RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 PCP2Q8IVA1 136 aa7.98□□□□□ -1.13
YIPF3-203ENST00000416380 LGALS3P17931 250 aaKnown RBP7.97□□□□□ -1.13
YIPF3-203ENST00000416380 SMCPP49901 116 aaPredicted RBP7.97□□□□□ -1.13
YIPF3-203ENST00000416380 TSPEAR-AS2P59090 65 aa7.97□□□□□ -1.13
YIPF3-203ENST00000416380 C9orf129Q5T035 196 aaKnown RBP7.97□□□□□ -1.13
YIPF3-203ENST00000416380 PLEKHB2Q96CS7 222 aa7.97□□□□□ -1.13
YIPF3-203ENST00000416380 NDUFC2-KCTD14E9PQ53 114 aa7.96□□□□□ -1.14
YIPF3-203ENST00000416380 LEPROTO15243 131 aa7.96□□□□□ -1.14
YIPF3-203ENST00000416380 CXCL5P42830 114 aa7.96□□□□□ -1.14
YIPF3-203ENST00000416380 HIGD1BQ9P298 99 aa7.96□□□□□ -1.14
YIPF3-203ENST00000416380 MYMXA0A1B0GTQ4 84 aa7.95□□□□□ -1.14
YIPF3-203ENST00000416380 FAM168BA1KXE4 195 aa7.95□□□□□ -1.14
YIPF3-203ENST00000416380 ZNF815PA8K554 130 aa7.95□□□□□ -1.14
YIPF3-203ENST00000416380 PRSS2P07478 247 aa7.95□□□□□ -1.14
YIPF3-203ENST00000416380 GAGE2BQ13066 116 aa7.95□□□□□ -1.14
YIPF3-203ENST00000416380 Q5VSD8 79 aa7.95□□□□□ -1.14
YIPF3-203ENST00000416380 TP73-AS1Q9UF72 201 aa7.95□□□□□ -1.14
YIPF3-203ENST00000416380 J3QQQ9 107 aa7.94□□□□□ -1.14
YIPF3-203ENST00000416380 CKS1BP61024 79 aa7.94□□□□□ -1.14
YIPF3-203ENST00000416380 BATFQ16520 125 aa7.94□□□□□ -1.14
YIPF3-203ENST00000416380 SNHG12Q9BXW3 62 aa7.94□□□□□ -1.14
YIPF3-203ENST00000416380 TTTY13Q9BZ97 58 aa7.94□□□□□ -1.14
YIPF3-203ENST00000416380 LINC00474Q9P2X8 69 aa7.94□□□□□ -1.14
YIPF3-203ENST00000416380 RPL18AQ02543 176 aaKnown RBP7.93□□□□□ -1.14
YIPF3-203ENST00000416380 HSD52Q0P140 79 aa7.93□□□□□ -1.14
YIPF3-203ENST00000416380 SCGB1D4Q6XE38 83 aa7.93□□□□□ -1.14
YIPF3-203ENST00000416380 C2orf91Q6ZV80 131 aa7.93□□□□□ -1.14
YIPF3-203ENST00000416380 KRTAP11-1Q8IUC1 163 aa7.93□□□□□ -1.14
YIPF3-203ENST00000416380 TNXBP22105 4242 aa7.92□□□□□ -1.14
YIPF3-203ENST00000416380 HERC1Q15751 4861 aa7.92□□□□□ -1.14
YIPF3-203ENST00000416380 HINT1P49773 126 aaPredicted RBP7.92□□□□□ -1.14
YIPF3-203ENST00000416380 COL5A1-AS1Q5SY13 56 aa7.92□□□□□ -1.14
YIPF3-203ENST00000416380 PKIGQ9Y2B9 76 aa7.92□□□□□ -1.14
YIPF3-203ENST00000416380 TAL2Q16559 108 aa7.91□□□□□ -1.14
YIPF3-203ENST00000416380 SERTAD4-AS1Q5TG53 156 aa7.91□□□□□ -1.14
YIPF3-203ENST00000416380 Q8NDZ9 215 aa7.91□□□□□ -1.14
YIPF3-203ENST00000416380 GAGE2EQ4V326 116 aa7.9□□□□□ -1.14
YIPF3-203ENST00000416380 GAGE2DQ9UEU5 116 aa7.9□□□□□ -1.14
YIPF3-203ENST00000416380 BVES-AS1Q5T3Y7 98 aa7.89□□□□□ -1.15
YIPF3-203ENST00000416380 XAGE1AQ9HD64 81 aa7.89□□□□□ -1.15
YIPF3-203ENST00000416380 ERG28Q9UKR5 140 aa7.89□□□□□ -1.15
YIPF3-203ENST00000416380 A6NDN8 102 aa7.88□□□□□ -1.15
YIPF3-203ENST00000416380 PHF5AQ7RTV0 110 aaKnown RBP7.88□□□□□ -1.15
YIPF3-203ENST00000416380 HIST1H4GQ99525 98 aa7.88□□□□□ -1.15
YIPF3-203ENST00000416380 FAM229AH3BQW9 127 aa7.87□□□□□ -1.15
YIPF3-203ENST00000416380 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
YIPF3-203ENST00000416380 PLA2G2DQ9UNK4 145 aa7.87□□□□□ -1.15
YIPF3-203ENST00000416380 IGLV5-37A0A075B6J1 123 aa7.86□□□□□ -1.15
YIPF3-203ENST00000416380 SRSF9Q13242 221 aaKnown RBP eCLIP7.86□□□□□ -1.15
YIPF3-203ENST00000416380 COX17Q14061 63 aa7.86□□□□□ -1.15
YIPF3-203ENST00000416380 DPH3Q96FX2 82 aa7.86□□□□□ -1.15
YIPF3-203ENST00000416380 SFTA2Q6UW10 78 aa7.85□□□□□ -1.15
YIPF3-203ENST00000416380 FAM19A5Q7Z5A7 132 aaPredicted RBP7.85□□□□□ -1.15
YIPF3-203ENST00000416380 CEND1Q8N111 149 aa7.85□□□□□ -1.15
YIPF3-203ENST00000416380 SND1-IT1Q9HBX3 110 aa7.85□□□□□ -1.15
YIPF3-203ENST00000416380 SPANXB1Q9NS25 103 aaPredicted RBP7.85□□□□□ -1.15
YIPF3-203ENST00000416380 TMEM238C9JI98 176 aa7.84□□□□□ -1.15
YIPF3-203ENST00000416380 PFN2P35080 140 aa7.84□□□□□ -1.15
YIPF3-203ENST00000416380 RPL37AP61513 92 aaKnown RBP7.84□□□□□ -1.15
YIPF3-203ENST00000416380 PRR3P79522 188 aaKnown RBP7.84□□□□□ -1.15
YIPF3-203ENST00000416380 C22orf24Q9Y442 160 aa7.84□□□□□ -1.15
YIPF3-203ENST00000416380 FLG2Q5D862 2391 aaPredicted RBP7.83□□□□□ -1.16
YIPF3-203ENST00000416380 A0A0J9YXY3 114 aa7.83□□□□□ -1.16
YIPF3-203ENST00000416380 TMEM238LA0A1B0GVL6 79 aa7.83□□□□□ -1.16
YIPF3-203ENST00000416380 LCE2BO14633 110 aa7.83□□□□□ -1.16
YIPF3-203ENST00000416380 SMIM13P0DJ93 91 aa7.83□□□□□ -1.16
YIPF3-203ENST00000416380 VPREB1P12018 145 aa7.83□□□□□ -1.16
YIPF3-203ENST00000416380 HERV-K104P63124 156 aa7.83□□□□□ -1.16
YIPF3-203ENST00000416380 LITAFQ99732 161 aa7.83□□□□□ -1.16
YIPF3-203ENST00000416380 LOC107984156A0A0G2JMH3 177 aa7.82□□□□□ -1.16
YIPF3-203ENST00000416380 EIF4EBP3O60516 100 aaPredicted RBP7.82□□□□□ -1.16
YIPF3-203ENST00000416380 PLA2G1BP04054 148 aaKnown RBP7.82□□□□□ -1.16
YIPF3-203ENST00000416380 ARL17AQ8IVW1 177 aa7.82□□□□□ -1.16
YIPF3-203ENST00000416380 PSORS1C2Q9UIG4 136 aa7.82□□□□□ -1.16
YIPF3-203ENST00000416380 M0QXV9 152 aa7.81□□□□□ -1.16
YIPF3-203ENST00000416380 TIMM17BO60830 172 aa7.81□□□□□ -1.16
YIPF3-203ENST00000416380 INAFM2P0DMQ5 153 aa7.81□□□□□ -1.16
YIPF3-203ENST00000416380 MEIG1Q5JSS6 88 aa7.81□□□□□ -1.16
YIPF3-203ENST00000416380 ADAMTSL4-AS1Q5T5F5 129 aa7.81□□□□□ -1.16
YIPF3-203ENST00000416380 Q6ZVH6 145 aa7.81□□□□□ -1.16
YIPF3-203ENST00000416380 FXYD2P54710 66 aa7.8□□□□□ -1.16
YIPF3-203ENST00000416380 MIR7-3HGQ8N6C7 128 aa7.8□□□□□ -1.16
YIPF3-203ENST00000416380 C7orf33Q8WU49 177 aa7.8□□□□□ -1.16
YIPF3-203ENST00000416380 A0A0U1RRA0 63 aa7.79□□□□□ -1.16
YIPF3-203ENST00000416380 A0A1B0GV90 55 aa7.79□□□□□ -1.16
YIPF3-203ENST00000416380 COPS9Q8WXC6 57 aa7.79□□□□□ -1.16
YIPF3-203ENST00000416380 LINC00158P58513 81 aa7.78□□□□□ -1.16
YIPF3-203ENST00000416380 RPL24P83731 157 aaKnown RBP7.78□□□□□ -1.16
YIPF3-203ENST00000416380 SOSTDC1Q6X4U4 206 aa7.78□□□□□ -1.16
YIPF3-203ENST00000416380 LINC00167Q96N53 147 aa7.78□□□□□ -1.16
YIPF3-203ENST00000416380 SPANXDQ9BXN6 97 aa7.78□□□□□ -1.16
YIPF3-203ENST00000416380 NHP2Q9NX24 153 aaKnown RBP7.78□□□□□ -1.16
YIPF3-203ENST00000416380 SPANXCQ9NY87 97 aa7.78□□□□□ -1.16
YIPF3-203ENST00000416380 IFITM1P13164 125 aa7.77□□□□□ -1.17
YIPF3-203ENST00000416380 MRPL55Q7Z7F7 128 aaKnown RBP7.77□□□□□ -1.17
YIPF3-203ENST00000416380 DAND5Q8N907 189 aa7.77□□□□□ -1.17
YIPF3-203ENST00000416380 TAX1BP3O14907 124 aa7.76□□□□□ -1.17
YIPF3-203ENST00000416380 MUSTN1Q8IVN3 82 aa7.75□□□□□ -1.17
YIPF3-203ENST00000416380 IGLV1-50A0A075B6I6 118 aa7.74□□□□□ -1.17
YIPF3-203ENST00000416380 A0A1B0GWB2 263 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms