RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 SMG6Q86US8 1419 aaKnown RBP-1.73□□□□□ -2.69
MIR548I3-201ENST00000408378 NCOA3Q9Y6Q9 1424 aa-1.73□□□□□ -2.69
MIR548I3-201ENST00000408378 K7EP34 96 aa-1.73□□□□□ -2.69
MIR548I3-201ENST00000408378 DEFB1P60022 68 aa-1.73□□□□□ -2.69
MIR548I3-201ENST00000408378 TSTD1Q8NFU3 115 aa-1.73□□□□□ -2.69
MIR548I3-201ENST00000408378 RERGLQ9H628 205 aa-1.73□□□□□ -2.69
MIR548I3-201ENST00000408378 PRUNE2Q8WUY3 3088 aa-1.73□□□□□ -2.69
MIR548I3-201ENST00000408378 FHAD1B1AJZ9 1412 aa-1.74□□□□□ -2.69
MIR548I3-201ENST00000408378 CLIP1P30622 1438 aa-1.74□□□□□ -2.69
MIR548I3-201ENST00000408378 SNCAP37840 140 aa-1.74□□□□□ -2.69
MIR548I3-201ENST00000408378 COMMD6Q7Z4G1 85 aa-1.74□□□□□ -2.69
MIR548I3-201ENST00000408378 C5orf38Q86SI9 138 aa-1.74□□□□□ -2.69
MIR548I3-201ENST00000408378 ARL11Q969Q4 196 aa-1.74□□□□□ -2.69
MIR548I3-201ENST00000408378 PDCD11Q14690 1871 aaKnown RBP-1.74□□□□□ -2.69
MIR548I3-201ENST00000408378 ZFHX4Q86UP3 3567 aa-1.74□□□□□ -2.69
MIR548I3-201ENST00000408378 CPSF1Q10570 1443 aaKnown RBP-1.74□□□□□ -2.69
MIR548I3-201ENST00000408378 ADGRL2O95490 1459 aa-1.75□□□□□ -2.69
MIR548I3-201ENST00000408378 CFTRP13569 1480 aa-1.75□□□□□ -2.69
MIR548I3-201ENST00000408378 NLRP1Q9C000 1473 aa-1.75□□□□□ -2.69
MIR548I3-201ENST00000408378 SPTAN1Q13813 2472 aaKnown RBP-1.75□□□□□ -2.69
MIR548I3-201ENST00000408378 TCHHQ07283 1943 aa-1.75□□□□□ -2.69
MIR548I3-201ENST00000408378 FAM223BA6NKX1 122 aa-1.76□□□□□ -2.69
MIR548I3-201ENST00000408378 SAA2P0DJI9 122 aaPredicted RBP-1.76□□□□□ -2.69
MIR548I3-201ENST00000408378 KRTAP19-5Q3LI72 72 aa-1.76□□□□□ -2.69
MIR548I3-201ENST00000408378 C6orf201Q7Z4U5 140 aa-1.76□□□□□ -2.69
MIR548I3-201ENST00000408378 SNRNP25Q9BV90 132 aaKnown RBP-1.76□□□□□ -2.69
MIR548I3-201ENST00000408378 S4R3F8 94 aa-1.76□□□□□ -2.69
MIR548I3-201ENST00000408378 FREM2Q5SZK8 3169 aa-1.76□□□□□ -2.69
MIR548I3-201ENST00000408378 ANKRD36A6QL64 1941 aa-1.77□□□□□ -2.69
MIR548I3-201ENST00000408378 SFTA2Q6UW10 78 aa-1.77□□□□□ -2.69
MIR548I3-201ENST00000408378 C8orf59Q8N0T1 100 aaPredicted RBP-1.77□□□□□ -2.69
MIR548I3-201ENST00000408378 EDC4Q6P2E9 1401 aaKnown RBP-1.77□□□□□ -2.69
MIR548I3-201ENST00000408378 EHBP1L1Q8N3D4 1523 aa-1.77□□□□□ -2.69
MIR548I3-201ENST00000408378 SPTY2D1-AS1A0A0U1RR47 76 aa-1.78□□□□□ -2.69
MIR548I3-201ENST00000408378 MT1BP07438 61 aa-1.78□□□□□ -2.69
MIR548I3-201ENST00000408378 Q56UQ5 140 aa-1.78□□□□□ -2.69
MIR548I3-201ENST00000408378 CSMD2Q7Z408 3487 aa-1.78□□□□□ -2.69
MIR548I3-201ENST00000408378 LRRC37AA6NMS7 1700 aa-1.79□□□□□ -2.7
MIR548I3-201ENST00000408378 A0A0G2JND7 137 aa-1.79□□□□□ -2.7
MIR548I3-201ENST00000408378 TRAPPC2P0DI81 140 aa-1.79□□□□□ -2.7
MIR548I3-201ENST00000408378 TRAPPC2BP0DI82 140 aa-1.79□□□□□ -2.7
MIR548I3-201ENST00000408378 FGF7P21781 194 aa-1.79□□□□□ -2.7
MIR548I3-201ENST00000408378 DEFB110Q30KQ9 67 aa-1.79□□□□□ -2.7
MIR548I3-201ENST00000408378 SELENOSQ9BQE4 189 aa-1.79□□□□□ -2.7
MIR548I3-201ENST00000408378 KIAA1551Q9HCM1 1747 aa-1.8□□□□□ -2.7
MIR548I3-201ENST00000408378 MAP3K1Q13233 1512 aa-1.8□□□□□ -2.7
MIR548I3-201ENST00000408378 A0A087WVE0 104 aa-1.8□□□□□ -2.7
MIR548I3-201ENST00000408378 F6UZH7 168 aa-1.8□□□□□ -2.7
MIR548I3-201ENST00000408378 COX6CP09669 75 aa-1.8□□□□□ -2.7
MIR548I3-201ENST00000408378 ARMS2P0C7Q2 107 aa-1.8□□□□□ -2.7
MIR548I3-201ENST00000408378 CATR1Q13166 79 aa-1.8□□□□□ -2.7
MIR548I3-201ENST00000408378 MEIG1Q5JSS6 88 aa-1.8□□□□□ -2.7
MIR548I3-201ENST00000408378 MANBALQ9NQG1 85 aa-1.8□□□□□ -2.7
MIR548I3-201ENST00000408378 GRIN2AQ12879 1464 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 TRBV7-7A0A0K0K1E9 115 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 MIF4GDA9UHW6 222 aaKnown RBP-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 APOC2P02655 101 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 MT1EP04732 61 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 ARPC4P59998 168 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 GNG11P61952 73 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 DR1Q01658 176 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 Q0VG73 95 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 NMSQ5H8A3 153 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 MT1MQ8N339 61 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 LZICQ8WZA0 190 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 C12orf57Q99622 126 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 NUP188Q5SRE5 1749 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 SCN7AQ01118 1682 aa-1.81□□□□□ -2.7
MIR548I3-201ENST00000408378 H3BQF6 201 aa-1.82□□□□□ -2.7
MIR548I3-201ENST00000408378 PP6455Q8WZ26 134 aa-1.82□□□□□ -2.7
MIR548I3-201ENST00000408378 ANP32BQ92688 251 aaKnown RBP-1.82□□□□□ -2.7
MIR548I3-201ENST00000408378 PFDN5Q99471 154 aa-1.82□□□□□ -2.7
MIR548I3-201ENST00000408378 PRO1854Q9UHT4 67 aa-1.82□□□□□ -2.7
MIR548I3-201ENST00000408378 MRC2Q9UBG0 1479 aa-1.82□□□□□ -2.7
MIR548I3-201ENST00000408378 C7orf77A4D0Y5 90 aa-1.83□□□□□ -2.7
MIR548I3-201ENST00000408378 H0Y9P7 68 aa-1.83□□□□□ -2.7
MIR548I3-201ENST00000408378 H7BZZ5 65 aa-1.83□□□□□ -2.7
MIR548I3-201ENST00000408378 GNGT1P63211 74 aa-1.83□□□□□ -2.7
MIR548I3-201ENST00000408378 SMIM21Q3B7S5 101 aa-1.83□□□□□ -2.7
MIR548I3-201ENST00000408378 DEFB107AQ8IZN7 70 aa-1.83□□□□□ -2.7
MIR548I3-201ENST00000408378 PSENENQ9NZ42 101 aa-1.83□□□□□ -2.7
MIR548I3-201ENST00000408378 BCORQ6W2J9 1755 aa-1.83□□□□□ -2.7
MIR548I3-201ENST00000408378 MBD5Q9P267 1494 aa-1.83□□□□□ -2.7
MIR548I3-201ENST00000408378 SHROOM2Q13796 1616 aa-1.84□□□□□ -2.7
MIR548I3-201ENST00000408378 UBE2L5PA0A1B0GUS4 154 aa-1.84□□□□□ -2.7
MIR548I3-201ENST00000408378 OOSP1A8MZH6 123 aa-1.84□□□□□ -2.7
MIR548I3-201ENST00000408378 NDUFA3O95167 84 aa-1.84□□□□□ -2.7
MIR548I3-201ENST00000408378 MT2AP02795 61 aa-1.84□□□□□ -2.7
MIR548I3-201ENST00000408378 UBE2L3P68036 154 aaKnown RBP-1.84□□□□□ -2.7
MIR548I3-201ENST00000408378 HSD52Q0P140 79 aa-1.84□□□□□ -2.7
MIR548I3-201ENST00000408378 MT1LQ93083 61 aa-1.84□□□□□ -2.7
MIR548I3-201ENST00000408378 DPH3P1Q9H4G8 78 aa-1.84□□□□□ -2.7
MIR548I3-201ENST00000408378 ROBO1Q9Y6N7 1651 aa-1.85□□□□□ -2.71
MIR548I3-201ENST00000408378 COX6B2Q6YFQ2 88 aa-1.85□□□□□ -2.71
MIR548I3-201ENST00000408378 PYDC1Q8WXC3 89 aa-1.85□□□□□ -2.71
MIR548I3-201ENST00000408378 DIP2CQ9Y2E4 1556 aa-1.85□□□□□ -2.71
MIR548I3-201ENST00000408378 PHLPP1O60346 1717 aa-1.86□□□□□ -2.71
MIR548I3-201ENST00000408378 KNDC1Q76NI1 1749 aa-1.86□□□□□ -2.71
MIR548I3-201ENST00000408378 A2ML1A8K2U0 1454 aa-1.86□□□□□ -2.71
MIR548I3-201ENST00000408378 RGPD2P0DJD1 1756 aa-1.86□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms