RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 DEFB131BA0A096LNP1 70 aa12.66□□□□□ -0.38
CROCCP3-202ENST00000420820 Q6Q795 121 aa12.66□□□□□ -0.38
CROCCP3-202ENST00000420820 SDIM1Q6ZPB5 146 aa12.65□□□□□ -0.38
CROCCP3-202ENST00000420820 NCR3O14931 201 aa12.64□□□□□ -0.39
CROCCP3-202ENST00000420820 LINC01556Q5JQF7 62 aa12.64□□□□□ -0.39
CROCCP3-202ENST00000420820 C9orf129Q5T035 196 aaKnown RBP12.64□□□□□ -0.39
CROCCP3-202ENST00000420820 MDFIQ99750 246 aa12.64□□□□□ -0.39
CROCCP3-202ENST00000420820 GAGE2BQ13066 116 aa12.62□□□□□ -0.39
CROCCP3-202ENST00000420820 GAGE2EQ4V326 116 aa12.62□□□□□ -0.39
CROCCP3-202ENST00000420820 Q8N814 137 aa12.62□□□□□ -0.39
CROCCP3-202ENST00000420820 GAGE2DQ9UEU5 116 aa12.62□□□□□ -0.39
CROCCP3-202ENST00000420820 IGLV6-57P01721 117 aa12.62□□□□□ -0.39
CROCCP3-202ENST00000420820 TTC32Q5I0X7 151 aa12.62□□□□□ -0.39
CROCCP3-202ENST00000420820 NOTCH1P46531 2555 aa12.61□□□□□ -0.39
CROCCP3-202ENST00000420820 A0A1B0GV72 72 aa12.61□□□□□ -0.39
CROCCP3-202ENST00000420820 SLPIP03973 132 aa12.61□□□□□ -0.39
CROCCP3-202ENST00000420820 C15orf56Q8N910 161 aa12.61□□□□□ -0.39
CROCCP3-202ENST00000420820 ORMDL1Q9P0S3 153 aa12.61□□□□□ -0.39
CROCCP3-202ENST00000420820 C6orf99Q4VX62 202 aa12.6□□□□□ -0.39
CROCCP3-202ENST00000420820 S100A7L2Q5SY68 101 aa12.6□□□□□ -0.39
CROCCP3-202ENST00000420820 ZNF561-AS1K7EIQ3 104 aa12.59□□□□□ -0.39
CROCCP3-202ENST00000420820 SMCR5Q8TEV8 140 aa12.59□□□□□ -0.39
CROCCP3-202ENST00000420820 C2orf48Q96LS8 159 aa12.58□□□□□ -0.39
CROCCP3-202ENST00000420820 TRBV7-7A0A0K0K1E9 115 aa12.58□□□□□ -0.4
CROCCP3-202ENST00000420820 HIGD2BQ4VC39 106 aa12.58□□□□□ -0.4
CROCCP3-202ENST00000420820 TM2D3Q9BRN9 247 aa12.58□□□□□ -0.4
CROCCP3-202ENST00000420820 HUWE1Q7Z6Z7 4374 aaKnown RBP12.58□□□□□ -0.4
CROCCP3-202ENST00000420820 DNAH10OSP0CZ25 163 aa12.57□□□□□ -0.4
CROCCP3-202ENST00000420820 CAMK2N2Q96S95 79 aa12.57□□□□□ -0.4
CROCCP3-202ENST00000420820 LINC00575Q6W349 94 aa12.56□□□□□ -0.4
CROCCP3-202ENST00000420820 RPL18AQ02543 176 aaKnown RBP12.56□□□□□ -0.4
CROCCP3-202ENST00000420820 C1orf43Q9BWL3 253 aa12.56□□□□□ -0.4
CROCCP3-202ENST00000420820 TRAV10A0A0B4J240 114 aa12.54□□□□□ -0.4
CROCCP3-202ENST00000420820 F8WDY8 70 aa12.54□□□□□ -0.4
CROCCP3-202ENST00000420820 Q6ZRU5 148 aa12.54□□□□□ -0.4
CROCCP3-202ENST00000420820 LINC00643Q86TS7 51 aa12.54□□□□□ -0.4
CROCCP3-202ENST00000420820 XAGE1AQ9HD64 81 aa12.54□□□□□ -0.4
CROCCP3-202ENST00000420820 C14orf132Q9NPU4 83 aa12.54□□□□□ -0.4
CROCCP3-202ENST00000420820 NBEAL1Q6ZS30 2694 aa12.54□□□□□ -0.4
CROCCP3-202ENST00000420820 GAGE2AQ6NT46 116 aa12.54□□□□□ -0.4
CROCCP3-202ENST00000420820 MGAM2Q2M2H8 2515 aa12.53□□□□□ -0.4
CROCCP3-202ENST00000420820 K7EIL1 84 aa12.52□□□□□ -0.4
CROCCP3-202ENST00000420820 TMEM256-PLSCR3K7ERE1 68 aa12.52□□□□□ -0.4
CROCCP3-202ENST00000420820 DNAH1Q9P2D7 4330 aa12.52□□□□□ -0.4
CROCCP3-202ENST00000420820 KRTAP21-3Q3LHN1 58 aa12.52□□□□□ -0.41
CROCCP3-202ENST00000420820 TRBV10-3A0A0K0K1G6 114 aa12.51□□□□□ -0.41
CROCCP3-202ENST00000420820 NDUFC2-KCTD14E9PQ53 114 aa12.51□□□□□ -0.41
CROCCP3-202ENST00000420820 PRB2P02812 416 aaPredicted RBP12.51□□□□□ -0.41
CROCCP3-202ENST00000420820 VPREB1P12018 145 aa12.51□□□□□ -0.41
CROCCP3-202ENST00000420820 NDUFV3P56181 108 aaKnown RBP12.51□□□□□ -0.41
CROCCP3-202ENST00000420820 IMUPQ9GZP8 106 aa12.51□□□□□ -0.41
CROCCP3-202ENST00000420820 IGKV2D-24A0A075B6R9 120 aa12.5□□□□□ -0.41
CROCCP3-202ENST00000420820 NHLRC4P0CG21 123 aaPredicted RBP12.5□□□□□ -0.41
CROCCP3-202ENST00000420820 JMJD7-PLA2G4BH0Y9G9 81 aa12.49□□□□□ -0.41
CROCCP3-202ENST00000420820 ANAPC13Q9BS18 74 aa12.49□□□□□ -0.41
CROCCP3-202ENST00000420820 LINC00588Q9Y4M8 146 aa12.49□□□□□ -0.41
CROCCP3-202ENST00000420820 TRAV23DV6A0A075B6W5 121 aa12.48□□□□□ -0.41
CROCCP3-202ENST00000420820 hADV29S1A0JD25 119 aa12.48□□□□□ -0.41
CROCCP3-202ENST00000420820 CCKP06307 115 aa12.45□□□□□ -0.42
CROCCP3-202ENST00000420820 TRBV7-6A0A0J9YX20 115 aa12.45□□□□□ -0.42
CROCCP3-202ENST00000420820 M0R378 163 aa12.45□□□□□ -0.42
CROCCP3-202ENST00000420820 SYCNQ0VAF6 134 aa12.45□□□□□ -0.42
CROCCP3-202ENST00000420820 Q6ZRP5 223 aa12.45□□□□□ -0.42
CROCCP3-202ENST00000420820 DIRC1Q969H9 104 aa12.45□□□□□ -0.42
CROCCP3-202ENST00000420820 ZNF73O43830 326 aaPredicted RBP12.43□□□□□ -0.42
CROCCP3-202ENST00000420820 LINC00846Q9NV44 126 aa12.43□□□□□ -0.42
CROCCP3-202ENST00000420820 MRAPQ8TCY5 172 aa12.43□□□□□ -0.42
CROCCP3-202ENST00000420820 ELOF1P60002 83 aaKnown RBP12.41□□□□□ -0.42
CROCCP3-202ENST00000420820 H3BQ85 93 aa12.4□□□□□ -0.42
CROCCP3-202ENST00000420820 UPK3BQ9BT76 320 aa12.4□□□□□ -0.42
CROCCP3-202ENST00000420820 TLX1NBP0CAT3 122 aa12.39□□□□□ -0.43
CROCCP3-202ENST00000420820 COX7BP24311 80 aa12.39□□□□□ -0.43
CROCCP3-202ENST00000420820 DNHD1Q96M86 4753 aa12.38□□□□□ -0.43
CROCCP3-202ENST00000420820 Q6ZQY7 126 aa12.38□□□□□ -0.43
CROCCP3-202ENST00000420820 Q6JHZ5 121 aa12.37□□□□□ -0.43
CROCCP3-202ENST00000420820 CASC10Q5T4H9 136 aa12.36□□□□□ -0.43
CROCCP3-202ENST00000420820 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.36□□□□□ -0.43
CROCCP3-202ENST00000420820 LOC110117498A0A087WWA1 95 aa12.35□□□□□ -0.43
CROCCP3-202ENST00000420820 DNAH9Q9NYC9 4486 aa12.35□□□□□ -0.43
CROCCP3-202ENST00000420820 USP17L23D6RBM5 183 aa12.35□□□□□ -0.43
CROCCP3-202ENST00000420820 PLA2G2DQ9UNK4 145 aa12.35□□□□□ -0.43
CROCCP3-202ENST00000420820 RBM3P98179 157 aaKnown RBP12.34□□□□□ -0.43
CROCCP3-202ENST00000420820 LINC00528Q8N1L1 170 aa12.34□□□□□ -0.43
CROCCP3-202ENST00000420820 FAM236AA0A1B0GUQ0 79 aa12.33□□□□□ -0.44
CROCCP3-202ENST00000420820 FAM236BA0A1B0GV22 79 aa12.33□□□□□ -0.44
CROCCP3-202ENST00000420820 Q6ZQT0 140 aa12.33□□□□□ -0.44
CROCCP3-202ENST00000420820 RMI2Q96E14 147 aa12.33□□□□□ -0.44
CROCCP3-202ENST00000420820 SERTAD4-AS1Q5TG53 156 aa12.31□□□□□ -0.44
CROCCP3-202ENST00000420820 KCNQ1DNQ9H478 68 aa12.31□□□□□ -0.44
CROCCP3-202ENST00000420820 LAMTOR3Q9UHA4 124 aa12.31□□□□□ -0.44
CROCCP3-202ENST00000420820 HIST1H4AP62805 103 aaKnown RBP12.3□□□□□ -0.44
CROCCP3-202ENST00000420820 DYNC2H1Q8NCM8 4307 aaKnown RBP12.29□□□□□ -0.44
CROCCP3-202ENST00000420820 IGLV5-37A0A075B6J1 123 aa12.29□□□□□ -0.44
CROCCP3-202ENST00000420820 GHRHP01286 108 aa12.29□□□□□ -0.44
CROCCP3-202ENST00000420820 C7orf33Q8WU49 177 aa12.29□□□□□ -0.44
CROCCP3-202ENST00000420820 CCDC179H3BU77 68 aa12.28□□□□□ -0.44
CROCCP3-202ENST00000420820 IGKV3D-7A0A0C4DH55 119 aa12.27□□□□□ -0.44
CROCCP3-202ENST00000420820 NKAPP1Q8N9T2 125 aa12.27□□□□□ -0.45
CROCCP3-202ENST00000420820 PDE6GP18545 87 aa12.26□□□□□ -0.45
CROCCP3-202ENST00000420820 DSCR8Q96T75 97 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms