RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 FAM30AQ9NZY2 134 aa11.85□□□□□ -0.51
SEMA3B-202ENST00000418576 TLX1NBP0CAT3 122 aa11.84□□□□□ -0.51
SEMA3B-202ENST00000418576 LGALS3P17931 250 aaKnown RBP11.84□□□□□ -0.51
SEMA3B-202ENST00000418576 DPH3Q96FX2 82 aa11.84□□□□□ -0.51
SEMA3B-202ENST00000418576 IGKV2-24A0A0C4DH68 120 aa11.84□□□□□ -0.51
SEMA3B-202ENST00000418576 CDK2AP2O75956 126 aa11.84□□□□□ -0.51
SEMA3B-202ENST00000418576 C9orf116Q5BN46 136 aaPredicted RBP11.84□□□□□ -0.51
SEMA3B-202ENST00000418576 A0A096LNI7 61 aa11.83□□□□□ -0.52
SEMA3B-202ENST00000418576 NDUFC2-KCTD14E9PQ53 114 aa11.83□□□□□ -0.52
SEMA3B-202ENST00000418576 GAGE2BQ13066 116 aa11.83□□□□□ -0.52
SEMA3B-202ENST00000418576 SPANXB1Q9NS25 103 aaPredicted RBP11.83□□□□□ -0.52
SEMA3B-202ENST00000418576 NHP2Q9NX24 153 aaKnown RBP11.83□□□□□ -0.52
SEMA3B-202ENST00000418576 J3QR89 54 aa11.82□□□□□ -0.52
SEMA3B-202ENST00000418576 K7ERJ3 54 aa11.82□□□□□ -0.52
SEMA3B-202ENST00000418576 ZNF625Q96I27 306 aaPredicted RBP11.82□□□□□ -0.52
SEMA3B-202ENST00000418576 CHTF8P0CG12 524 aa11.82□□□□□ -0.52
SEMA3B-202ENST00000418576 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.82□□□□□ -0.52
SEMA3B-202ENST00000418576 TMEM238LA0A1B0GVL6 79 aa11.81□□□□□ -0.52
SEMA3B-202ENST00000418576 A6NJY4 79 aa11.81□□□□□ -0.52
SEMA3B-202ENST00000418576 Q6ZRP5 223 aa11.81□□□□□ -0.52
SEMA3B-202ENST00000418576 NDUFA12Q9UI09 145 aa11.81□□□□□ -0.52
SEMA3B-202ENST00000418576 LRP1BQ9NZR2 4599 aa11.81□□□□□ -0.52
SEMA3B-202ENST00000418576 HERV-K104P63124 156 aa11.8□□□□□ -0.52
SEMA3B-202ENST00000418576 CIRBPQ14011 172 aaKnown RBP11.8□□□□□ -0.52
SEMA3B-202ENST00000418576 SPACA4Q8TDM5 124 aa11.8□□□□□ -0.52
SEMA3B-202ENST00000418576 DYNC1H1Q14204 4646 aaKnown RBP11.8□□□□□ -0.52
SEMA3B-202ENST00000418576 GAGE2EQ4V326 116 aa11.79□□□□□ -0.52
SEMA3B-202ENST00000418576 GAGE2DQ9UEU5 116 aa11.79□□□□□ -0.52
SEMA3B-202ENST00000418576 PANO1I0J062 215 aa11.79□□□□□ -0.52
SEMA3B-202ENST00000418576 COX17Q14061 63 aa11.79□□□□□ -0.52
SEMA3B-202ENST00000418576 NAA38Q9BRA0 125 aaKnown RBP11.79□□□□□ -0.52
SEMA3B-202ENST00000418576 ERG28Q9UKR5 140 aa11.79□□□□□ -0.52
SEMA3B-202ENST00000418576 XGP55808 180 aa11.78□□□□□ -0.52
SEMA3B-202ENST00000418576 SCGB1A1P11684 91 aa11.77□□□□□ -0.52
SEMA3B-202ENST00000418576 PFN2P35080 140 aa11.77□□□□□ -0.52
SEMA3B-202ENST00000418576 SRSF9Q13242 221 aaKnown RBP eCLIP11.77□□□□□ -0.52
SEMA3B-202ENST00000418576 SCXQ7RTU7 201 aa11.77□□□□□ -0.52
SEMA3B-202ENST00000418576 CIRBP-AS1Q8TBR5 109 aa11.77□□□□□ -0.53
SEMA3B-202ENST00000418576 HAMPP81172 84 aa11.76□□□□□ -0.53
SEMA3B-202ENST00000418576 BIRC6Q9NR09 4857 aa11.75□□□□□ -0.53
SEMA3B-202ENST00000418576 A0A087WYN8 130 aa11.75□□□□□ -0.53
SEMA3B-202ENST00000418576 MEIG1Q5JSS6 88 aa11.75□□□□□ -0.53
SEMA3B-202ENST00000418576 A0A0J9YXY3 114 aa11.74□□□□□ -0.53
SEMA3B-202ENST00000418576 LYRM7Q5U5X0 104 aa11.74□□□□□ -0.53
SEMA3B-202ENST00000418576 LINC00158P58513 81 aa11.74□□□□□ -0.53
SEMA3B-202ENST00000418576 LITAFQ99732 161 aa11.73□□□□□ -0.53
SEMA3B-202ENST00000418576 RPL24P83731 157 aaKnown RBP11.72□□□□□ -0.53
SEMA3B-202ENST00000418576 PLAC8Q9NZF1 115 aa11.72□□□□□ -0.53
SEMA3B-202ENST00000418576 TMEM238C9JI98 176 aa11.72□□□□□ -0.53
SEMA3B-202ENST00000418576 XAGE1AQ9HD64 81 aa11.72□□□□□ -0.53
SEMA3B-202ENST00000418576 A0A0U1RRA0 63 aa11.7□□□□□ -0.54
SEMA3B-202ENST00000418576 C9orf129Q5T035 196 aaKnown RBP11.7□□□□□ -0.54
SEMA3B-202ENST00000418576 SIGMAR1Q99720 223 aa11.69□□□□□ -0.54
SEMA3B-202ENST00000418576 PRO0461Q9UI25 63 aa11.69□□□□□ -0.54
SEMA3B-202ENST00000418576 A0A1W2PNN7 141 aa11.68□□□□□ -0.54
SEMA3B-202ENST00000418576 H3BMG7 143 aa11.68□□□□□ -0.54
SEMA3B-202ENST00000418576 SPANXDQ9BXN6 97 aa11.67□□□□□ -0.54
SEMA3B-202ENST00000418576 SND1-IT1Q9HBX3 110 aa11.67□□□□□ -0.54
SEMA3B-202ENST00000418576 SPANXCQ9NY87 97 aa11.67□□□□□ -0.54
SEMA3B-202ENST00000418576 DNAH8Q96JB1 4490 aa11.67□□□□□ -0.54
SEMA3B-202ENST00000418576 TRBV20-1A0A075B6N2 111 aa11.67□□□□□ -0.54
SEMA3B-202ENST00000418576 TIMM17BO60830 172 aa11.67□□□□□ -0.54
SEMA3B-202ENST00000418576 CFC1BP0CG36 223 aa11.67□□□□□ -0.54
SEMA3B-202ENST00000418576 CFC1P0CG37 223 aa11.67□□□□□ -0.54
SEMA3B-202ENST00000418576 FAM168BA1KXE4 195 aa11.66□□□□□ -0.54
SEMA3B-202ENST00000418576 SMR3BP02814 79 aaPredicted RBP11.66□□□□□ -0.54
SEMA3B-202ENST00000418576 FAM19A5Q7Z5A7 132 aaPredicted RBP11.66□□□□□ -0.54
SEMA3B-202ENST00000418576 MIR7-3HGQ8N6C7 128 aa11.66□□□□□ -0.54
SEMA3B-202ENST00000418576 KIAA1109Q2LD37 5005 aa11.66□□□□□ -0.54
SEMA3B-202ENST00000418576 APOBP04114 4563 aaKnown RBP11.65□□□□□ -0.54
SEMA3B-202ENST00000418576 A4D1N5 150 aa11.65□□□□□ -0.54
SEMA3B-202ENST00000418576 EPM2AB3EWF7 344 aa11.65□□□□□ -0.54
SEMA3B-202ENST00000418576 ADAMTSL4-AS1Q5T5F5 129 aa11.65□□□□□ -0.54
SEMA3B-202ENST00000418576 MUSTN1Q8IVN3 82 aa11.65□□□□□ -0.54
SEMA3B-202ENST00000418576 EIF4EBP3O60516 100 aaPredicted RBP11.64□□□□□ -0.55
SEMA3B-202ENST00000418576 TSPAN13O95857 204 aa11.64□□□□□ -0.55
SEMA3B-202ENST00000418576 C7orf33Q8WU49 177 aa11.63□□□□□ -0.55
SEMA3B-202ENST00000418576 PLA2G2DQ9UNK4 145 aa11.63□□□□□ -0.55
SEMA3B-202ENST00000418576 A0A0B4J2C4 111 aa11.62□□□□□ -0.55
SEMA3B-202ENST00000418576 ETDBQ3ZM63 59 aa11.62□□□□□ -0.55
SEMA3B-202ENST00000418576 LINC00528Q8N1L1 170 aa11.62□□□□□ -0.55
SEMA3B-202ENST00000418576 RYR1P21817 5038 aa11.61□□□□□ -0.55
SEMA3B-202ENST00000418576 FAM229AH3BQW9 127 aa11.61□□□□□ -0.55
SEMA3B-202ENST00000418576 M0QXV9 152 aa11.61□□□□□ -0.55
SEMA3B-202ENST00000418576 SERTAD4-AS1Q5TG53 156 aa11.61□□□□□ -0.55
SEMA3B-202ENST00000418576 Q8N1X5 172 aa11.61□□□□□ -0.55
SEMA3B-202ENST00000418576 DAND5Q8N907 189 aa11.61□□□□□ -0.55
SEMA3B-202ENST00000418576 PRO1854Q9UHT4 67 aa11.61□□□□□ -0.55
SEMA3B-202ENST00000418576 KRTAP7-1Q8IUC3 87 aa11.59□□□□□ -0.55
SEMA3B-202ENST00000418576 C22orf24Q9Y442 160 aa11.59□□□□□ -0.55
SEMA3B-202ENST00000418576 IFITM1P13164 125 aa11.59□□□□□ -0.55
SEMA3B-202ENST00000418576 PHF5AQ7RTV0 110 aaKnown RBP11.59□□□□□ -0.55
SEMA3B-202ENST00000418576 NKAPP1Q8N9T2 125 aa11.59□□□□□ -0.55
SEMA3B-202ENST00000418576 HSPG2P98160 4391 aa11.58□□□□□ -0.56
SEMA3B-202ENST00000418576 IGLV5-37A0A075B6J1 123 aa11.56□□□□□ -0.56
SEMA3B-202ENST00000418576 LOC107984156A0A0G2JMH3 177 aa11.56□□□□□ -0.56
SEMA3B-202ENST00000418576 MRPL55Q7Z7F7 128 aaKnown RBP11.56□□□□□ -0.56
SEMA3B-202ENST00000418576 ARL17AQ8IVW1 177 aa11.56□□□□□ -0.56
SEMA3B-202ENST00000418576 PLA2G1BP04054 148 aaKnown RBP11.55□□□□□ -0.56
SEMA3B-202ENST00000418576 VPREB1P12018 145 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms