51
SMC1A-203ENST00000428014 TMEM170BQ5T4T1 132 aa5.59□□□□□ -1.51
SMC1A-203ENST00000428014 LINC01545Q5VT33 79 aa5.59□□□□□ -1.51
SMC1A-203ENST00000428014 MRPL55Q7Z7F7 128 aaKnown RBP5.59□□□□□ -1.51
SMC1A-203ENST00000428014 ERG28Q9UKR5 140 aa5.59□□□□□ -1.51
SMC1A-203ENST00000428014 C22orf24Q9Y442 160 aa5.59□□□□□ -1.51
SMC1A-203ENST00000428014 FAM168BA1KXE4 195 aa5.58□□□□□ -1.52
SMC1A-203ENST00000428014 H0Y8G0 127 aa5.58□□□□□ -1.52
SMC1A-203ENST00000428014 H0Y9J4 135 aa5.58□□□□□ -1.52
SMC1A-203ENST00000428014 RPL24P83731 157 aaKnown RBP5.58□□□□□ -1.52
SMC1A-203ENST00000428014 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
SMC1A-203ENST00000428014 FAM19A5Q7Z5A7 132 aaPredicted RBP5.58□□□□□ -1.52
SMC1A-203ENST00000428014 IGLV1-50A0A075B6I6 118 aa5.57□□□□□ -1.52
SMC1A-203ENST00000428014 LOC107984156A0A0G2JMH3 177 aa5.57□□□□□ -1.52
SMC1A-203ENST00000428014 ZNF861PO60384 105 aa5.57□□□□□ -1.52
SMC1A-203ENST00000428014 DPM2O94777 84 aa5.57□□□□□ -1.52
SMC1A-203ENST00000428014 NMUP48645 174 aa5.57□□□□□ -1.52
SMC1A-203ENST00000428014 UBE2BP63146 152 aa5.57□□□□□ -1.52
SMC1A-203ENST00000428014 CTAG1AP78358 180 aa5.57□□□□□ -1.52
SMC1A-203ENST00000428014 ARL17AQ8IVW1 177 aa5.57□□□□□ -1.52
SMC1A-203ENST00000428014 IGKV2D-26A0A0A0MRZ7 120 aa5.56□□□□□ -1.52
SMC1A-203ENST00000428014 IGKCP01834 107 aa5.56□□□□□ -1.52
SMC1A-203ENST00000428014 PLEKHB2Q96CS7 222 aa5.56□□□□□ -1.52
SMC1A-203ENST00000428014 XAGE1AQ9HD64 81 aa5.56□□□□□ -1.52
SMC1A-203ENST00000428014 MYMXA0A1B0GTQ4 84 aa5.55□□□□□ -1.52
SMC1A-203ENST00000428014 BCE1O60756 84 aa5.55□□□□□ -1.52
SMC1A-203ENST00000428014 RPL13AP40429 203 aaKnown RBP5.55□□□□□ -1.52
SMC1A-203ENST00000428014 RPL28P46779 137 aaKnown RBP5.55□□□□□ -1.52
SMC1A-203ENST00000428014 JOSD1Q15040 202 aaPredicted RBP5.55□□□□□ -1.52
SMC1A-203ENST00000428014 SND1-IT1Q9HBX3 110 aa5.55□□□□□ -1.52
SMC1A-203ENST00000428014 SCGB1D1O95968 90 aa5.54□□□□□ -1.52
SMC1A-203ENST00000428014 VPREB1P12018 145 aa5.54□□□□□ -1.52
SMC1A-203ENST00000428014 HERVK_113P61574 105 aa5.54□□□□□ -1.52
SMC1A-203ENST00000428014 KRTAP11-1Q8IUC1 163 aa5.54□□□□□ -1.52
SMC1A-203ENST00000428014 NKAPP1Q8N9T2 125 aa5.54□□□□□ -1.52
SMC1A-203ENST00000428014 LEPROTO15243 131 aa5.53□□□□□ -1.52
SMC1A-203ENST00000428014 KRTAP13-1Q8IUC0 172 aa5.53□□□□□ -1.52
SMC1A-203ENST00000428014 LINC00167Q96N53 147 aa5.53□□□□□ -1.52
SMC1A-203ENST00000428014 PMCHL2Q9BQD1 86 aa5.53□□□□□ -1.52
SMC1A-203ENST00000428014 NDUFA12Q9UI09 145 aa5.53□□□□□ -1.52
SMC1A-203ENST00000428014 LOC105371267A0A1B0GV96 52 aa5.52□□□□□ -1.53
SMC1A-203ENST00000428014 KRTAP1-4P0C5Y4 121 aa5.52□□□□□ -1.53
SMC1A-203ENST00000428014 TNXBP22105 4242 aa5.52□□□□□ -1.53
SMC1A-203ENST00000428014 TRBV10-2A0A0K0K1G8 114 aa5.51□□□□□ -1.53
SMC1A-203ENST00000428014 HSBP1L1C9JCN9 74 aa5.51□□□□□ -1.53
SMC1A-203ENST00000428014 E9PLD3 99 aa5.51□□□□□ -1.53
SMC1A-203ENST00000428014 J3QQQ9 107 aa5.51□□□□□ -1.53
SMC1A-203ENST00000428014 PFN2P35080 140 aa5.51□□□□□ -1.53
SMC1A-203ENST00000428014 PYY3Q5JQD4 70 aa5.51□□□□□ -1.53
SMC1A-203ENST00000428014 PPDPFQ9H3Y8 114 aa5.51□□□□□ -1.53
SMC1A-203ENST00000428014 M0R378 163 aa5.5□□□□□ -1.53
SMC1A-203ENST00000428014 NDUFC2O95298 119 aa5.5□□□□□ -1.53
SMC1A-203ENST00000428014 SMIM6P0DI80 62 aa5.5□□□□□ -1.53
SMC1A-203ENST00000428014 LINC00158P58513 81 aa5.5□□□□□ -1.53
SMC1A-203ENST00000428014 FAM229BQ4G0N7 80 aa5.5□□□□□ -1.53
SMC1A-203ENST00000428014 MEIG1Q5JSS6 88 aa5.5□□□□□ -1.53
SMC1A-203ENST00000428014 SPRR1AP35321 89 aa5.49□□□□□ -1.53
SMC1A-203ENST00000428014 KRTAP9-9Q9BYP9 154 aa5.49□□□□□ -1.53
SMC1A-203ENST00000428014 KRTAP9-4Q9BYQ2 154 aa5.49□□□□□ -1.53
SMC1A-203ENST00000428014 CBY1Q9Y3M2 126 aa5.49□□□□□ -1.53
SMC1A-203ENST00000428014 TIMM17BO60830 172 aa5.48□□□□□ -1.53
SMC1A-203ENST00000428014 S100A12P80511 92 aa5.48□□□□□ -1.53
SMC1A-203ENST00000428014 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
SMC1A-203ENST00000428014 ATOH7Q8N100 152 aa5.48□□□□□ -1.53
SMC1A-203ENST00000428014 MIR7-3HGQ8N6C7 128 aa5.48□□□□□ -1.53
SMC1A-203ENST00000428014 LINC00337Q8N6G1 96 aa5.48□□□□□ -1.53
SMC1A-203ENST00000428014 VAMP8Q9BV40 100 aa5.48□□□□□ -1.53
SMC1A-203ENST00000428014 TMEM126AQ9H061 195 aa5.48□□□□□ -1.53
SMC1A-203ENST00000428014 KCNQ1DNQ9H478 68 aa5.48□□□□□ -1.53
SMC1A-203ENST00000428014 PRYO14603 147 aa5.47□□□□□ -1.53
SMC1A-203ENST00000428014 SMIM13P0DJ93 91 aa5.47□□□□□ -1.53
SMC1A-203ENST00000428014 LGALS3P17931 250 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms