RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 NAT8Q9UHE5 227 aa7.73□□□□□ -1.17
HDAC6-206ENST00000426196 COX6B2Q6YFQ2 88 aa7.72□□□□□ -1.17
HDAC6-206ENST00000426196 IGLV9-49A0A0B4J1Y8 123 aa7.71□□□□□ -1.18
HDAC6-206ENST00000426196 LINC00483Q53H64 154 aa7.71□□□□□ -1.18
HDAC6-206ENST00000426196 SSBP3-AS1Q7Z2R9 100 aa7.71□□□□□ -1.18
HDAC6-206ENST00000426196 ERG28Q9UKR5 140 aa7.71□□□□□ -1.18
HDAC6-206ENST00000426196 COX17Q14061 63 aa7.7□□□□□ -1.18
HDAC6-206ENST00000426196 Q8NDZ9 215 aa7.7□□□□□ -1.18
HDAC6-206ENST00000426196 SMCR5Q8TEV8 140 aa7.7□□□□□ -1.18
HDAC6-206ENST00000426196 TOMM6Q96B49 74 aa7.7□□□□□ -1.18
HDAC6-206ENST00000426196 NXT2Q9NPJ8 142 aaKnown RBP7.7□□□□□ -1.18
HDAC6-206ENST00000426196 H3BRM9 83 aa7.69□□□□□ -1.18
HDAC6-206ENST00000426196 GAGE2AQ6NT46 116 aa7.69□□□□□ -1.18
HDAC6-206ENST00000426196 ERASQ7Z444 233 aa7.69□□□□□ -1.18
HDAC6-206ENST00000426196 MRPL18Q9H0U6 180 aaKnown RBP7.69□□□□□ -1.18
HDAC6-206ENST00000426196 SSPOA2VEC9 5147 aa7.69□□□□□ -1.18
HDAC6-206ENST00000426196 TCTE3Q8IZS6 198 aa7.68□□□□□ -1.18
HDAC6-206ENST00000426196 SCGB3A1Q96QR1 104 aa7.68□□□□□ -1.18
HDAC6-206ENST00000426196 PRYO14603 147 aa7.67□□□□□ -1.18
HDAC6-206ENST00000426196 ETDCA0A1B0GVM5 59 aa7.66□□□□□ -1.18
HDAC6-206ENST00000426196 C9orf92A6NGG3 77 aa7.65□□□□□ -1.18
HDAC6-206ENST00000426196 CST9LQ9H4G1 147 aa7.65□□□□□ -1.18
HDAC6-206ENST00000426196 ZNF625Q96I27 306 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-206ENST00000426196 USH2AO75445 5202 aa7.64□□□□□ -1.19
HDAC6-206ENST00000426196 IGLV5-39A0A0G2JS06 123 aa7.63□□□□□ -1.19
HDAC6-206ENST00000426196 ADCYAP1P18509 176 aa7.63□□□□□ -1.19
HDAC6-206ENST00000426196 SPRR1AP35321 89 aa7.63□□□□□ -1.19
HDAC6-206ENST00000426196 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
HDAC6-206ENST00000426196 KRTAP3-2Q9BYR7 98 aa7.62□□□□□ -1.19
HDAC6-206ENST00000426196 LINC01549A6NIU2 74 aa7.61□□□□□ -1.19
HDAC6-206ENST00000426196 PMVKQ15126 192 aa7.61□□□□□ -1.19
HDAC6-206ENST00000426196 C9orf153Q5TBE3 101 aa7.61□□□□□ -1.19
HDAC6-206ENST00000426196 SFTA2Q6UW10 78 aa7.61□□□□□ -1.19
HDAC6-206ENST00000426196 KCNQ1DNQ9H478 68 aa7.61□□□□□ -1.19
HDAC6-206ENST00000426196 FCGBPQ9Y6R7 5405 aaPredicted RBP7.6□□□□□ -1.19
HDAC6-206ENST00000426196 C9JQL5 133 aa7.6□□□□□ -1.19
HDAC6-206ENST00000426196 KRTAP4-16G5E9R7 235 aaPredicted RBP7.6□□□□□ -1.19
HDAC6-206ENST00000426196 LINC00158P58513 81 aa7.59□□□□□ -1.19
HDAC6-206ENST00000426196 LIMD2Q9BT23 127 aa7.59□□□□□ -1.19
HDAC6-206ENST00000426196 NCR3O14931 201 aa7.58□□□□□ -1.2
HDAC6-206ENST00000426196 CFC1P0CG37 223 aa7.58□□□□□ -1.2
HDAC6-206ENST00000426196 S100A12P80511 92 aa7.58□□□□□ -1.2
HDAC6-206ENST00000426196 ERC2-IT1O76042 136 aa7.57□□□□□ -1.2
HDAC6-206ENST00000426196 IGLV6-57P01721 117 aa7.57□□□□□ -1.2
HDAC6-206ENST00000426196 PEA15Q15121 130 aa7.57□□□□□ -1.2
HDAC6-206ENST00000426196 IGLC3P0DOY3 106 aa7.56□□□□□ -1.2
HDAC6-206ENST00000426196 BOD1L2Q8IYS8 172 aa7.56□□□□□ -1.2
HDAC6-206ENST00000426196 TRAV9-1A0A075B6T8 112 aa7.55□□□□□ -1.2
HDAC6-206ENST00000426196 B5MCH6 92 aa7.55□□□□□ -1.2
HDAC6-206ENST00000426196 ZNF22P17026 224 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-206ENST00000426196 TRBV10-3A0A0K0K1G6 114 aa7.54□□□□□ -1.2
HDAC6-206ENST00000426196 A0A0U1RRA0 63 aa7.54□□□□□ -1.2
HDAC6-206ENST00000426196 ATP6V1G1O75348 118 aa7.54□□□□□ -1.2
HDAC6-206ENST00000426196 NDUFA6P56556 154 aa7.52□□□□□ -1.21
HDAC6-206ENST00000426196 Q9BRP9 147 aa7.52□□□□□ -1.21
HDAC6-206ENST00000426196 RPL37P61927 97 aaKnown RBP7.51□□□□□ -1.21
HDAC6-206ENST00000426196 KIAA1644Q3SXP7 199 aa7.51□□□□□ -1.21
HDAC6-206ENST00000426196 Q6ZRX8 168 aa7.5□□□□□ -1.21
HDAC6-206ENST00000426196 MACF1Q9UPN3 7388 aaKnown RBP7.49□□□□□ -1.21
HDAC6-206ENST00000426196 LINC01546A6NGU7 62 aa7.49□□□□□ -1.21
HDAC6-206ENST00000426196 TMEM170BQ5T4T1 132 aa7.49□□□□□ -1.21
HDAC6-206ENST00000426196 HRCT1Q6UXD1 115 aa7.49□□□□□ -1.21
HDAC6-206ENST00000426196 ANAPC16Q96DE5 110 aa7.49□□□□□ -1.21
HDAC6-206ENST00000426196 MT-ND4LP03901 98 aa7.48□□□□□ -1.21
HDAC6-206ENST00000426196 SMIM13P0DJ93 91 aa7.48□□□□□ -1.21
HDAC6-206ENST00000426196 Q6Q795 121 aa7.48□□□□□ -1.21
HDAC6-206ENST00000426196 FA2HQ7L5A8 372 aa7.47□□□□□ -1.21
HDAC6-206ENST00000426196 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
HDAC6-206ENST00000426196 SMCO4Q9NRQ5 59 aa7.47□□□□□ -1.21
HDAC6-206ENST00000426196 C11orf86A6NJI1 115 aa7.46□□□□□ -1.22
HDAC6-206ENST00000426196 DDTP30046 118 aa7.46□□□□□ -1.22
HDAC6-206ENST00000426196 JOSD1Q15040 202 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-206ENST00000426196 MEIG1Q5JSS6 88 aa7.46□□□□□ -1.22
HDAC6-206ENST00000426196 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
HDAC6-206ENST00000426196 SYNE2Q8WXH0 6885 aaKnown RBP7.44□□□□□ -1.22
HDAC6-206ENST00000426196 KRTAP9-8Q9BYQ0 159 aa7.44□□□□□ -1.22
HDAC6-206ENST00000426196 SLC25A34Q6PIV7 304 aa7.42□□□□□ -1.22
HDAC6-206ENST00000426196 ST20-AS1Q8NBB2 130 aa7.42□□□□□ -1.22
HDAC6-206ENST00000426196 TRBV10-2A0A0K0K1G8 114 aa7.41□□□□□ -1.22
HDAC6-206ENST00000426196 C5orf52A6NGY3 159 aa7.41□□□□□ -1.22
HDAC6-206ENST00000426196 LINC00587B1AMM8 73 aa7.41□□□□□ -1.22
HDAC6-206ENST00000426196 HERV-K104P63124 156 aa7.4□□□□□ -1.22
HDAC6-206ENST00000426196 BAGE3Q86Y29 109 aa7.4□□□□□ -1.22
HDAC6-206ENST00000426196 MAP1LC3CQ9BXW4 147 aa7.4□□□□□ -1.22
HDAC6-206ENST00000426196 CD164Q04900 197 aa7.39□□□□□ -1.23
HDAC6-206ENST00000426196 TMEM223A0PJW6 202 aa7.38□□□□□ -1.23
HDAC6-206ENST00000426196 S100A7L2Q5SY68 101 aa7.38□□□□□ -1.23
HDAC6-206ENST00000426196 SPANXB1Q9NS25 103 aaPredicted RBP7.38□□□□□ -1.23
HDAC6-206ENST00000426196 LAMTOR3Q9UHA4 124 aa7.38□□□□□ -1.23
HDAC6-206ENST00000426196 TRAV23DV6A0A075B6W5 121 aa7.37□□□□□ -1.23
HDAC6-206ENST00000426196 A0A096LNJ9 63 aa7.36□□□□□ -1.23
HDAC6-206ENST00000426196 H7C2G1 150 aa7.36□□□□□ -1.23
HDAC6-206ENST00000426196 HBDP02042 147 aa7.36□□□□□ -1.23
HDAC6-206ENST00000426196 SPRR1BP22528 89 aa7.36□□□□□ -1.23
HDAC6-206ENST00000426196 C1orf195Q5TG92 126 aa7.36□□□□□ -1.23
HDAC6-206ENST00000426196 Q5XG85 94 aa7.35□□□□□ -1.23
HDAC6-206ENST00000426196 CHTOPQ9Y3Y2 248 aaKnown RBP7.35□□□□□ -1.23
HDAC6-206ENST00000426196 LOC107984156A0A0G2JMH3 177 aa7.34□□□□□ -1.23
HDAC6-206ENST00000426196 ZNF73O43830 326 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-206ENST00000426196 HINT1P49773 126 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms