RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 LINC01006Q8NI28 216 aa11.33□□□□□ -0.6
NPC1L1-203ENST00000423141 IGHV4-28A0A0C4DH34 117 aa11.33□□□□□ -0.6
NPC1L1-203ENST00000423141 IGLV1-51P01701 117 aa11.33□□□□□ -0.6
NPC1L1-203ENST00000423141 FLNAP21333 2647 aaKnown RBP11.33□□□□□ -0.6
NPC1L1-203ENST00000423141 EPM2AB3EWF7 344 aa11.32□□□□□ -0.6
NPC1L1-203ENST00000423141 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
NPC1L1-203ENST00000423141 SCXQ7RTU7 201 aa11.32□□□□□ -0.6
NPC1L1-203ENST00000423141 ANGP03950 147 aaKnown RBP11.31□□□□□ -0.6
NPC1L1-203ENST00000423141 CMC4P56277 68 aaPredicted RBP11.31□□□□□ -0.6
NPC1L1-203ENST00000423141 KLKP1Q107X0 134 aa11.3□□□□□ -0.6
NPC1L1-203ENST00000423141 SERP1Q9Y6X1 66 aa11.3□□□□□ -0.6
NPC1L1-203ENST00000423141 REG3AQ06141 175 aa11.3□□□□□ -0.6
NPC1L1-203ENST00000423141 LINC00612Q8N6U2 182 aa11.29□□□□□ -0.6
NPC1L1-203ENST00000423141 F8WEM9 126 aa11.28□□□□□ -0.6
NPC1L1-203ENST00000423141 PRO0255Q9UI72 69 aa11.28□□□□□ -0.6
NPC1L1-203ENST00000423141 TM2D3Q9BRN9 247 aa11.28□□□□□ -0.6
NPC1L1-203ENST00000423141 ACANP16112 2415 aa11.28□□□□□ -0.6
NPC1L1-203ENST00000423141 IGLV6-57P01721 117 aa11.27□□□□□ -0.6
NPC1L1-203ENST00000423141 BCE1O60756 84 aa11.26□□□□□ -0.61
NPC1L1-203ENST00000423141 MUC7Q8TAX7 377 aa11.26□□□□□ -0.61
NPC1L1-203ENST00000423141 DEFB113Q30KQ7 82 aa11.26□□□□□ -0.61
NPC1L1-203ENST00000423141 LINC00336Q6ZUF6 198 aa11.26□□□□□ -0.61
NPC1L1-203ENST00000423141 DEFB4AO15263 64 aa11.25□□□□□ -0.61
NPC1L1-203ENST00000423141 SPAG11BQ08648 103 aa11.25□□□□□ -0.61
NPC1L1-203ENST00000423141 CYSRT1A8MQ03 144 aa11.24□□□□□ -0.61
NPC1L1-203ENST00000423141 CXCL6P80162 114 aa11.24□□□□□ -0.61
NPC1L1-203ENST00000423141 C9orf66Q5T8R8 295 aa11.24□□□□□ -0.61
NPC1L1-203ENST00000423141 FP248Q71RG6 208 aaPredicted RBP11.24□□□□□ -0.61
NPC1L1-203ENST00000423141 X6R8D5 127 aa11.24□□□□□ -0.61
NPC1L1-203ENST00000423141 WFDC11Q8NEX6 87 aa11.24□□□□□ -0.61
NPC1L1-203ENST00000423141 XAGE1AQ9HD64 81 aa11.23□□□□□ -0.61
NPC1L1-203ENST00000423141 VWFP04275 2813 aa11.23□□□□□ -0.61
NPC1L1-203ENST00000423141 KRTAP1-3Q8IUG1 177 aa11.23□□□□□ -0.61
NPC1L1-203ENST00000423141 UBR5O95071 2799 aaPredicted RBP11.22□□□□□ -0.61
NPC1L1-203ENST00000423141 PRB1P04280 392 aa11.22□□□□□ -0.61
NPC1L1-203ENST00000423141 C16orf95Q9H693 158 aa11.22□□□□□ -0.61
NPC1L1-203ENST00000423141 TRBV7-4A0A0J9YYF1 115 aa11.21□□□□□ -0.62
NPC1L1-203ENST00000423141 LINC00474Q9P2X8 69 aa11.2□□□□□ -0.62
NPC1L1-203ENST00000423141 PDE6GP18545 87 aa11.2□□□□□ -0.62
NPC1L1-203ENST00000423141 Q8N9L7 120 aa11.2□□□□□ -0.62
NPC1L1-203ENST00000423141 DIRC1Q969H9 104 aa11.19□□□□□ -0.62
NPC1L1-203ENST00000423141 ANK3Q12955 4377 aaKnown RBP11.19□□□□□ -0.62
NPC1L1-203ENST00000423141 A0A0J9YWU9 116 aa11.19□□□□□ -0.62
NPC1L1-203ENST00000423141 IGHV4-30-4P0DP06 118 aa11.19□□□□□ -0.62
NPC1L1-203ENST00000423141 MRAPQ8TCY5 172 aa11.18□□□□□ -0.62
NPC1L1-203ENST00000423141 TRBV7-6A0A0J9YX20 115 aa11.17□□□□□ -0.62
NPC1L1-203ENST00000423141 ZNF73O43830 326 aaPredicted RBP11.17□□□□□ -0.62
NPC1L1-203ENST00000423141 NREPQ16612 68 aa11.17□□□□□ -0.62
NPC1L1-203ENST00000423141 SMIM26A0A096LP01 95 aa11.16□□□□□ -0.62
NPC1L1-203ENST00000423141 MIFP14174 115 aa11.16□□□□□ -0.62
NPC1L1-203ENST00000423141 C6orf48Q9UBA6 75 aa11.16□□□□□ -0.62
NPC1L1-203ENST00000423141 PRO0628Q9UI54 55 aa11.15□□□□□ -0.62
NPC1L1-203ENST00000423141 COX7BP24311 80 aa11.15□□□□□ -0.63
NPC1L1-203ENST00000423141 KLK12Q9UKR0 248 aa11.15□□□□□ -0.63
NPC1L1-203ENST00000423141 BPY2O14599 106 aa11.14□□□□□ -0.63
NPC1L1-203ENST00000423141 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.14□□□□□ -0.63
NPC1L1-203ENST00000423141 TMEM254Q8TBM7 123 aa11.13□□□□□ -0.63
NPC1L1-203ENST00000423141 ELOF1P60002 83 aaKnown RBP11.13□□□□□ -0.63
NPC1L1-203ENST00000423141 DEFB135Q30KP9 77 aa11.13□□□□□ -0.63
NPC1L1-203ENST00000423141 HIVEP2P31629 2446 aa11.12□□□□□ -0.63
NPC1L1-203ENST00000423141 CELA1Q9UNI1 258 aa11.11□□□□□ -0.63
NPC1L1-203ENST00000423141 USP24Q9UPU5 2620 aa11.1□□□□□ -0.63
NPC1L1-203ENST00000423141 LYRM9A8MSI8 78 aa11.1□□□□□ -0.63
NPC1L1-203ENST00000423141 H3BQ85 93 aa11.1□□□□□ -0.63
NPC1L1-203ENST00000423141 NDUFC1O43677 76 aa11.1□□□□□ -0.63
NPC1L1-203ENST00000423141 FAM229BQ4G0N7 80 aa11.1□□□□□ -0.63
NPC1L1-203ENST00000423141 HTN3P15516 51 aa11.1□□□□□ -0.63
NPC1L1-203ENST00000423141 DAD1P61803 113 aa11.09□□□□□ -0.63
NPC1L1-203ENST00000423141 GVQW2A0A096LPI5 108 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-203ENST00000423141 IGKV4-1P06312 121 aa11.08□□□□□ -0.64
NPC1L1-203ENST00000423141 PRR34Q9NV39 138 aa11.08□□□□□ -0.64
NPC1L1-203ENST00000423141 HIGD2BQ4VC39 106 aa11.07□□□□□ -0.64
NPC1L1-203ENST00000423141 C1orf43Q9BWL3 253 aa11.07□□□□□ -0.64
NPC1L1-203ENST00000423141 VPREB1P12018 145 aa11.07□□□□□ -0.64
NPC1L1-203ENST00000423141 KRTAP10-3P60369 221 aa11.05□□□□□ -0.64
NPC1L1-203ENST00000423141 LELP1Q5T871 98 aa11.05□□□□□ -0.64
NPC1L1-203ENST00000423141 C3orf84H3BNL1 204 aa11.05□□□□□ -0.64
NPC1L1-203ENST00000423141 OCR1Q9BZK8 76 aa11.04□□□□□ -0.64
NPC1L1-203ENST00000423141 PKIGQ9Y2B9 76 aa11.04□□□□□ -0.64
NPC1L1-203ENST00000423141 LINC00528Q8N1L1 170 aa11.04□□□□□ -0.64
NPC1L1-203ENST00000423141 MPLKIPQ8TAP9 179 aa11.04□□□□□ -0.64
NPC1L1-203ENST00000423141 HIVEP1P15822 2718 aa11.03□□□□□ -0.64
NPC1L1-203ENST00000423141 ATP5EP56381 51 aaPredicted RBP11.03□□□□□ -0.64
NPC1L1-203ENST00000423141 UNC79Q9P2D8 2635 aa11.03□□□□□ -0.64
NPC1L1-203ENST00000423141 A0A0U1RQV1 116 aa11.02□□□□□ -0.65
NPC1L1-203ENST00000423141 PRYO14603 147 aa11.01□□□□□ -0.65
NPC1L1-203ENST00000423141 KRTAP1-1Q07627 177 aa11.01□□□□□ -0.65
NPC1L1-203ENST00000423141 BRK1Q8WUW1 75 aa11.01□□□□□ -0.65
NPC1L1-203ENST00000423141 CAMK2N2Q96S95 79 aa11.01□□□□□ -0.65
NPC1L1-203ENST00000423141 ERC2-IT1O76042 136 aa11.01□□□□□ -0.65
NPC1L1-203ENST00000423141 HIGD2AQ9BW72 106 aa11.01□□□□□ -0.65
NPC1L1-203ENST00000423141 M0R378 163 aa10.99□□□□□ -0.65
NPC1L1-203ENST00000423141 Q6ZRU5 148 aa10.99□□□□□ -0.65
NPC1L1-203ENST00000423141 ITPR2Q14571 2701 aa10.99□□□□□ -0.65
NPC1L1-203ENST00000423141 Q8NAQ8 132 aa10.98□□□□□ -0.65
NPC1L1-203ENST00000423141 DEFB105AQ8NG35 78 aa10.98□□□□□ -0.65
NPC1L1-203ENST00000423141 PKD1L1Q8TDX9 2849 aa10.97□□□□□ -0.65
NPC1L1-203ENST00000423141 TENM1Q9UKZ4 2725 aa10.97□□□□□ -0.65
NPC1L1-203ENST00000423141 PDZD2O15018 2839 aa10.97□□□□□ -0.65
NPC1L1-203ENST00000423141 FUSP35637 526 aaKnown RBP eCLIP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms