RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 MT1HL1P0DM35 61 aa19.03■□□□□ 0.64
TRAF3IP1-203ENST00000409739 LINC00158P58513 81 aa19.03■□□□□ 0.64
TRAF3IP1-203ENST00000409739 HERVK_113P61574 105 aa19.02■□□□□ 0.64
TRAF3IP1-203ENST00000409739 HERV-K104P63124 156 aa19.02■□□□□ 0.64
TRAF3IP1-203ENST00000409739 NKAPP1Q8N9T2 125 aa19.02■□□□□ 0.64
TRAF3IP1-203ENST00000409739 PLEKHB2Q96CS7 222 aa19.02■□□□□ 0.64
TRAF3IP1-203ENST00000409739 REG3GQ6UW15 175 aa19.01■□□□□ 0.63
TRAF3IP1-203ENST00000409739 LINC00167Q96N53 147 aa19.01■□□□□ 0.63
TRAF3IP1-203ENST00000409739 A0A0U1RRA0 63 aa19■□□□□ 0.63
TRAF3IP1-203ENST00000409739 MYMXA0A1B0GTQ4 84 aa18.99■□□□□ 0.63
TRAF3IP1-203ENST00000409739 SMIM13P0DJ93 91 aa18.99■□□□□ 0.63
TRAF3IP1-203ENST00000409739 VPREB1P12018 145 aa18.99■□□□□ 0.63
TRAF3IP1-203ENST00000409739 MEIG1Q5JSS6 88 aa18.99■□□□□ 0.63
TRAF3IP1-203ENST00000409739 GAGE10A6NGK3 116 aa18.98■□□□□ 0.63
TRAF3IP1-203ENST00000409739 J3QQQ9 107 aa18.98■□□□□ 0.63
TRAF3IP1-203ENST00000409739 RPL37AP8A6NKH3 93 aa18.97■□□□□ 0.63
TRAF3IP1-203ENST00000409739 LINC01545Q5VT33 79 aa18.97■□□□□ 0.63
TRAF3IP1-203ENST00000409739 LINC01600Q96MT4 127 aa18.97■□□□□ 0.63
TRAF3IP1-203ENST00000409739 PET117Q6UWS5 81 aa18.96■□□□□ 0.63
TRAF3IP1-203ENST00000409739 Q8NDZ9 215 aa18.96■□□□□ 0.63
TRAF3IP1-203ENST00000409739 C3orf79P0CE67 100 aa18.95■□□□□ 0.62
TRAF3IP1-203ENST00000409739 DIRC1Q969H9 104 aa18.94■□□□□ 0.62
TRAF3IP1-203ENST00000409739 RPL24P83731 157 aaKnown RBP18.93■□□□□ 0.62
TRAF3IP1-203ENST00000409739 LGALS3P17931 250 aaKnown RBP18.92■□□□□ 0.62
TRAF3IP1-203ENST00000409739 LINC00587B1AMM8 73 aa18.91■□□□□ 0.62
TRAF3IP1-203ENST00000409739 E9PLD3 99 aa18.91■□□□□ 0.62
TRAF3IP1-203ENST00000409739 H0Y9J4 135 aa18.91■□□□□ 0.62
TRAF3IP1-203ENST00000409739 NMUP48645 174 aa18.91■□□□□ 0.62
TRAF3IP1-203ENST00000409739 MIR7-3HGQ8N6C7 128 aa18.91■□□□□ 0.62
TRAF3IP1-203ENST00000409739 TNXBP22105 4242 aa18.9■□□□□ 0.62
TRAF3IP1-203ENST00000409739 KRTDAPP60985 99 aa18.89■□□□□ 0.61
TRAF3IP1-203ENST00000409739 BCE1O60756 84 aa18.88■□□□□ 0.61
TRAF3IP1-203ENST00000409739 IGKV2-28A0A075B6P5 120 aa18.87■□□□□ 0.61
TRAF3IP1-203ENST00000409739 IGKV2D-28P01615 120 aa18.87■□□□□ 0.61
TRAF3IP1-203ENST00000409739 ZNF861PO60384 105 aa18.86■□□□□ 0.61
TRAF3IP1-203ENST00000409739 IGLV1-50A0A075B6I6 118 aa18.84■□□□□ 0.61
TRAF3IP1-203ENST00000409739 BOD1L2Q8IYS8 172 aa18.82■□□□□ 0.6
TRAF3IP1-203ENST00000409739 DAND5Q8N907 189 aa18.82■□□□□ 0.6
TRAF3IP1-203ENST00000409739 KRTAP10-8P60410 259 aa18.8■□□□□ 0.6
TRAF3IP1-203ENST00000409739 RPL28P46779 137 aaKnown RBP18.78■□□□□ 0.6
TRAF3IP1-203ENST00000409739 A0A0J9YXY3 114 aa18.77■□□□□ 0.6
TRAF3IP1-203ENST00000409739 C20orf202A1L168 122 aa18.77■□□□□ 0.6
TRAF3IP1-203ENST00000409739 HIST3H2BBQ8N257 126 aa18.77■□□□□ 0.6
TRAF3IP1-203ENST00000409739 TMEM238C9JI98 176 aa18.76■□□□□ 0.59
TRAF3IP1-203ENST00000409739 M0R378 163 aa18.76■□□□□ 0.59
TRAF3IP1-203ENST00000409739 KRTAP1-4P0C5Y4 121 aa18.76■□□□□ 0.59
TRAF3IP1-203ENST00000409739 IGKV2D-26A0A0A0MRZ7 120 aa18.75■□□□□ 0.59
TRAF3IP1-203ENST00000409739 LOC107984156A0A0G2JMH3 177 aa18.75■□□□□ 0.59
TRAF3IP1-203ENST00000409739 NCR3O14931 201 aa18.75■□□□□ 0.59
TRAF3IP1-203ENST00000409739 KRTAP13-1Q8IUC0 172 aa18.75■□□□□ 0.59
TRAF3IP1-203ENST00000409739 ARL17AQ8IVW1 177 aa18.75■□□□□ 0.59
TRAF3IP1-203ENST00000409739 TMEM126AQ9H061 195 aa18.75■□□□□ 0.59
TRAF3IP1-203ENST00000409739 UBE2AP49459 152 aa18.72■□□□□ 0.59
TRAF3IP1-203ENST00000409739 HIST1H2BLQ99880 126 aa18.71■□□□□ 0.59
TRAF3IP1-203ENST00000409739 S100A2P29034 98 aa18.7■□□□□ 0.58
TRAF3IP1-203ENST00000409739 ADAMTSL4-AS1Q5T5F5 129 aa18.69■□□□□ 0.58
TRAF3IP1-203ENST00000409739 ATOH7Q8N100 152 aa18.69■□□□□ 0.58
TRAF3IP1-203ENST00000409739 PRR26Q8N8Z3 221 aa18.69■□□□□ 0.58
TRAF3IP1-203ENST00000409739 TTTY13Q9BZ97 58 aa18.69■□□□□ 0.58
TRAF3IP1-203ENST00000409739 S100A6P06703 90 aa18.68■□□□□ 0.58
TRAF3IP1-203ENST00000409739 MIEN1Q9BRT3 115 aa18.68■□□□□ 0.58
TRAF3IP1-203ENST00000409739 ZNF815PA8K554 130 aa18.67■□□□□ 0.58
TRAF3IP1-203ENST00000409739 PRLHP81277 87 aa18.67■□□□□ 0.58
TRAF3IP1-203ENST00000409739 FAM19A1Q7Z5A9 133 aa18.67■□□□□ 0.58
TRAF3IP1-203ENST00000409739 ANKRD39Q53RE8 183 aa18.65■□□□□ 0.58
TRAF3IP1-203ENST00000409739 SOSTDC1Q6X4U4 206 aa18.65■□□□□ 0.58
TRAF3IP1-203ENST00000409739 LITAFQ99732 161 aa18.65■□□□□ 0.58
TRAF3IP1-203ENST00000409739 PRYO14603 147 aa18.63■□□□□ 0.57
TRAF3IP1-203ENST00000409739 EIF4EBP3O60516 100 aaPredicted RBP18.63■□□□□ 0.57
TRAF3IP1-203ENST00000409739 AKR1D1P51857 326 aa18.63■□□□□ 0.57
TRAF3IP1-203ENST00000409739 NPC2P61916 151 aa18.63■□□□□ 0.57
TRAF3IP1-203ENST00000409739 TRBV10-3A0A0K0K1G6 114 aa18.62■□□□□ 0.57
TRAF3IP1-203ENST00000409739 TIMM17BO60830 172 aa18.62■□□□□ 0.57
TRAF3IP1-203ENST00000409739 TRBV10-2A0A0K0K1G8 114 aa18.61■□□□□ 0.57
TRAF3IP1-203ENST00000409739 NDUFC2O95298 119 aa18.6■□□□□ 0.57
TRAF3IP1-203ENST00000409739 KCNQ1DNQ9H478 68 aa18.6■□□□□ 0.57
TRAF3IP1-203ENST00000409739 SPANXB1Q9NS25 103 aaPredicted RBP18.6■□□□□ 0.57
TRAF3IP1-203ENST00000409739 SNRPEP62304 92 aaKnown RBP18.58■□□□□ 0.56
TRAF3IP1-203ENST00000409739 SPRR1AP35321 89 aa18.56■□□□□ 0.56
TRAF3IP1-203ENST00000409739 DDTP30046 118 aa18.54■□□□□ 0.56
TRAF3IP1-203ENST00000409739 RPL13AP40429 203 aaKnown RBP18.54■□□□□ 0.56
TRAF3IP1-203ENST00000409739 LINC00308Q8TCZ7 52 aa18.54■□□□□ 0.56
TRAF3IP1-203ENST00000409739 LINC00337Q8N6G1 96 aa18.52■□□□□ 0.56
TRAF3IP1-203ENST00000409739 HMCN2Q8NDA2 5059 aa18.51■□□□□ 0.55
TRAF3IP1-203ENST00000409739 C5orf52A6NGY3 159 aa18.51■□□□□ 0.55
TRAF3IP1-203ENST00000409739 KRTAP4-16G5E9R7 235 aaPredicted RBP18.51■□□□□ 0.55
TRAF3IP1-203ENST00000409739 PCP2Q8IVA1 136 aa18.51■□□□□ 0.55
TRAF3IP1-203ENST00000409739 A0A087X002 238 aa18.5■□□□□ 0.55
TRAF3IP1-203ENST00000409739 SCGB1D4Q6XE38 83 aa18.5■□□□□ 0.55
TRAF3IP1-203ENST00000409739 HIGD2AQ9BW72 106 aa18.5■□□□□ 0.55
TRAF3IP1-203ENST00000409739 S100A12P80511 92 aa18.49■□□□□ 0.55
TRAF3IP1-203ENST00000409739 IGLV6-57P01721 117 aa18.48■□□□□ 0.55
TRAF3IP1-203ENST00000409739 S100A7L2Q5SY68 101 aa18.48■□□□□ 0.55
TRAF3IP1-203ENST00000409739 SPANXCQ9NY87 97 aa18.48■□□□□ 0.55
TRAF3IP1-203ENST00000409739 ANAPC11Q9NYG5 84 aa18.48■□□□□ 0.55
TRAF3IP1-203ENST00000409739 ETDCA0A1B0GVM5 59 aa18.47■□□□□ 0.55
TRAF3IP1-203ENST00000409739 SPANXDQ9BXN6 97 aa18.46■□□□□ 0.55
TRAF3IP1-203ENST00000409739 CRYGAP11844 174 aa18.44■□□□□ 0.54
TRAF3IP1-203ENST00000409739 HSBP1L1C9JCN9 74 aa18.41■□□□□ 0.54
TRAF3IP1-203ENST00000409739 FAM229BQ4G0N7 80 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms