RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 LINC00304Q8N9R0 145 aa3.49□□□□□ -1.85
HMGN1P20-201ENST00000411849 IGLV5-45A0A087WSX0 123 aa3.48□□□□□ -1.85
HMGN1P20-201ENST00000411849 NDUFC2-KCTD14E9PQ53 114 aa3.48□□□□□ -1.85
HMGN1P20-201ENST00000411849 LBHQ53QV2 105 aaPredicted RBP3.48□□□□□ -1.85
HMGN1P20-201ENST00000411849 C2orf82Q6UX34 121 aa3.48□□□□□ -1.85
HMGN1P20-201ENST00000411849 Q8IZM0 81 aa3.48□□□□□ -1.85
HMGN1P20-201ENST00000411849 CHCHD1Q96BP2 118 aaKnown RBP3.48□□□□□ -1.85
HMGN1P20-201ENST00000411849 PACRGQ96M98 296 aaPredicted RBP3.48□□□□□ -1.85
HMGN1P20-201ENST00000411849 GEMIN7Q9H840 131 aaKnown RBP3.48□□□□□ -1.85
HMGN1P20-201ENST00000411849 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
HMGN1P20-201ENST00000411849 SMIM1B2RUZ4 78 aa3.47□□□□□ -1.85
HMGN1P20-201ENST00000411849 ATP5LO75964 103 aa3.47□□□□□ -1.85
HMGN1P20-201ENST00000411849 IGLC3P0DOY3 106 aa3.47□□□□□ -1.85
HMGN1P20-201ENST00000411849 FAM229BQ4G0N7 80 aa3.47□□□□□ -1.85
HMGN1P20-201ENST00000411849 C6orf226Q5I0X4 101 aa3.47□□□□□ -1.85
HMGN1P20-201ENST00000411849 C9orf129Q5T035 196 aaKnown RBP3.47□□□□□ -1.85
HMGN1P20-201ENST00000411849 LINC00337Q8N6G1 96 aa3.47□□□□□ -1.85
HMGN1P20-201ENST00000411849 PPDPFQ9H3Y8 114 aa3.47□□□□□ -1.85
HMGN1P20-201ENST00000411849 IGKV2D-26A0A0A0MRZ7 120 aa3.46□□□□□ -1.86
HMGN1P20-201ENST00000411849 BCE1O60756 84 aa3.46□□□□□ -1.86
HMGN1P20-201ENST00000411849 SCO1O75880 301 aa3.46□□□□□ -1.86
HMGN1P20-201ENST00000411849 ASB16-AS1Q495Z4 193 aa3.46□□□□□ -1.86
HMGN1P20-201ENST00000411849 KRTAP13-2Q52LG2 175 aa3.46□□□□□ -1.86
HMGN1P20-201ENST00000411849 BAGE3Q86Y29 109 aa3.46□□□□□ -1.86
HMGN1P20-201ENST00000411849 FAM19A2Q8N3H0 131 aa3.46□□□□□ -1.86
HMGN1P20-201ENST00000411849 LINC00469Q8N7U9 141 aa3.46□□□□□ -1.86
HMGN1P20-201ENST00000411849 TOMM7Q9P0U1 55 aa3.46□□□□□ -1.86
HMGN1P20-201ENST00000411849 C22orf24Q9Y442 160 aa3.46□□□□□ -1.86
HMGN1P20-201ENST00000411849 TRAV12-1A0A0B4J245 112 aa3.45□□□□□ -1.86
HMGN1P20-201ENST00000411849 IGLV5-39A0A0G2JS06 123 aa3.45□□□□□ -1.86
HMGN1P20-201ENST00000411849 HSBP1O75506 76 aa3.45□□□□□ -1.86
HMGN1P20-201ENST00000411849 PRSS2P07478 247 aa3.45□□□□□ -1.86
HMGN1P20-201ENST00000411849 SPINK8P0C7L1 97 aa3.45□□□□□ -1.86
HMGN1P20-201ENST00000411849 ZNF22P17026 224 aaPredicted RBP3.45□□□□□ -1.86
HMGN1P20-201ENST00000411849 NDUFA6P56556 154 aa3.45□□□□□ -1.86
HMGN1P20-201ENST00000411849 SEC61BP60468 96 aaKnown RBP3.45□□□□□ -1.86
HMGN1P20-201ENST00000411849 FP248Q71RG6 208 aaPredicted RBP3.45□□□□□ -1.86
HMGN1P20-201ENST00000411849 MRPL55Q7Z7F7 128 aaKnown RBP3.45□□□□□ -1.86
HMGN1P20-201ENST00000411849 COX7B2Q8TF08 81 aa3.45□□□□□ -1.86
HMGN1P20-201ENST00000411849 IFI27L1Q96BM0 104 aa3.45□□□□□ -1.86
HMGN1P20-201ENST00000411849 TP73-AS1Q9UF72 201 aa3.45□□□□□ -1.86
HMGN1P20-201ENST00000411849 C11orf86A6NJI1 115 aa3.44□□□□□ -1.86
HMGN1P20-201ENST00000411849 F8VRH5 84 aa3.44□□□□□ -1.86
HMGN1P20-201ENST00000411849 H3BRM9 83 aa3.44□□□□□ -1.86
HMGN1P20-201ENST00000411849 SERF1AO75920 110 aa3.44□□□□□ -1.86
HMGN1P20-201ENST00000411849 CXCL5P42830 114 aa3.44□□□□□ -1.86
HMGN1P20-201ENST00000411849 CKS1BP61024 79 aa3.44□□□□□ -1.86
HMGN1P20-201ENST00000411849 ANAPC11Q9NYG5 84 aa3.44□□□□□ -1.86
HMGN1P20-201ENST00000411849 CHTOPQ9Y3Y2 248 aaKnown RBP3.44□□□□□ -1.86
HMGN1P20-201ENST00000411849 HIST1H2BKO60814 126 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 LEPROTL1O95214 131 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 HIST1H2BJP06899 126 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 HIST1H2BOP23527 126 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 HIST1H2BBP33778 126 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 UBE2AP49459 152 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 HIST1H2BDP58876 126 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 HIST1H2BCP62807 126 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 HIST2H2BEQ16778 126 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 SPAG11AQ6PDA7 123 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 HIST1H2BHQ93079 126 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 HIST1H2BNQ99877 126 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 HIST1H2BMQ99879 126 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 XAGE1AQ9HD64 81 aa3.43□□□□□ -1.86
HMGN1P20-201ENST00000411849 CFC1BP0CG36 223 aa3.42□□□□□ -1.86
HMGN1P20-201ENST00000411849 KRTAP13-3Q3SY46 172 aa3.42□□□□□ -1.86
HMGN1P20-201ENST00000411849 TMEM170BQ5T4T1 132 aa3.42□□□□□ -1.86
HMGN1P20-201ENST00000411849 TMEM223A0PJW6 202 aa3.41□□□□□ -1.86
HMGN1P20-201ENST00000411849 RPL37AP8A6NKH3 93 aa3.41□□□□□ -1.86
HMGN1P20-201ENST00000411849 FABP4P15090 132 aa3.41□□□□□ -1.86
HMGN1P20-201ENST00000411849 KRTAP13-1Q8IUC0 172 aa3.41□□□□□ -1.86
HMGN1P20-201ENST00000411849 LINC00167Q96N53 147 aa3.41□□□□□ -1.86
HMGN1P20-201ENST00000411849 COA6Q5JTJ3 125 aaKnown RBP3.4□□□□□ -1.87
HMGN1P20-201ENST00000411849 NKAPP1Q8N9T2 125 aa3.4□□□□□ -1.87
HMGN1P20-201ENST00000411849 ZNF625Q96I27 306 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P20-201ENST00000411849 KRTAP4-1Q9BYQ7 146 aa3.4□□□□□ -1.87
HMGN1P20-201ENST00000411849 HSPB8Q9UJY1 196 aa3.4□□□□□ -1.87
HMGN1P20-201ENST00000411849 GAGE10A6NGK3 116 aa3.39□□□□□ -1.87
HMGN1P20-201ENST00000411849 H0Y8G0 127 aa3.39□□□□□ -1.87
HMGN1P20-201ENST00000411849 PFN2P35080 140 aa3.39□□□□□ -1.87
HMGN1P20-201ENST00000411849 COX17Q14061 63 aa3.39□□□□□ -1.87
HMGN1P20-201ENST00000411849 SFTA2Q6UW10 78 aa3.39□□□□□ -1.87
HMGN1P20-201ENST00000411849 MAP1LC3CQ9BXW4 147 aa3.39□□□□□ -1.87
HMGN1P20-201ENST00000411849 NDUFA12Q9UI09 145 aa3.39□□□□□ -1.87
HMGN1P20-201ENST00000411849 ERG28Q9UKR5 140 aa3.39□□□□□ -1.87
HMGN1P20-201ENST00000411849 IGLV5-37A0A075B6J1 123 aa3.38□□□□□ -1.87
HMGN1P20-201ENST00000411849 DPM2O94777 84 aa3.38□□□□□ -1.87
HMGN1P20-201ENST00000411849 C3orf22Q8N5N4 141 aa3.38□□□□□ -1.87
HMGN1P20-201ENST00000411849 PMCHL2Q9BQD1 86 aa3.38□□□□□ -1.87
HMGN1P20-201ENST00000411849 SND1-IT1Q9HBX3 110 aa3.38□□□□□ -1.87
HMGN1P20-201ENST00000411849 TMA7Q9Y2S6 64 aaKnown RBP3.38□□□□□ -1.87
HMGN1P20-201ENST00000411849 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
HMGN1P20-201ENST00000411849 IGKV2-28A0A075B6P5 120 aa3.37□□□□□ -1.87
HMGN1P20-201ENST00000411849 SYS1-DBNDD2H3BUS1 97 aa3.37□□□□□ -1.87
HMGN1P20-201ENST00000411849 LEPROTO15243 131 aa3.37□□□□□ -1.87
HMGN1P20-201ENST00000411849 IGKV2D-28P01615 120 aa3.37□□□□□ -1.87
HMGN1P20-201ENST00000411849 IGKCP01834 107 aa3.37□□□□□ -1.87
HMGN1P20-201ENST00000411849 S100A6P06703 90 aa3.37□□□□□ -1.87
HMGN1P20-201ENST00000411849 PLNP26678 52 aa3.37□□□□□ -1.87
HMGN1P20-201ENST00000411849 TSPEAR-AS2P59090 65 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms