RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
SSBP3-206ENST00000420121 C18orf32Q8TCD1 76 aa6.6□□□□□ -1.35
SSBP3-206ENST00000420121 IGLV5-39A0A0G2JS06 123 aa6.59□□□□□ -1.35
SSBP3-206ENST00000420121 ZNF861PO60384 105 aa6.59□□□□□ -1.35
SSBP3-206ENST00000420121 SCGB1D1O95968 90 aa6.59□□□□□ -1.35
SSBP3-206ENST00000420121 IGLC3P0DOY3 106 aa6.59□□□□□ -1.35
SSBP3-206ENST00000420121 MRPL55Q7Z7F7 128 aaKnown RBP6.59□□□□□ -1.35
SSBP3-206ENST00000420121 NUPR1O60356 82 aa6.58□□□□□ -1.36
SSBP3-206ENST00000420121 LINC00167Q96N53 147 aa6.58□□□□□ -1.36
SSBP3-206ENST00000420121 SMCO4Q9NRQ5 59 aa6.58□□□□□ -1.36
SSBP3-206ENST00000420121 IGLV5-37A0A075B6J1 123 aa6.57□□□□□ -1.36
SSBP3-206ENST00000420121 ZNF22P17026 224 aaPredicted RBP6.57□□□□□ -1.36
SSBP3-206ENST00000420121 RAB5BP61020 215 aa6.56□□□□□ -1.36
SSBP3-206ENST00000420121 PMCHL1Q16048 86 aa6.56□□□□□ -1.36
SSBP3-206ENST00000420121 TRAPPC1Q9Y5R8 145 aa6.56□□□□□ -1.36
SSBP3-206ENST00000420121 RPL37AP8A6NKH3 93 aa6.55□□□□□ -1.36
SSBP3-206ENST00000420121 BCE1O60756 84 aa6.55□□□□□ -1.36
SSBP3-206ENST00000420121 HBDP02042 147 aa6.55□□□□□ -1.36
SSBP3-206ENST00000420121 KRTAP13-1Q8IUC0 172 aa6.55□□□□□ -1.36
SSBP3-206ENST00000420121 YPEL4Q96NS1 127 aa6.55□□□□□ -1.36
SSBP3-206ENST00000420121 A0A087X002 238 aa6.54□□□□□ -1.36
SSBP3-206ENST00000420121 C11orf86A6NJI1 115 aa6.54□□□□□ -1.36
SSBP3-206ENST00000420121 H3BRM9 83 aa6.54□□□□□ -1.36
SSBP3-206ENST00000420121 DDTP30046 118 aa6.54□□□□□ -1.36
SSBP3-206ENST00000420121 GAGE10A6NGK3 116 aa6.53□□□□□ -1.36
SSBP3-206ENST00000420121 TSTD3H0UI37 97 aa6.53□□□□□ -1.36
SSBP3-206ENST00000420121 APOC3P02656 99 aa6.53□□□□□ -1.36
SSBP3-206ENST00000420121 RPL13AP40429 203 aaKnown RBP6.53□□□□□ -1.36
SSBP3-206ENST00000420121 Q8NDZ9 215 aa6.53□□□□□ -1.36
SSBP3-206ENST00000420121 KRTAP9-9Q9BYP9 154 aa6.53□□□□□ -1.36
SSBP3-206ENST00000420121 KRTAP9-4Q9BYQ2 154 aa6.53□□□□□ -1.36
SSBP3-206ENST00000420121 ATP5LO75964 103 aa6.52□□□□□ -1.37
SSBP3-206ENST00000420121 VPREB1P12018 145 aa6.52□□□□□ -1.37
SSBP3-206ENST00000420121 PFN2P35080 140 aa6.52□□□□□ -1.37
SSBP3-206ENST00000420121 RPL28P46779 137 aaKnown RBP6.52□□□□□ -1.37
SSBP3-206ENST00000420121 NDUFA6P56556 154 aa6.52□□□□□ -1.37
SSBP3-206ENST00000420121 A0A1B0GV72 72 aa6.51□□□□□ -1.37
SSBP3-206ENST00000420121 SCGB1A1P11684 91 aa6.51□□□□□ -1.37
SSBP3-206ENST00000420121 BAGE3Q86Y29 109 aa6.51□□□□□ -1.37
SSBP3-206ENST00000420121 ZNF625Q96I27 306 aaPredicted RBP6.51□□□□□ -1.37
SSBP3-206ENST00000420121 SND1-IT1Q9HBX3 110 aa6.51□□□□□ -1.37
SSBP3-206ENST00000420121 ERG28Q9UKR5 140 aa6.51□□□□□ -1.37
SSBP3-206ENST00000420121 C5orf52A6NGY3 159 aa6.5□□□□□ -1.37
SSBP3-206ENST00000420121 SVBPQ8N300 66 aa6.5□□□□□ -1.37
SSBP3-206ENST00000420121 NKAPP1Q8N9T2 125 aa6.5□□□□□ -1.37
SSBP3-206ENST00000420121 IGKV2-28A0A075B6P5 120 aa6.49□□□□□ -1.37
SSBP3-206ENST00000420121 IGKV2D-28P01615 120 aa6.49□□□□□ -1.37
SSBP3-206ENST00000420121 KRTAP13-2Q52LG2 175 aa6.49□□□□□ -1.37
SSBP3-206ENST00000420121 ANAPC11Q9NYG5 84 aa6.49□□□□□ -1.37
SSBP3-206ENST00000420121 B5MCH6 92 aa6.48□□□□□ -1.37
SSBP3-206ENST00000420121 COX17Q14061 63 aa6.48□□□□□ -1.37
SSBP3-206ENST00000420121 TMEM170BQ5T4T1 132 aa6.48□□□□□ -1.37
SSBP3-206ENST00000420121 TRAV12-1A0A0B4J245 112 aa6.47□□□□□ -1.37
SSBP3-206ENST00000420121 TMEM223A0PJW6 202 aa6.47□□□□□ -1.37
SSBP3-206ENST00000420121 CHCHD1Q96BP2 118 aaKnown RBP6.47□□□□□ -1.37
SSBP3-206ENST00000420121 TMEM126AQ9H061 195 aa6.47□□□□□ -1.37
SSBP3-206ENST00000420121 M0R378 163 aa6.46□□□□□ -1.38
SSBP3-206ENST00000420121 CRYGAP11844 174 aa6.46□□□□□ -1.38
SSBP3-206ENST00000420121 UBE2AP49459 152 aa6.46□□□□□ -1.38
SSBP3-206ENST00000420121 PRLHP81277 87 aa6.46□□□□□ -1.38
SSBP3-206ENST00000420121 IFI27L1Q96BM0 104 aa6.46□□□□□ -1.38
SSBP3-206ENST00000420121 TSPAN13O95857 204 aa6.45□□□□□ -1.38
SSBP3-206ENST00000420121 PRR4Q16378 134 aa6.45□□□□□ -1.38
SSBP3-206ENST00000420121 SFTA2Q6UW10 78 aa6.45□□□□□ -1.38
SSBP3-206ENST00000420121 CBLN2Q8IUK8 224 aa6.45□□□□□ -1.38
SSBP3-206ENST00000420121 TYMSOSQ8TAI1 123 aa6.45□□□□□ -1.38
SSBP3-206ENST00000420121 LINC00310P59036 64 aa6.44□□□□□ -1.38
SSBP3-206ENST00000420121 RPL24P83731 157 aaKnown RBP6.44□□□□□ -1.38
SSBP3-206ENST00000420121 FAM229BQ4G0N7 80 aa6.44□□□□□ -1.38
SSBP3-206ENST00000420121 FAM19A2Q8N3H0 131 aa6.44□□□□□ -1.38
SSBP3-206ENST00000420121 FAM19A1Q7Z5A9 133 aa6.43□□□□□ -1.38
SSBP3-206ENST00000420121 VPS25Q9BRG1 176 aa6.43□□□□□ -1.38
SSBP3-206ENST00000420121 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
SSBP3-206ENST00000420121 A0A0U1RRA0 63 aa6.42□□□□□ -1.38
SSBP3-206ENST00000420121 M0R143 59 aa6.42□□□□□ -1.38
SSBP3-206ENST00000420121 LINC00158P58513 81 aa6.42□□□□□ -1.38
SSBP3-206ENST00000420121 SNRPEP62304 92 aaKnown RBP6.42□□□□□ -1.38
SSBP3-206ENST00000420121 PLEKHB2Q96CS7 222 aa6.42□□□□□ -1.38
SSBP3-206ENST00000420121 SMIM13P0DJ93 91 aa6.41□□□□□ -1.38
SSBP3-206ENST00000420121 MTURNQ8N3F0 131 aa6.41□□□□□ -1.38
SSBP3-206ENST00000420121 MUC2Q02817 5179 aa6.41□□□□□ -1.38
SSBP3-206ENST00000420121 C9orf118A6NHY6 69 aa6.4□□□□□ -1.38
SSBP3-206ENST00000420121 HSBP1O75506 76 aa6.4□□□□□ -1.38
SSBP3-206ENST00000420121 TRGC2P03986 189 aa6.4□□□□□ -1.38
SSBP3-206ENST00000420121 TSPEAR-AS2P59090 65 aa6.4□□□□□ -1.38
SSBP3-206ENST00000420121 HERV-K104P63124 156 aa6.4□□□□□ -1.38
SSBP3-206ENST00000420121 C5orf47Q569G3 176 aa6.4□□□□□ -1.38
SSBP3-206ENST00000420121 SERF1AO75920 110 aa6.39□□□□□ -1.39
SSBP3-206ENST00000420121 C3orf22Q8N5N4 141 aa6.39□□□□□ -1.39
SSBP3-206ENST00000420121 MIR7-3HGQ8N6C7 128 aa6.39□□□□□ -1.39
SSBP3-206ENST00000420121 LINC00304Q8N9R0 145 aa6.39□□□□□ -1.39
SSBP3-206ENST00000420121 KRTAP4-16G5E9R7 235 aaPredicted RBP6.38□□□□□ -1.39
SSBP3-206ENST00000420121 S100A2P29034 98 aa6.38□□□□□ -1.39
SSBP3-206ENST00000420121 SPRR1AP35321 89 aa6.38□□□□□ -1.39
SSBP3-206ENST00000420121 PYY3Q5JQD4 70 aa6.38□□□□□ -1.39
SSBP3-206ENST00000420121 BOD1L2Q8IYS8 172 aa6.38□□□□□ -1.39
SSBP3-206ENST00000420121 NDUFA12Q9UI09 145 aa6.38□□□□□ -1.39
SSBP3-206ENST00000420121 MEIG1Q5JSS6 88 aa6.37□□□□□ -1.39
SSBP3-206ENST00000420121 SPRR4Q96PI1 79 aa6.37□□□□□ -1.39
SSBP3-206ENST00000420121 RETNLBQ9BQ08 111 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms