RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 A0A087WTM6 91 aa11.55□□□□□ -0.56
SYNGAP1-202ENST00000418600 H0Y9P7 68 aa11.55□□□□□ -0.56
SYNGAP1-202ENST00000418600 LINC00575Q6W349 94 aa11.54□□□□□ -0.56
SYNGAP1-202ENST00000418600 C2CD3Q4AC94 2353 aa11.53□□□□□ -0.56
SYNGAP1-202ENST00000418600 TRBV7-7A0A0K0K1E9 115 aa11.53□□□□□ -0.56
SYNGAP1-202ENST00000418600 Q8N3U1 123 aa11.53□□□□□ -0.56
SYNGAP1-202ENST00000418600 COX6B2Q6YFQ2 88 aa11.53□□□□□ -0.56
SYNGAP1-202ENST00000418600 F8P00451 2351 aa11.53□□□□□ -0.56
SYNGAP1-202ENST00000418600 A0A087WYN8 130 aa11.52□□□□□ -0.56
SYNGAP1-202ENST00000418600 hDV103S1A0JD37 113 aa11.52□□□□□ -0.57
SYNGAP1-202ENST00000418600 SPINK1P00995 79 aa11.52□□□□□ -0.57
SYNGAP1-202ENST00000418600 HCG22E2RYF7 251 aa11.52□□□□□ -0.57
SYNGAP1-202ENST00000418600 DSCAML1Q8TD84 2053 aa11.52□□□□□ -0.57
SYNGAP1-202ENST00000418600 C6orf48Q9UBA6 75 aa11.51□□□□□ -0.57
SYNGAP1-202ENST00000418600 DOPEY1Q5JWR5 2465 aa11.5□□□□□ -0.57
SYNGAP1-202ENST00000418600 GVQW2A0A096LPI5 108 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-202ENST00000418600 CSNK1G2-AS1Q8NCQ2 148 aa11.5□□□□□ -0.57
SYNGAP1-202ENST00000418600 PCOTHQ58A44 107 aa11.5□□□□□ -0.57
SYNGAP1-202ENST00000418600 C1orf195Q5TG92 126 aa11.49□□□□□ -0.57
SYNGAP1-202ENST00000418600 KLK9Q2XQG4 91 aa11.47□□□□□ -0.57
SYNGAP1-202ENST00000418600 Q8NBF4 154 aa11.47□□□□□ -0.57
SYNGAP1-202ENST00000418600 BCE1O60756 84 aa11.47□□□□□ -0.57
SYNGAP1-202ENST00000418600 LINC00528Q8N1L1 170 aa11.47□□□□□ -0.57
SYNGAP1-202ENST00000418600 AGRNO00468 2067 aa11.46□□□□□ -0.58
SYNGAP1-202ENST00000418600 CCDC179H3BU77 68 aa11.45□□□□□ -0.58
SYNGAP1-202ENST00000418600 CDIP1Q9H305 208 aa11.45□□□□□ -0.58
SYNGAP1-202ENST00000418600 TP53AIP1Q9HCN2 124 aa11.45□□□□□ -0.58
SYNGAP1-202ENST00000418600 ATP11AUNQ6ZP68 121 aa11.43□□□□□ -0.58
SYNGAP1-202ENST00000418600 EPG5Q9HCE0 2579 aa11.43□□□□□ -0.58
SYNGAP1-202ENST00000418600 PMAIP1Q13794 54 aa11.43□□□□□ -0.58
SYNGAP1-202ENST00000418600 ADAMTSL4-AS1Q5T5F5 129 aa11.42□□□□□ -0.58
SYNGAP1-202ENST00000418600 A0A1B0GW54 56 aa11.41□□□□□ -0.58
SYNGAP1-202ENST00000418600 CXCL6P80162 114 aa11.41□□□□□ -0.58
SYNGAP1-202ENST00000418600 C7orf65Q6ZTY9 151 aa11.41□□□□□ -0.58
SYNGAP1-202ENST00000418600 TSPEAR-AS2P59090 65 aa11.41□□□□□ -0.58
SYNGAP1-202ENST00000418600 IGKV2D-30A0A075B6S6 120 aa11.41□□□□□ -0.58
SYNGAP1-202ENST00000418600 IGKV2-30P06310 120 aa11.41□□□□□ -0.58
SYNGAP1-202ENST00000418600 C1orf64Q8NEQ6 169 aa11.39□□□□□ -0.59
SYNGAP1-202ENST00000418600 LINC00304Q8N9R0 145 aa11.38□□□□□ -0.59
SYNGAP1-202ENST00000418600 IGHV3OR16-9A0A0B4J2B5 98 aa11.38□□□□□ -0.59
SYNGAP1-202ENST00000418600 A0A087WVE0 104 aa11.38□□□□□ -0.59
SYNGAP1-202ENST00000418600 TMEM254Q8TBM7 123 aa11.38□□□□□ -0.59
SYNGAP1-202ENST00000418600 SOSTDC1Q6X4U4 206 aa11.36□□□□□ -0.59
SYNGAP1-202ENST00000418600 DEFB116Q30KQ4 102 aa11.36□□□□□ -0.59
SYNGAP1-202ENST00000418600 SRCAPQ6ZRS2 3230 aa11.35□□□□□ -0.59
SYNGAP1-202ENST00000418600 GOLGB1Q14789 3259 aaKnown RBP11.35□□□□□ -0.59
SYNGAP1-202ENST00000418600 A8MTW9 85 aa11.35□□□□□ -0.59
SYNGAP1-202ENST00000418600 ACYP2P14621 99 aa11.35□□□□□ -0.59
SYNGAP1-202ENST00000418600 FN1P02751 2386 aaKnown RBP11.35□□□□□ -0.59
SYNGAP1-202ENST00000418600 URB1-AS1Q96HZ7 61 aa11.34□□□□□ -0.59
SYNGAP1-202ENST00000418600 ZNF575Q86XF7 245 aa11.33□□□□□ -0.6
SYNGAP1-202ENST00000418600 SPAG11AQ6PDA7 123 aa11.33□□□□□ -0.6
SYNGAP1-202ENST00000418600 KIAA0087Q14695 138 aa11.32□□□□□ -0.6
SYNGAP1-202ENST00000418600 A0A1B0GU69 56 aa11.31□□□□□ -0.6
SYNGAP1-202ENST00000418600 IGLV5-39A0A0G2JS06 123 aa11.3□□□□□ -0.6
SYNGAP1-202ENST00000418600 TNP2Q05952 138 aa11.3□□□□□ -0.6
SYNGAP1-202ENST00000418600 HECTD1Q9ULT8 2610 aa11.3□□□□□ -0.6
SYNGAP1-202ENST00000418600 H3BPC8 53 aa11.29□□□□□ -0.6
SYNGAP1-202ENST00000418600 FAM168BA1KXE4 195 aa11.29□□□□□ -0.6
SYNGAP1-202ENST00000418600 Q9UF83 564 aa11.29□□□□□ -0.6
SYNGAP1-202ENST00000418600 LCE6AA0A183 80 aa11.28□□□□□ -0.6
SYNGAP1-202ENST00000418600 Q96NJ1 140 aa11.28□□□□□ -0.6
SYNGAP1-202ENST00000418600 WDR87Q6ZQQ6 2873 aa11.28□□□□□ -0.6
SYNGAP1-202ENST00000418600 PSPHP1O15172 72 aa11.28□□□□□ -0.6
SYNGAP1-202ENST00000418600 USP9XQ93008 2570 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-202ENST00000418600 GIG44P09565 113 aaPredicted RBP11.27□□□□□ -0.6
SYNGAP1-202ENST00000418600 Q6ZRX8 168 aa11.26□□□□□ -0.61
SYNGAP1-202ENST00000418600 TLN2Q9Y4G6 2542 aa11.26□□□□□ -0.61
SYNGAP1-202ENST00000418600 LINC00846Q9NV44 126 aa11.26□□□□□ -0.61
SYNGAP1-202ENST00000418600 LINC00313P59037 77 aa11.26□□□□□ -0.61
SYNGAP1-202ENST00000418600 MYO9AB2RTY4 2548 aa11.25□□□□□ -0.61
SYNGAP1-202ENST00000418600 LINC00310P59036 64 aa11.24□□□□□ -0.61
SYNGAP1-202ENST00000418600 SMIM29Q86T20 159 aa11.23□□□□□ -0.61
SYNGAP1-202ENST00000418600 C9orf163Q8N9P6 203 aa11.23□□□□□ -0.61
SYNGAP1-202ENST00000418600 POLQO75417 2590 aa11.23□□□□□ -0.61
SYNGAP1-202ENST00000418600 ZNF861PO60384 105 aa11.22□□□□□ -0.61
SYNGAP1-202ENST00000418600 ELOF1P60002 83 aaKnown RBP11.22□□□□□ -0.61
SYNGAP1-202ENST00000418600 LINC00612Q8N6U2 182 aa11.22□□□□□ -0.61
SYNGAP1-202ENST00000418600 A0A096LNJ9 63 aa11.21□□□□□ -0.61
SYNGAP1-202ENST00000418600 LINC01546A6NGU7 62 aa11.2□□□□□ -0.62
SYNGAP1-202ENST00000418600 IGLV7-43P04211 117 aa11.2□□□□□ -0.62
SYNGAP1-202ENST00000418600 C8orf87E5RJ46 101 aa11.19□□□□□ -0.62
SYNGAP1-202ENST00000418600 ACANP16112 2415 aa11.19□□□□□ -0.62
SYNGAP1-202ENST00000418600 WIPF1O43516 503 aa11.18□□□□□ -0.62
SYNGAP1-202ENST00000418600 KRTAP21-3Q3LHN1 58 aa11.17□□□□□ -0.62
SYNGAP1-202ENST00000418600 C15orf56Q8N910 161 aa11.17□□□□□ -0.62
SYNGAP1-202ENST00000418600 IGLV5-45A0A087WSX0 123 aa11.16□□□□□ -0.62
SYNGAP1-202ENST00000418600 C9orf92A6NGG3 77 aa11.16□□□□□ -0.62
SYNGAP1-202ENST00000418600 SERTAD4-AS1Q5TG53 156 aa11.16□□□□□ -0.62
SYNGAP1-202ENST00000418600 ST20-AS1Q8NBB2 130 aa11.15□□□□□ -0.62
SYNGAP1-202ENST00000418600 MTORP42345 2549 aa11.15□□□□□ -0.62
SYNGAP1-202ENST00000418600 TRAV22A0A0B4J277 110 aa11.14□□□□□ -0.63
SYNGAP1-202ENST00000418600 FLNBO75369 2602 aaKnown RBP11.14□□□□□ -0.63
SYNGAP1-202ENST00000418600 PRR34Q9NV39 138 aa11.13□□□□□ -0.63
SYNGAP1-202ENST00000418600 CENPFP49454 3210 aa11.13□□□□□ -0.63
SYNGAP1-202ENST00000418600 IGLV1-50A0A075B6I6 118 aa11.13□□□□□ -0.63
SYNGAP1-202ENST00000418600 LOC110117498A0A087WWA1 95 aa11.12□□□□□ -0.63
SYNGAP1-202ENST00000418600 CNBPP62633 177 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-202ENST00000418600 LOC101927531A0A1B0GV80 90 aa11.11□□□□□ -0.63
SYNGAP1-202ENST00000418600 USP9YO00507 2555 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms