RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 KRTAP13-2Q52LG2 175 aa9.45□□□□□ -0.9
COL18A1-205ENST00000423214 LINC00304Q8N9R0 145 aa9.45□□□□□ -0.9
COL18A1-205ENST00000423214 ERG28Q9UKR5 140 aa9.45□□□□□ -0.9
COL18A1-205ENST00000423214 RETNLBQ9BQ08 111 aa9.44□□□□□ -0.9
COL18A1-205ENST00000423214 IGKV2D-26A0A0A0MRZ7 120 aa9.43□□□□□ -0.9
COL18A1-205ENST00000423214 TRAV12-1A0A0B4J245 112 aa9.43□□□□□ -0.9
COL18A1-205ENST00000423214 PRLHP81277 87 aa9.43□□□□□ -0.9
COL18A1-205ENST00000423214 SND1-IT1Q9HBX3 110 aa9.43□□□□□ -0.9
COL18A1-205ENST00000423214 TMEM223A0PJW6 202 aa9.42□□□□□ -0.9
COL18A1-205ENST00000423214 H0Y8G0 127 aa9.42□□□□□ -0.9
COL18A1-205ENST00000423214 FAM19A1Q7Z5A9 133 aa9.42□□□□□ -0.9
COL18A1-205ENST00000423214 SERF1AO75920 110 aa9.41□□□□□ -0.9
COL18A1-205ENST00000423214 LINC00310P59036 64 aa9.41□□□□□ -0.9
COL18A1-205ENST00000423214 RPL24P83731 157 aaKnown RBP9.41□□□□□ -0.9
COL18A1-205ENST00000423214 A0A0U1RRA0 63 aa9.4□□□□□ -0.9
COL18A1-205ENST00000423214 COLCA2A8K830 154 aa9.4□□□□□ -0.9
COL18A1-205ENST00000423214 VPREB1P12018 145 aa9.4□□□□□ -0.9
COL18A1-205ENST00000423214 COX17Q14061 63 aa9.4□□□□□ -0.9
COL18A1-205ENST00000423214 TMEM126AQ9H061 195 aa9.4□□□□□ -0.9
COL18A1-205ENST00000423214 TMEM238C9JI98 176 aa9.39□□□□□ -0.91
COL18A1-205ENST00000423214 LINC00158P58513 81 aa9.39□□□□□ -0.91
COL18A1-205ENST00000423214 LEPROTL1O95214 131 aa9.38□□□□□ -0.91
COL18A1-205ENST00000423214 Q8NDZ9 215 aa9.38□□□□□ -0.91
COL18A1-205ENST00000423214 CDIP1Q9H305 208 aa9.38□□□□□ -0.91
COL18A1-205ENST00000423214 FABP4P15090 132 aa9.37□□□□□ -0.91
COL18A1-205ENST00000423214 SFTA2Q6UW10 78 aa9.37□□□□□ -0.91
COL18A1-205ENST00000423214 TPRXLQ17RH7 258 aa9.36□□□□□ -0.91
COL18A1-205ENST00000423214 M0R378 163 aa9.35□□□□□ -0.91
COL18A1-205ENST00000423214 SMIM13P0DJ93 91 aa9.35□□□□□ -0.91
COL18A1-205ENST00000423214 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
COL18A1-205ENST00000423214 IGLV7-46A0A075B6I9 117 aa9.34□□□□□ -0.91
COL18A1-205ENST00000423214 CTAG1AP78358 180 aa9.34□□□□□ -0.91
COL18A1-205ENST00000423214 MEIG1Q5JSS6 88 aa9.33□□□□□ -0.92
COL18A1-205ENST00000423214 C3orf22Q8N5N4 141 aa9.33□□□□□ -0.92
COL18A1-205ENST00000423214 PMCHL2Q9BQD1 86 aa9.33□□□□□ -0.92
COL18A1-205ENST00000423214 ATP6V1G1O75348 118 aa9.32□□□□□ -0.92
COL18A1-205ENST00000423214 PLEKHB2Q96CS7 222 aa9.32□□□□□ -0.92
COL18A1-205ENST00000423214 NDUFA12Q9UI09 145 aa9.32□□□□□ -0.92
COL18A1-205ENST00000423214 HSPB8Q9UJY1 196 aa9.32□□□□□ -0.92
COL18A1-205ENST00000423214 TSPEAR-AS2P59090 65 aa9.3□□□□□ -0.92
COL18A1-205ENST00000423214 MIR7-3HGQ8N6C7 128 aa9.3□□□□□ -0.92
COL18A1-205ENST00000423214 KRTAP9-2Q9BYQ4 174 aa9.3□□□□□ -0.92
COL18A1-205ENST00000423214 ZNF706Q9Y5V0 76 aaPredicted RBP9.3□□□□□ -0.92
COL18A1-205ENST00000423214 FAT4Q6V0I7 4981 aa9.3□□□□□ -0.92
COL18A1-205ENST00000423214 MUC17Q685J3 4493 aa9.3□□□□□ -0.92
COL18A1-205ENST00000423214 HERV-K104P63124 156 aa9.29□□□□□ -0.92
COL18A1-205ENST00000423214 MYMXA0A1B0GTQ4 84 aa9.28□□□□□ -0.92
COL18A1-205ENST00000423214 LEPROTO15243 131 aa9.28□□□□□ -0.92
COL18A1-205ENST00000423214 DPM2O94777 84 aa9.28□□□□□ -0.92
COL18A1-205ENST00000423214 PLNP26678 52 aa9.28□□□□□ -0.92
COL18A1-205ENST00000423214 LCE2AQ5TA79 106 aaPredicted RBP9.28□□□□□ -0.92
COL18A1-205ENST00000423214 SPAG11AQ6PDA7 123 aa9.28□□□□□ -0.92
COL18A1-205ENST00000423214 BOD1L2Q8IYS8 172 aa9.28□□□□□ -0.92
COL18A1-205ENST00000423214 IGKCP01834 107 aa9.27□□□□□ -0.93
COL18A1-205ENST00000423214 SPRR4Q96PI1 79 aa9.27□□□□□ -0.93
COL18A1-205ENST00000423214 PPDPFQ9H3Y8 114 aa9.27□□□□□ -0.93
COL18A1-205ENST00000423214 NCR3O14931 201 aa9.26□□□□□ -0.93
COL18A1-205ENST00000423214 HIST1H2BKO60814 126 aa9.26□□□□□ -0.93
COL18A1-205ENST00000423214 HIST1H2BJP06899 126 aa9.26□□□□□ -0.93
COL18A1-205ENST00000423214 HIST1H2BOP23527 126 aa9.26□□□□□ -0.93
COL18A1-205ENST00000423214 HIST1H2BBP33778 126 aa9.26□□□□□ -0.93
COL18A1-205ENST00000423214 HIST1H2BDP58876 126 aa9.26□□□□□ -0.93
COL18A1-205ENST00000423214 HIST1H2BCP62807 126 aa9.26□□□□□ -0.93
COL18A1-205ENST00000423214 HIST2H2BEQ16778 126 aa9.26□□□□□ -0.93
COL18A1-205ENST00000423214 C4orf48Q5BLP8 95 aa9.26□□□□□ -0.93
COL18A1-205ENST00000423214 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.26□□□□□ -0.93
COL18A1-205ENST00000423214 HIST1H2BHQ93079 126 aa9.26□□□□□ -0.93
COL18A1-205ENST00000423214 HIST1H2BNQ99877 126 aa9.26□□□□□ -0.93
COL18A1-205ENST00000423214 HIST1H2BMQ99879 126 aa9.26□□□□□ -0.93
COL18A1-205ENST00000423214 MAP1LC3CQ9BXW4 147 aa9.26□□□□□ -0.93
COL18A1-205ENST00000423214 LINC00587B1AMM8 73 aa9.25□□□□□ -0.93
COL18A1-205ENST00000423214 J3QQQ9 107 aa9.25□□□□□ -0.93
COL18A1-205ENST00000423214 PRYO14603 147 aa9.25□□□□□ -0.93
COL18A1-205ENST00000423214 DAND5Q8N907 189 aa9.25□□□□□ -0.93
COL18A1-205ENST00000423214 HERVK_113P61574 105 aa9.24□□□□□ -0.93
COL18A1-205ENST00000423214 FP248Q71RG6 208 aaPredicted RBP9.23□□□□□ -0.93
COL18A1-205ENST00000423214 ETDCA0A1B0GVM5 59 aa9.22□□□□□ -0.93
COL18A1-205ENST00000423214 LGALS3P17931 250 aaKnown RBP9.22□□□□□ -0.93
COL18A1-205ENST00000423214 LINC00337Q8N6G1 96 aa9.21□□□□□ -0.94
COL18A1-205ENST00000423214 Q8NBF4 154 aa9.21□□□□□ -0.94
COL18A1-205ENST00000423214 SYS1-DBNDD2H3BUS1 97 aa9.2□□□□□ -0.94
COL18A1-205ENST00000423214 S100A12P80511 92 aa9.2□□□□□ -0.94
COL18A1-205ENST00000423214 TRBV10-3A0A0K0K1G6 114 aa9.19□□□□□ -0.94
COL18A1-205ENST00000423214 NMUP48645 174 aa9.19□□□□□ -0.94
COL18A1-205ENST00000423214 S100A1P23297 94 aa9.18□□□□□ -0.94
COL18A1-205ENST00000423214 SMCR5Q8TEV8 140 aa9.18□□□□□ -0.94
COL18A1-205ENST00000423214 E9PLD3 99 aa9.17□□□□□ -0.94
COL18A1-205ENST00000423214 SPRR1AP35321 89 aa9.17□□□□□ -0.94
COL18A1-205ENST00000423214 NPC2P61916 151 aa9.17□□□□□ -0.94
COL18A1-205ENST00000423214 KCNQ1DNQ9H478 68 aa9.17□□□□□ -0.94
COL18A1-205ENST00000423214 LOC107984156A0A0G2JMH3 177 aa9.16□□□□□ -0.94
COL18A1-205ENST00000423214 A0A0J9YXY3 114 aa9.16□□□□□ -0.94
COL18A1-205ENST00000423214 SPINK1P00995 79 aa9.16□□□□□ -0.94
COL18A1-205ENST00000423214 ARL17AQ8IVW1 177 aa9.16□□□□□ -0.94
COL18A1-205ENST00000423214 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.94
COL18A1-205ENST00000423214 LINC01545Q5VT33 79 aa9.15□□□□□ -0.94
COL18A1-205ENST00000423214 MIEN1Q9BRT3 115 aa9.15□□□□□ -0.94
COL18A1-205ENST00000423214 KRTAP4-16G5E9R7 235 aaPredicted RBP9.14□□□□□ -0.95
COL18A1-205ENST00000423214 EIF4EBP3O60516 100 aaPredicted RBP9.14□□□□□ -0.95
COL18A1-205ENST00000423214 DDTP30046 118 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms