RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ERG28Q9UKR5 140 aa11.02□□□□□ -0.65
VCP-202ENST00000417448 LEPROTO15243 131 aa11□□□□□ -0.65
VCP-202ENST00000417448 LINC01545Q5VT33 79 aa11□□□□□ -0.65
VCP-202ENST00000417448 PET117Q6UWS5 81 aa11□□□□□ -0.65
VCP-202ENST00000417448 HIST3H2BBQ8N257 126 aa11□□□□□ -0.65
VCP-202ENST00000417448 M0QXV9 152 aa10.99□□□□□ -0.65
VCP-202ENST00000417448 SRSF9Q13242 221 aaKnown RBP eCLIP10.99□□□□□ -0.65
VCP-202ENST00000417448 LCE2AQ5TA79 106 aaPredicted RBP10.99□□□□□ -0.65
VCP-202ENST00000417448 NDUFA12Q9UI09 145 aa10.99□□□□□ -0.65
VCP-202ENST00000417448 SMIM13P0DJ93 91 aa10.98□□□□□ -0.65
VCP-202ENST00000417448 LINC00158P58513 81 aa10.98□□□□□ -0.65
VCP-202ENST00000417448 SND1-IT1Q9HBX3 110 aa10.97□□□□□ -0.65
VCP-202ENST00000417448 PSORS1C2Q9UIG4 136 aa10.97□□□□□ -0.65
VCP-202ENST00000417448 C22orf24Q9Y442 160 aa10.97□□□□□ -0.65
VCP-202ENST00000417448 J3QQQ9 107 aa10.96□□□□□ -0.65
VCP-202ENST00000417448 S100A6P06703 90 aa10.96□□□□□ -0.65
VCP-202ENST00000417448 HERVK_113P61574 105 aa10.96□□□□□ -0.65
VCP-202ENST00000417448 SNRPEP62304 92 aaKnown RBP10.96□□□□□ -0.65
VCP-202ENST00000417448 ATOH7Q8N100 152 aa10.96□□□□□ -0.65
VCP-202ENST00000417448 PLEKHB2Q96CS7 222 aa10.96□□□□□ -0.65
VCP-202ENST00000417448 HIST1H2BLQ99880 126 aa10.96□□□□□ -0.65
VCP-202ENST00000417448 MEIG1Q5JSS6 88 aa10.95□□□□□ -0.66
VCP-202ENST00000417448 GAGE10A6NGK3 116 aa10.94□□□□□ -0.66
VCP-202ENST00000417448 S100A2P29034 98 aa10.94□□□□□ -0.66
VCP-202ENST00000417448 UBE2BP63146 152 aa10.94□□□□□ -0.66
VCP-202ENST00000417448 Q8NDZ9 215 aa10.94□□□□□ -0.66
VCP-202ENST00000417448 MYMXA0A1B0GTQ4 84 aa10.93□□□□□ -0.66
VCP-202ENST00000417448 LGALS3P17931 250 aaKnown RBP10.93□□□□□ -0.66
VCP-202ENST00000417448 IGKV2D-26A0A0A0MRZ7 120 aa10.92□□□□□ -0.66
VCP-202ENST00000417448 E9PLD3 99 aa10.92□□□□□ -0.66
VCP-202ENST00000417448 COX17Q14061 63 aa10.92□□□□□ -0.66
VCP-202ENST00000417448 C1orf137Q5JT78 98 aa10.92□□□□□ -0.66
VCP-202ENST00000417448 DAND5Q8N907 189 aa10.92□□□□□ -0.66
VCP-202ENST00000417448 A0A0U1RQV1 116 aa10.91□□□□□ -0.66
VCP-202ENST00000417448 RPL37AP8A6NKH3 93 aa10.91□□□□□ -0.66
VCP-202ENST00000417448 SFTA2Q6UW10 78 aa10.91□□□□□ -0.66
VCP-202ENST00000417448 TTTY13Q9BZ97 58 aa10.91□□□□□ -0.66
VCP-202ENST00000417448 HERV-K104P63124 156 aa10.9□□□□□ -0.66
VCP-202ENST00000417448 MIR7-3HGQ8N6C7 128 aa10.9□□□□□ -0.66
VCP-202ENST00000417448 LINC00167Q96N53 147 aa10.9□□□□□ -0.66
VCP-202ENST00000417448 MRPL55Q7Z7F7 128 aaKnown RBP10.89□□□□□ -0.67
VCP-202ENST00000417448 C20orf202A1L168 122 aa10.88□□□□□ -0.67
VCP-202ENST00000417448 C5orf52A6NGY3 159 aa10.88□□□□□ -0.67
VCP-202ENST00000417448 VPREB1P12018 145 aa10.88□□□□□ -0.67
VCP-202ENST00000417448 ANKRD39Q53RE8 183 aa10.88□□□□□ -0.67
VCP-202ENST00000417448 NKAPP1Q8N9T2 125 aa10.88□□□□□ -0.67
VCP-202ENST00000417448 IGLV5-37A0A075B6J1 123 aa10.86□□□□□ -0.67
VCP-202ENST00000417448 A0A0J9YXY3 114 aa10.86□□□□□ -0.67
VCP-202ENST00000417448 LBHQ53QV2 105 aaPredicted RBP10.86□□□□□ -0.67
VCP-202ENST00000417448 NMUP48645 174 aa10.85□□□□□ -0.67
VCP-202ENST00000417448 NPC2P61916 151 aa10.85□□□□□ -0.67
VCP-202ENST00000417448 TP73-AS1Q9UF72 201 aa10.85□□□□□ -0.67
VCP-202ENST00000417448 IGKV2-28A0A075B6P5 120 aa10.84□□□□□ -0.67
VCP-202ENST00000417448 IGKV2D-28P01615 120 aa10.84□□□□□ -0.67
VCP-202ENST00000417448 ADAMTSL4-AS1Q5T5F5 129 aa10.84□□□□□ -0.67
VCP-202ENST00000417448 BOD1L2Q8IYS8 172 aa10.84□□□□□ -0.67
VCP-202ENST00000417448 IGLV7-43P04211 117 aa10.83□□□□□ -0.68
VCP-202ENST00000417448 ZNF815PA8K554 130 aa10.82□□□□□ -0.68
VCP-202ENST00000417448 EIF4EBP3O60516 100 aaPredicted RBP10.82□□□□□ -0.68
VCP-202ENST00000417448 NCR3O14931 201 aa10.81□□□□□ -0.68
VCP-202ENST00000417448 RPL24P83731 157 aaKnown RBP10.81□□□□□ -0.68
VCP-202ENST00000417448 PRR26Q8N8Z3 221 aa10.81□□□□□ -0.68
VCP-202ENST00000417448 TMA7Q9Y2S6 64 aaKnown RBP10.81□□□□□ -0.68
VCP-202ENST00000417448 LINC00587B1AMM8 73 aa10.8□□□□□ -0.68
VCP-202ENST00000417448 PCP2Q8IVA1 136 aa10.8□□□□□ -0.68
VCP-202ENST00000417448 TMEM238C9JI98 176 aa10.79□□□□□ -0.68
VCP-202ENST00000417448 SCGB1D1O95968 90 aa10.79□□□□□ -0.68
VCP-202ENST00000417448 SOSTDC1Q6X4U4 206 aa10.79□□□□□ -0.68
VCP-202ENST00000417448 IGLV1-50A0A075B6I6 118 aa10.77□□□□□ -0.69
VCP-202ENST00000417448 LITAFQ99732 161 aa10.77□□□□□ -0.69
VCP-202ENST00000417448 PRR4Q16378 134 aa10.76□□□□□ -0.69
VCP-202ENST00000417448 M0R378 163 aa10.75□□□□□ -0.69
VCP-202ENST00000417448 BCE1O60756 84 aa10.74□□□□□ -0.69
VCP-202ENST00000417448 LOC107984156A0A0G2JMH3 177 aa10.72□□□□□ -0.69
VCP-202ENST00000417448 SCGB1D4Q6XE38 83 aa10.72□□□□□ -0.69
VCP-202ENST00000417448 ARL17AQ8IVW1 177 aa10.72□□□□□ -0.69
VCP-202ENST00000417448 LINC00308Q8TCZ7 52 aa10.72□□□□□ -0.69
VCP-202ENST00000417448 MIEN1Q9BRT3 115 aa10.72□□□□□ -0.69
VCP-202ENST00000417448 TMEM126AQ9H061 195 aa10.72□□□□□ -0.69
VCP-202ENST00000417448 TRBV10-3A0A0K0K1G6 114 aa10.71□□□□□ -0.69
VCP-202ENST00000417448 ZNF861PO60384 105 aa10.71□□□□□ -0.69
VCP-202ENST00000417448 AKR1D1P51857 326 aa10.71□□□□□ -0.69
VCP-202ENST00000417448 DIRC1Q969H9 104 aa10.71□□□□□ -0.69
VCP-202ENST00000417448 H0Y9J4 135 aa10.7□□□□□ -0.7
VCP-202ENST00000417448 TIMM17BO60830 172 aa10.7□□□□□ -0.7
VCP-202ENST00000417448 PRLHP81277 87 aa10.7□□□□□ -0.7
VCP-202ENST00000417448 HSBP1L1C9JCN9 74 aa10.69□□□□□ -0.7
VCP-202ENST00000417448 UBE2AP49459 152 aa10.69□□□□□ -0.7
VCP-202ENST00000417448 FAM19A1Q7Z5A9 133 aa10.69□□□□□ -0.7
VCP-202ENST00000417448 RPL28P46779 137 aaKnown RBP10.66□□□□□ -0.7
VCP-202ENST00000417448 KRTAP13-1Q8IUC0 172 aa10.66□□□□□ -0.7
VCP-202ENST00000417448 DDTP30046 118 aa10.65□□□□□ -0.7
VCP-202ENST00000417448 SPANXB1Q9NS25 103 aaPredicted RBP10.65□□□□□ -0.7
VCP-202ENST00000417448 NDUFC2O95298 119 aa10.64□□□□□ -0.71
VCP-202ENST00000417448 KRTAP1-4P0C5Y4 121 aa10.64□□□□□ -0.71
VCP-202ENST00000417448 SPANXDQ9BXN6 97 aa10.64□□□□□ -0.71
VCP-202ENST00000417448 SPANXCQ9NY87 97 aa10.64□□□□□ -0.71
VCP-202ENST00000417448 ANAPC11Q9NYG5 84 aa10.64□□□□□ -0.71
VCP-202ENST00000417448 FSIP2Q5CZC0 6907 aa10.63□□□□□ -0.71
VCP-202ENST00000417448 TRBV10-2A0A0K0K1G8 114 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms