RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 Q5VSD8 79 aa19.12■□□□□ 0.65
CSNK1E-206ENST00000413574 M0QXV9 152 aa19.11■□□□□ 0.65
CSNK1E-206ENST00000413574 ADAMTSL4-AS1Q5T5F5 129 aa19.11■□□□□ 0.65
CSNK1E-206ENST00000413574 FAM229AH3BQW9 127 aa19.1■□□□□ 0.65
CSNK1E-206ENST00000413574 PYY3Q5JQD4 70 aa19.1■□□□□ 0.65
CSNK1E-206ENST00000413574 Q8NDZ9 215 aa19.1■□□□□ 0.65
CSNK1E-206ENST00000413574 KRTAP4-5Q9BYR2 181 aa19.1■□□□□ 0.65
CSNK1E-206ENST00000413574 C22orf24Q9Y442 160 aa19.09■□□□□ 0.65
CSNK1E-206ENST00000413574 PLA2G2DQ9UNK4 145 aa19.08■□□□□ 0.65
CSNK1E-206ENST00000413574 C7orf33Q8WU49 177 aa19.07■□□□□ 0.64
CSNK1E-206ENST00000413574 LITAFQ99732 161 aa19.07■□□□□ 0.64
CSNK1E-206ENST00000413574 SRRM2Q9UQ35 2752 aaKnown RBP19.07■□□□□ 0.64
CSNK1E-206ENST00000413574 SCGB1D4Q6XE38 83 aa19.05■□□□□ 0.64
CSNK1E-206ENST00000413574 PAM16Q9Y3D7 125 aa19.04■□□□□ 0.64
CSNK1E-206ENST00000413574 VPREB1P12018 145 aa19.03■□□□□ 0.64
CSNK1E-206ENST00000413574 NPC2P61916 151 aa19.03■□□□□ 0.64
CSNK1E-206ENST00000413574 KRTAP11-1Q8IUC1 163 aa19.03■□□□□ 0.64
CSNK1E-206ENST00000413574 BOD1L2Q8IYS8 172 aa19.03■□□□□ 0.64
CSNK1E-206ENST00000413574 TP73-AS1Q9UF72 201 aa19.03■□□□□ 0.64
CSNK1E-206ENST00000413574 RPL37AP61513 92 aaKnown RBP19.02■□□□□ 0.64
CSNK1E-206ENST00000413574 VAMP8Q9BV40 100 aa19.02■□□□□ 0.64
CSNK1E-206ENST00000413574 EIF4EBP3O60516 100 aaPredicted RBP19.01■□□□□ 0.63
CSNK1E-206ENST00000413574 TIMM17BO60830 172 aa19.01■□□□□ 0.63
CSNK1E-206ENST00000413574 IGLV5-37A0A075B6J1 123 aa19■□□□□ 0.63
CSNK1E-206ENST00000413574 SPATA45Q537H7 98 aa19■□□□□ 0.63
CSNK1E-206ENST00000413574 NKAPP1Q8N9T2 125 aa19■□□□□ 0.63
CSNK1E-206ENST00000413574 KRTAP10-4P60372 401 aaPredicted RBP19■□□□□ 0.63
CSNK1E-206ENST00000413574 SOSTDC1Q6X4U4 206 aa19■□□□□ 0.63
CSNK1E-206ENST00000413574 MRPL55Q7Z7F7 128 aaKnown RBP19■□□□□ 0.63
CSNK1E-206ENST00000413574 ABCA13Q86UQ4 5058 aa18.99■□□□□ 0.63
CSNK1E-206ENST00000413574 GAGE10A6NGK3 116 aa18.99■□□□□ 0.63
CSNK1E-206ENST00000413574 RPL24P83731 157 aaKnown RBP18.99■□□□□ 0.63
CSNK1E-206ENST00000413574 PLA2G1BP04054 148 aaKnown RBP18.98■□□□□ 0.63
CSNK1E-206ENST00000413574 PRR3P79522 188 aaKnown RBP18.98■□□□□ 0.63
CSNK1E-206ENST00000413574 UBE2BP63146 152 aa18.97■□□□□ 0.63
CSNK1E-206ENST00000413574 LINC00167Q96N53 147 aa18.97■□□□□ 0.63
CSNK1E-206ENST00000413574 LOC107984156A0A0G2JMH3 177 aa18.96■□□□□ 0.63
CSNK1E-206ENST00000413574 ARL17AQ8IVW1 177 aa18.96■□□□□ 0.63
CSNK1E-206ENST00000413574 LBHQ53QV2 105 aaPredicted RBP18.96■□□□□ 0.63
CSNK1E-206ENST00000413574 MIEN1Q9BRT3 115 aa18.96■□□□□ 0.63
CSNK1E-206ENST00000413574 PSORS1C2Q9UIG4 136 aa18.95■□□□□ 0.62
CSNK1E-206ENST00000413574 RPL37AP8A6NKH3 93 aa18.94■□□□□ 0.62
CSNK1E-206ENST00000413574 COX8AP10176 69 aa18.94■□□□□ 0.62
CSNK1E-206ENST00000413574 C14orf144Q96I85 54 aa18.94■□□□□ 0.62
CSNK1E-206ENST00000413574 LINC00308Q8TCZ7 52 aa18.93■□□□□ 0.62
CSNK1E-206ENST00000413574 TMEM238C9JI98 176 aa18.92■□□□□ 0.62
CSNK1E-206ENST00000413574 NCR3O14931 201 aa18.91■□□□□ 0.62
CSNK1E-206ENST00000413574 SPANXDQ9BXN6 97 aa18.9■□□□□ 0.62
CSNK1E-206ENST00000413574 SPANXCQ9NY87 97 aa18.9■□□□□ 0.62
CSNK1E-206ENST00000413574 IGKV2-28A0A075B6P5 120 aa18.87■□□□□ 0.61
CSNK1E-206ENST00000413574 IGKV2D-28P01615 120 aa18.87■□□□□ 0.61
CSNK1E-206ENST00000413574 C1orf137Q5JT78 98 aa18.86■□□□□ 0.61
CSNK1E-206ENST00000413574 M0R378 163 aa18.85■□□□□ 0.61
CSNK1E-206ENST00000413574 HNRNPA3P51991 378 aaKnown RBP18.85■□□□□ 0.61
CSNK1E-206ENST00000413574 DLEU1O43261 78 aa18.84■□□□□ 0.61
CSNK1E-206ENST00000413574 PKHD1L1Q86WI1 4243 aa18.84■□□□□ 0.61
CSNK1E-206ENST00000413574 IGLV1-50A0A075B6I6 118 aa18.82■□□□□ 0.6
CSNK1E-206ENST00000413574 LOC105371267A0A1B0GV96 52 aa18.82■□□□□ 0.6
CSNK1E-206ENST00000413574 NDUFC2O95298 119 aa18.82■□□□□ 0.6
CSNK1E-206ENST00000413574 MUSTN1Q8IVN3 82 aa18.82■□□□□ 0.6
CSNK1E-206ENST00000413574 SLC25A34Q6PIV7 304 aa18.81■□□□□ 0.6
CSNK1E-206ENST00000413574 Q6ZVH6 145 aa18.8■□□□□ 0.6
CSNK1E-206ENST00000413574 SPANXB1Q9NS25 103 aaPredicted RBP18.8■□□□□ 0.6
CSNK1E-206ENST00000413574 PCLOQ9Y6V0 5065 aa18.8■□□□□ 0.6
CSNK1E-206ENST00000413574 SRSF9Q13242 221 aaKnown RBP eCLIP18.79■□□□□ 0.6
CSNK1E-206ENST00000413574 IFITM1P13164 125 aa18.78■□□□□ 0.6
CSNK1E-206ENST00000413574 TRBV10-3A0A0K0K1G6 114 aa18.76■□□□□ 0.59
CSNK1E-206ENST00000413574 TRBV10-2A0A0K0K1G8 114 aa18.76■□□□□ 0.59
CSNK1E-206ENST00000413574 INAFM2P0DMQ5 153 aa18.76■□□□□ 0.59
CSNK1E-206ENST00000413574 S100A12P80511 92 aa18.75■□□□□ 0.59
CSNK1E-206ENST00000413574 C2orf91Q6ZV80 131 aa18.74■□□□□ 0.59
CSNK1E-206ENST00000413574 IGLV7-43P04211 117 aa18.73■□□□□ 0.59
CSNK1E-206ENST00000413574 COPS9Q8WXC6 57 aa18.73■□□□□ 0.59
CSNK1E-206ENST00000413574 DDTP30046 118 aa18.71■□□□□ 0.59
CSNK1E-206ENST00000413574 TMEM126AQ9H061 195 aa18.71■□□□□ 0.58
CSNK1E-206ENST00000413574 S100A7L2Q5SY68 101 aa18.7■□□□□ 0.58
CSNK1E-206ENST00000413574 REG3GQ6UW15 175 aa18.7■□□□□ 0.58
CSNK1E-206ENST00000413574 HIST1H4GQ99525 98 aa18.7■□□□□ 0.58
CSNK1E-206ENST00000413574 PPDPFQ9H3Y8 114 aa18.7■□□□□ 0.58
CSNK1E-206ENST00000413574 BCE1O60756 84 aa18.69■□□□□ 0.58
CSNK1E-206ENST00000413574 SMIM6P0DI80 62 aa18.69■□□□□ 0.58
CSNK1E-206ENST00000413574 MYCBP2O75592 4640 aa18.69■□□□□ 0.58
CSNK1E-206ENST00000413574 HIGD1BQ9P298 99 aa18.68■□□□□ 0.58
CSNK1E-206ENST00000413574 FLG2Q5D862 2391 aaPredicted RBP18.68■□□□□ 0.58
CSNK1E-206ENST00000413574 IGLV6-57P01721 117 aa18.67■□□□□ 0.58
CSNK1E-206ENST00000413574 LINC00337Q8N6G1 96 aa18.66■□□□□ 0.58
CSNK1E-206ENST00000413574 KCNQ1DNQ9H478 68 aa18.66■□□□□ 0.58
CSNK1E-206ENST00000413574 OR13C6PQ8NH95 151 aa18.65■□□□□ 0.58
CSNK1E-206ENST00000413574 PRYO14603 147 aa18.63■□□□□ 0.57
CSNK1E-206ENST00000413574 LINC00518Q8N0U6 118 aa18.63■□□□□ 0.57
CSNK1E-206ENST00000413574 LRP1Q07954 4544 aaKnown RBP18.62■□□□□ 0.57
CSNK1E-206ENST00000413574 A4D1N5 150 aa18.62■□□□□ 0.57
CSNK1E-206ENST00000413574 SPINK6Q6UWN8 80 aa18.62■□□□□ 0.57
CSNK1E-206ENST00000413574 FAM19A1Q7Z5A9 133 aa18.6■□□□□ 0.57
CSNK1E-206ENST00000413574 PRO1933Q9H354 126 aa18.6■□□□□ 0.57
CSNK1E-206ENST00000413574 ZNF861PO60384 105 aa18.6■□□□□ 0.57
CSNK1E-206ENST00000413574 PRLHP81277 87 aa18.6■□□□□ 0.57
CSNK1E-206ENST00000413574 UQCR10Q9UDW1 63 aa18.6■□□□□ 0.57
CSNK1E-206ENST00000413574 FAT3Q8TDW7 4589 aa18.59■□□□□ 0.57
CSNK1E-206ENST00000413574 SPRR1AP35321 89 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms