RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 LINC00308Q8TCZ7 52 aa10.2□□□□□ -0.78
SHANK2-204ENST00000409530 TRBV30A0A0K0K1B3 111 aa10.19□□□□□ -0.78
SHANK2-204ENST00000409530 LCE6AA0A183 80 aa10.19□□□□□ -0.78
SHANK2-204ENST00000409530 A0A087WTM6 91 aa10.19□□□□□ -0.78
SHANK2-204ENST00000409530 A4D1N5 150 aa10.19□□□□□ -0.78
SHANK2-204ENST00000409530 TNP2Q05952 138 aa10.18□□□□□ -0.78
SHANK2-204ENST00000409530 C14orf177Q52M58 125 aa10.18□□□□□ -0.78
SHANK2-204ENST00000409530 Q8N814 137 aa10.18□□□□□ -0.78
SHANK2-204ENST00000409530 SND1-IT1Q9HBX3 110 aa10.18□□□□□ -0.78
SHANK2-204ENST00000409530 RTL8CO15255 209 aa10.16□□□□□ -0.78
SHANK2-204ENST00000409530 RPL24P83731 157 aaKnown RBP10.16□□□□□ -0.78
SHANK2-204ENST00000409530 Q6ZRP5 223 aa10.16□□□□□ -0.78
SHANK2-204ENST00000409530 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.16□□□□□ -0.78
SHANK2-204ENST00000409530 COX17Q14061 63 aa10.16□□□□□ -0.78
SHANK2-204ENST00000409530 GAGE2BQ13066 116 aa10.15□□□□□ -0.78
SHANK2-204ENST00000409530 DNAH17Q9UFH2 4485 aa10.15□□□□□ -0.78
SHANK2-204ENST00000409530 NDUFC2-KCTD14E9PQ53 114 aa10.15□□□□□ -0.79
SHANK2-204ENST00000409530 IGKV2-24A0A0C4DH68 120 aa10.14□□□□□ -0.79
SHANK2-204ENST00000409530 A0A1B0GWB2 263 aa10.14□□□□□ -0.79
SHANK2-204ENST00000409530 F8W1H4 67 aa10.14□□□□□ -0.79
SHANK2-204ENST00000409530 H7C2G1 150 aa10.13□□□□□ -0.79
SHANK2-204ENST00000409530 IFITM1P13164 125 aa10.13□□□□□ -0.79
SHANK2-204ENST00000409530 PRR3P79522 188 aaKnown RBP10.13□□□□□ -0.79
SHANK2-204ENST00000409530 NCR3O14931 201 aa10.12□□□□□ -0.79
SHANK2-204ENST00000409530 Q8NDZ9 215 aa10.12□□□□□ -0.79
SHANK2-204ENST00000409530 RYR2Q92736 4967 aa10.12□□□□□ -0.79
SHANK2-204ENST00000409530 F8WDY8 70 aa10.12□□□□□ -0.79
SHANK2-204ENST00000409530 CNBPP62633 177 aaKnown RBP10.12□□□□□ -0.79
SHANK2-204ENST00000409530 HECTD4Q9Y4D8 3996 aa10.11□□□□□ -0.79
SHANK2-204ENST00000409530 CFC1BP0CG36 223 aa10.11□□□□□ -0.79
SHANK2-204ENST00000409530 CFC1P0CG37 223 aa10.11□□□□□ -0.79
SHANK2-204ENST00000409530 CHTF8P0CG12 524 aa10.1□□□□□ -0.79
SHANK2-204ENST00000409530 COPS9Q8WXC6 57 aa10.1□□□□□ -0.79
SHANK2-204ENST00000409530 LOC107984640A0A0U1RRK4 108 aa10.09□□□□□ -0.79
SHANK2-204ENST00000409530 C9orf129Q5T035 196 aaKnown RBP10.09□□□□□ -0.79
SHANK2-204ENST00000409530 A0A096LNI7 61 aa10.09□□□□□ -0.79
SHANK2-204ENST00000409530 FAM168BA1KXE4 195 aa10.09□□□□□ -0.79
SHANK2-204ENST00000409530 H3BMG7 143 aa10.09□□□□□ -0.79
SHANK2-204ENST00000409530 FAT2Q9NYQ8 4349 aa10.08□□□□□ -0.8
SHANK2-204ENST00000409530 IGLV5-52A0A0A0MRZ9 124 aa10.08□□□□□ -0.8
SHANK2-204ENST00000409530 Q1RN00 199 aa10.07□□□□□ -0.8
SHANK2-204ENST00000409530 OR13C6PQ8NH95 151 aa10.07□□□□□ -0.8
SHANK2-204ENST00000409530 IGKV2-28A0A075B6P5 120 aa10.06□□□□□ -0.8
SHANK2-204ENST00000409530 J3QR89 54 aa10.06□□□□□ -0.8
SHANK2-204ENST00000409530 IGKV2D-28P01615 120 aa10.06□□□□□ -0.8
SHANK2-204ENST00000409530 RPL13AP40429 203 aaKnown RBP10.06□□□□□ -0.8
SHANK2-204ENST00000409530 KRTAP10-2P60368 255 aa10.06□□□□□ -0.8
SHANK2-204ENST00000409530 FAM19A5Q7Z5A7 132 aaPredicted RBP10.06□□□□□ -0.8
SHANK2-204ENST00000409530 PGPEP1Q9NXJ5 209 aa10.06□□□□□ -0.8
SHANK2-204ENST00000409530 LINC00337Q8N6G1 96 aa10.06□□□□□ -0.8
SHANK2-204ENST00000409530 C9orf163Q8N9P6 203 aa10.06□□□□□ -0.8
SHANK2-204ENST00000409530 SERTAD4-AS1Q5TG53 156 aa10.05□□□□□ -0.8
SHANK2-204ENST00000409530 PRO0461Q9UI25 63 aa10.05□□□□□ -0.8
SHANK2-204ENST00000409530 TLX1NBP0CAT3 122 aa10.04□□□□□ -0.8
SHANK2-204ENST00000409530 PRO1854Q9UHT4 67 aa10.04□□□□□ -0.8
SHANK2-204ENST00000409530 DNAH11Q96DT5 4516 aa10.04□□□□□ -0.8
SHANK2-204ENST00000409530 A0A0B4J2C4 111 aa10.03□□□□□ -0.8
SHANK2-204ENST00000409530 ETDBQ3ZM63 59 aa10.03□□□□□ -0.8
SHANK2-204ENST00000409530 PANO1I0J062 215 aa10.02□□□□□ -0.81
SHANK2-204ENST00000409530 TSPAN13O95857 204 aa10.02□□□□□ -0.81
SHANK2-204ENST00000409530 DPH3Q96FX2 82 aa10.02□□□□□ -0.81
SHANK2-204ENST00000409530 SIGMAR1Q99720 223 aa10.01□□□□□ -0.81
SHANK2-204ENST00000409530 RYR3Q15413 4870 aa10.01□□□□□ -0.81
SHANK2-204ENST00000409530 PKD1P98161 4303 aa10.01□□□□□ -0.81
SHANK2-204ENST00000409530 C16orf90A8MZG2 172 aa10.01□□□□□ -0.81
SHANK2-204ENST00000409530 S100A7L2Q5SY68 101 aa10.01□□□□□ -0.81
SHANK2-204ENST00000409530 NKAPP1Q8N9T2 125 aa10.01□□□□□ -0.81
SHANK2-204ENST00000409530 LOC107984156A0A0G2JMH3 177 aa10□□□□□ -0.81
SHANK2-204ENST00000409530 SCGB1A1P11684 91 aa10□□□□□ -0.81
SHANK2-204ENST00000409530 VPREB1P12018 145 aa10□□□□□ -0.81
SHANK2-204ENST00000409530 ARL17AQ8IVW1 177 aa10□□□□□ -0.81
SHANK2-204ENST00000409530 DNAH5Q8TE73 4624 aa10□□□□□ -0.81
SHANK2-204ENST00000409530 SDIM1Q6ZPB5 146 aa10□□□□□ -0.81
SHANK2-204ENST00000409530 PSMB2P49721 201 aa9.99□□□□□ -0.81
SHANK2-204ENST00000409530 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.99□□□□□ -0.81
SHANK2-204ENST00000409530 NDUFC2O95298 119 aa9.98□□□□□ -0.81
SHANK2-204ENST00000409530 TRAV13-2A0A0B4J235 113 aa9.98□□□□□ -0.81
SHANK2-204ENST00000409530 A0A1B0GV72 72 aa9.98□□□□□ -0.81
SHANK2-204ENST00000409530 LYRM7Q5U5X0 104 aa9.97□□□□□ -0.81
SHANK2-204ENST00000409530 KRTAP7-1Q8IUC3 87 aa9.97□□□□□ -0.81
SHANK2-204ENST00000409530 MTURNQ8N3F0 131 aa9.97□□□□□ -0.81
SHANK2-204ENST00000409530 TRBV10-3A0A0K0K1G6 114 aa9.97□□□□□ -0.81
SHANK2-204ENST00000409530 A0A1W2PNN7 141 aa9.97□□□□□ -0.81
SHANK2-204ENST00000409530 RPL37AP8A6NKH3 93 aa9.97□□□□□ -0.81
SHANK2-204ENST00000409530 PPDPFQ9H3Y8 114 aa9.97□□□□□ -0.81
SHANK2-204ENST00000409530 M0QXV9 152 aa9.95□□□□□ -0.82
SHANK2-204ENST00000409530 HAMPP81172 84 aa9.95□□□□□ -0.82
SHANK2-204ENST00000409530 PKHD1P08F94 4074 aa9.95□□□□□ -0.82
SHANK2-204ENST00000409530 SMCPP49901 116 aaPredicted RBP9.95□□□□□ -0.82
SHANK2-204ENST00000409530 TRBV20-1A0A075B6N2 111 aa9.94□□□□□ -0.82
SHANK2-204ENST00000409530 C7orf33Q8WU49 177 aa9.94□□□□□ -0.82
SHANK2-204ENST00000409530 C22orf24Q9Y442 160 aa9.94□□□□□ -0.82
SHANK2-204ENST00000409530 TRIAP1O43715 76 aa9.94□□□□□ -0.82
SHANK2-204ENST00000409530 SMIM11BQ8TCY0 68 aa9.94□□□□□ -0.82
SHANK2-204ENST00000409530 M0R378 163 aa9.92□□□□□ -0.82
SHANK2-204ENST00000409530 SCGB1C2P0DMR2 95 aa9.92□□□□□ -0.82
SHANK2-204ENST00000409530 LINC00336Q6ZUF6 198 aa9.92□□□□□ -0.82
SHANK2-204ENST00000409530 SPACA4Q8TDM5 124 aa9.92□□□□□ -0.82
SHANK2-204ENST00000409530 TMEM126AQ9H061 195 aa9.92□□□□□ -0.82
SHANK2-204ENST00000409530 PKIGQ9Y2B9 76 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms