RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 HIST1H2BCP62807 126 aa10.4□□□□□ -0.74
HSPG2-204ENST00000412328 HIST2H2BEQ16778 126 aa10.4□□□□□ -0.74
HSPG2-204ENST00000412328 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.4□□□□□ -0.74
HSPG2-204ENST00000412328 NKAPP1Q8N9T2 125 aa10.4□□□□□ -0.74
HSPG2-204ENST00000412328 HIST1H2BHQ93079 126 aa10.4□□□□□ -0.74
HSPG2-204ENST00000412328 HIST1H2BNQ99877 126 aa10.4□□□□□ -0.74
HSPG2-204ENST00000412328 HIST1H2BMQ99879 126 aa10.4□□□□□ -0.74
HSPG2-204ENST00000412328 H0Y8G0 127 aa10.39□□□□□ -0.75
HSPG2-204ENST00000412328 IGLV1-50A0A075B6I6 118 aa10.38□□□□□ -0.75
HSPG2-204ENST00000412328 IGKV2-28A0A075B6P5 120 aa10.37□□□□□ -0.75
HSPG2-204ENST00000412328 IGKV2D-28P01615 120 aa10.37□□□□□ -0.75
HSPG2-204ENST00000412328 HSPB8Q9UJY1 196 aa10.37□□□□□ -0.75
HSPG2-204ENST00000412328 SMIM13P0DJ93 91 aa10.36□□□□□ -0.75
HSPG2-204ENST00000412328 FABP4P15090 132 aa10.36□□□□□ -0.75
HSPG2-204ENST00000412328 PLNP26678 52 aa10.36□□□□□ -0.75
HSPG2-204ENST00000412328 PMCHL2Q9BQD1 86 aa10.36□□□□□ -0.75
HSPG2-204ENST00000412328 HERV-K104P63124 156 aa10.34□□□□□ -0.75
HSPG2-204ENST00000412328 NDUFA12Q9UI09 145 aa10.34□□□□□ -0.75
HSPG2-204ENST00000412328 A0A0U1RRA0 63 aa10.33□□□□□ -0.76
HSPG2-204ENST00000412328 TMEM238C9JI98 176 aa10.33□□□□□ -0.76
HSPG2-204ENST00000412328 M0R378 163 aa10.33□□□□□ -0.76
HSPG2-204ENST00000412328 LEPROTO15243 131 aa10.33□□□□□ -0.76
HSPG2-204ENST00000412328 DPM2O94777 84 aa10.33□□□□□ -0.76
HSPG2-204ENST00000412328 RPL28P46779 137 aaKnown RBP10.33□□□□□ -0.76
HSPG2-204ENST00000412328 LINC00158P58513 81 aa10.33□□□□□ -0.76
HSPG2-204ENST00000412328 TMEM126AQ9H061 195 aa10.33□□□□□ -0.76
HSPG2-204ENST00000412328 A0A087X002 238 aa10.32□□□□□ -0.76
HSPG2-204ENST00000412328 RPL24P83731 157 aaKnown RBP10.32□□□□□ -0.76
HSPG2-204ENST00000412328 MIR7-3HGQ8N6C7 128 aa10.32□□□□□ -0.76
HSPG2-204ENST00000412328 IGKCP01834 107 aa10.31□□□□□ -0.76
HSPG2-204ENST00000412328 J3QQQ9 107 aa10.3□□□□□ -0.76
HSPG2-204ENST00000412328 MEIG1Q5JSS6 88 aa10.3□□□□□ -0.76
HSPG2-204ENST00000412328 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
HSPG2-204ENST00000412328 LPAP08519 4548 aa10.3□□□□□ -0.76
HSPG2-204ENST00000412328 MYMXA0A1B0GTQ4 84 aa10.29□□□□□ -0.76
HSPG2-204ENST00000412328 RPL13AP40429 203 aaKnown RBP10.29□□□□□ -0.76
HSPG2-204ENST00000412328 PRLHP81277 87 aa10.29□□□□□ -0.76
HSPG2-204ENST00000412328 COA6Q5JTJ3 125 aaKnown RBP10.29□□□□□ -0.76
HSPG2-204ENST00000412328 LOC107984156A0A0G2JMH3 177 aa10.28□□□□□ -0.76
HSPG2-204ENST00000412328 SYS1-DBNDD2H3BUS1 97 aa10.28□□□□□ -0.76
HSPG2-204ENST00000412328 ARL17AQ8IVW1 177 aa10.28□□□□□ -0.76
HSPG2-204ENST00000412328 MAP1LC3CQ9BXW4 147 aa10.28□□□□□ -0.76
HSPG2-204ENST00000412328 UBE2AP49459 152 aa10.27□□□□□ -0.77
HSPG2-204ENST00000412328 NMUP48645 174 aa10.26□□□□□ -0.77
HSPG2-204ENST00000412328 LINC01545Q5VT33 79 aa10.26□□□□□ -0.77
HSPG2-204ENST00000412328 BOD1L2Q8IYS8 172 aa10.26□□□□□ -0.77
HSPG2-204ENST00000412328 DAND5Q8N907 189 aa10.26□□□□□ -0.77
HSPG2-204ENST00000412328 RNF213Q63HN8 5207 aa10.26□□□□□ -0.77
HSPG2-204ENST00000412328 E9PLD3 99 aa10.25□□□□□ -0.77
HSPG2-204ENST00000412328 NCR3O14931 201 aa10.25□□□□□ -0.77
HSPG2-204ENST00000412328 SPRR1AP35321 89 aa10.25□□□□□ -0.77
HSPG2-204ENST00000412328 HERVK_113P61574 105 aa10.25□□□□□ -0.77
HSPG2-204ENST00000412328 KRTAP13-2Q52LG2 175 aa10.25□□□□□ -0.77
HSPG2-204ENST00000412328 LINC00587B1AMM8 73 aa10.24□□□□□ -0.77
HSPG2-204ENST00000412328 KRTAP4-16G5E9R7 235 aaPredicted RBP10.24□□□□□ -0.77
HSPG2-204ENST00000412328 FAM19A1Q7Z5A9 133 aa10.24□□□□□ -0.77
HSPG2-204ENST00000412328 IGKV2D-26A0A0A0MRZ7 120 aa10.23□□□□□ -0.77
HSPG2-204ENST00000412328 ANAPC11Q9NYG5 84 aa10.23□□□□□ -0.77
HSPG2-204ENST00000412328 PRYO14603 147 aa10.22□□□□□ -0.77
HSPG2-204ENST00000412328 EIF4EBP3O60516 100 aaPredicted RBP10.22□□□□□ -0.77
HSPG2-204ENST00000412328 LGALS3P17931 250 aaKnown RBP10.22□□□□□ -0.77
HSPG2-204ENST00000412328 C3orf79P0CE67 100 aa10.21□□□□□ -0.77
HSPG2-204ENST00000412328 FAM229BQ4G0N7 80 aa10.21□□□□□ -0.77
HSPG2-204ENST00000412328 SOSTDC1Q6X4U4 206 aa10.21□□□□□ -0.77
HSPG2-204ENST00000412328 KCNQ1DNQ9H478 68 aa10.21□□□□□ -0.77
HSPG2-204ENST00000412328 A0A0J9YXY3 114 aa10.2□□□□□ -0.78
HSPG2-204ENST00000412328 TRBV10-3A0A0K0K1G6 114 aa10.2□□□□□ -0.78
HSPG2-204ENST00000412328 PET117Q6UWS5 81 aa10.2□□□□□ -0.78
HSPG2-204ENST00000412328 LITAFQ99732 161 aa10.2□□□□□ -0.78
HSPG2-204ENST00000412328 ATP6V1G1O75348 118 aa10.19□□□□□ -0.78
HSPG2-204ENST00000412328 CRYGAP11844 174 aa10.19□□□□□ -0.78
HSPG2-204ENST00000412328 ADAMTSL4-AS1Q5T5F5 129 aa10.19□□□□□ -0.78
HSPG2-204ENST00000412328 LINC00337Q8N6G1 96 aa10.19□□□□□ -0.78
HSPG2-204ENST00000412328 TRBV10-2A0A0K0K1G8 114 aa10.17□□□□□ -0.78
HSPG2-204ENST00000412328 NDUFC2O95298 119 aa10.16□□□□□ -0.78
HSPG2-204ENST00000412328 TYMSOSQ8TAI1 123 aa10.15□□□□□ -0.78
HSPG2-204ENST00000412328 HIGD2AQ9BW72 106 aa10.15□□□□□ -0.78
HSPG2-204ENST00000412328 TTTY13Q9BZ97 58 aa10.15□□□□□ -0.78
HSPG2-204ENST00000412328 SPANXB1Q9NS25 103 aaPredicted RBP10.15□□□□□ -0.78
HSPG2-204ENST00000412328 IGLV6-57P01721 117 aa10.14□□□□□ -0.79
HSPG2-204ENST00000412328 SMCR5Q8TEV8 140 aa10.14□□□□□ -0.79
HSPG2-204ENST00000412328 SPRR4Q96PI1 79 aa10.14□□□□□ -0.79
HSPG2-204ENST00000412328 B5MCH6 92 aa10.11□□□□□ -0.79
HSPG2-204ENST00000412328 TIMM17BO60830 172 aa10.11□□□□□ -0.79
HSPG2-204ENST00000412328 DDTP30046 118 aa10.11□□□□□ -0.79
HSPG2-204ENST00000412328 KRTDAPP60985 99 aa10.11□□□□□ -0.79
HSPG2-204ENST00000412328 NPC2P61916 151 aa10.11□□□□□ -0.79
HSPG2-204ENST00000412328 C3orf22Q8N5N4 141 aa10.1□□□□□ -0.79
HSPG2-204ENST00000412328 MIEN1Q9BRT3 115 aa10.1□□□□□ -0.79
HSPG2-204ENST00000412328 ANKRD39Q53RE8 183 aa10.09□□□□□ -0.79
HSPG2-204ENST00000412328 LINC00308Q8TCZ7 52 aa10.09□□□□□ -0.79
HSPG2-204ENST00000412328 Q9BRP9 147 aa10.09□□□□□ -0.79
HSPG2-204ENST00000412328 ETDCA0A1B0GVM5 59 aa10.08□□□□□ -0.8
HSPG2-204ENST00000412328 ZNF815PA8K554 130 aa10.08□□□□□ -0.8
HSPG2-204ENST00000412328 TSPAN13O95857 204 aa10.07□□□□□ -0.8
HSPG2-204ENST00000412328 S100A1P23297 94 aa10.07□□□□□ -0.8
HSPG2-204ENST00000412328 LINC00483Q53H64 154 aa10.07□□□□□ -0.8
HSPG2-204ENST00000412328 Q6ZRX8 168 aa10.07□□□□□ -0.8
HSPG2-204ENST00000412328 LINC00304Q8N9R0 145 aa10.07□□□□□ -0.8
HSPG2-204ENST00000412328 ERC2-IT1O76042 136 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms