RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 BRI3O95415 125 aa9.72□□□□□ -0.85
RERE-204ENST00000400908 LINC00313P59037 77 aa9.72□□□□□ -0.85
RERE-204ENST00000400908 CD164Q04900 197 aa9.72□□□□□ -0.85
RERE-204ENST00000400908 APLNQ9ULZ1 77 aa9.72□□□□□ -0.85
RERE-204ENST00000400908 LYPD5Q6UWN5 251 aa9.71□□□□□ -0.86
RERE-204ENST00000400908 ANKRD11Q6UB99 2663 aaPredicted RBP9.7□□□□□ -0.86
RERE-204ENST00000400908 KRTAP10-9P60411 292 aa9.7□□□□□ -0.86
RERE-204ENST00000400908 LOC101927531A0A1B0GV80 90 aa9.7□□□□□ -0.86
RERE-204ENST00000400908 A8MUN3 132 aa9.7□□□□□ -0.86
RERE-204ENST00000400908 HIVEP3Q5T1R4 2406 aa9.69□□□□□ -0.86
RERE-204ENST00000400908 DOPEY1Q5JWR5 2465 aa9.67□□□□□ -0.86
RERE-204ENST00000400908 MUC4Q99102 2169 aa9.67□□□□□ -0.86
RERE-204ENST00000400908 TM2D3Q9BRN9 247 aa9.67□□□□□ -0.86
RERE-204ENST00000400908 IGLV1-51P01701 117 aa9.67□□□□□ -0.86
RERE-204ENST00000400908 COA5Q86WW8 74 aa9.67□□□□□ -0.86
RERE-204ENST00000400908 HTTP42858 3142 aa9.66□□□□□ -0.86
RERE-204ENST00000400908 A0A096LNJ9 63 aa9.66□□□□□ -0.86
RERE-204ENST00000400908 EDN2P20800 178 aa9.66□□□□□ -0.86
RERE-204ENST00000400908 MIR22HGQ0VDD5 57 aa9.66□□□□□ -0.86
RERE-204ENST00000400908 LINC01554Q52M75 96 aa9.66□□□□□ -0.86
RERE-204ENST00000400908 Q8NBF4 154 aa9.65□□□□□ -0.86
RERE-204ENST00000400908 Q6ZSN1 163 aa9.65□□□□□ -0.86
RERE-204ENST00000400908 LINC00167Q96N53 147 aa9.65□□□□□ -0.87
RERE-204ENST00000400908 CHD7Q9P2D1 2997 aa9.64□□□□□ -0.87
RERE-204ENST00000400908 Q6ZQT0 140 aa9.64□□□□□ -0.87
RERE-204ENST00000400908 LCA10Q71F78 164 aa9.64□□□□□ -0.87
RERE-204ENST00000400908 LOC110117498A0A087WWA1 95 aa9.63□□□□□ -0.87
RERE-204ENST00000400908 SONP18583 2426 aaKnown RBP9.63□□□□□ -0.87
RERE-204ENST00000400908 EPM2AB3EWF7 344 aa9.63□□□□□ -0.87
RERE-204ENST00000400908 LINC00476Q8WZB0 136 aa9.63□□□□□ -0.87
RERE-204ENST00000400908 LUZP6Q538Z0 58 aa9.62□□□□□ -0.87
RERE-204ENST00000400908 C5orf42Q9H799 3197 aa9.62□□□□□ -0.87
RERE-204ENST00000400908 PCSK5Q92824 1860 aa9.62□□□□□ -0.87
RERE-204ENST00000400908 IGLV5-39A0A0G2JS06 123 aa9.62□□□□□ -0.87
RERE-204ENST00000400908 ELOF1P60002 83 aaKnown RBP9.61□□□□□ -0.87
RERE-204ENST00000400908 COX8CQ7Z4L0 72 aa9.61□□□□□ -0.87
RERE-204ENST00000400908 FAM229AH3BQW9 127 aa9.61□□□□□ -0.87
RERE-204ENST00000400908 Q96NJ1 140 aa9.61□□□□□ -0.87
RERE-204ENST00000400908 KTN1-AS1Q86SY8 53 aa9.6□□□□□ -0.87
RERE-204ENST00000400908 SMCPP49901 116 aaPredicted RBP9.59□□□□□ -0.87
RERE-204ENST00000400908 RPL37AP61513 92 aaKnown RBP9.59□□□□□ -0.87
RERE-204ENST00000400908 FAM19A4Q96LR4 140 aa9.59□□□□□ -0.87
RERE-204ENST00000400908 SPTBN4Q9H254 2564 aa9.59□□□□□ -0.87
RERE-204ENST00000400908 C9orf129Q5T035 196 aaKnown RBP9.59□□□□□ -0.87
RERE-204ENST00000400908 SMR3AQ99954 134 aa9.58□□□□□ -0.88
RERE-204ENST00000400908 KIF25-AS1Q9Y6Z4 181 aa9.57□□□□□ -0.88
RERE-204ENST00000400908 TYMSOSQ8TAI1 123 aa9.57□□□□□ -0.88
RERE-204ENST00000400908 ERC2-IT1O76042 136 aa9.57□□□□□ -0.88
RERE-204ENST00000400908 FAM218AQ96MZ4 157 aa9.57□□□□□ -0.88
RERE-204ENST00000400908 CHD8Q9HCK8 2581 aa9.57□□□□□ -0.88
RERE-204ENST00000400908 ABCA2Q9BZC7 2435 aa9.56□□□□□ -0.88
RERE-204ENST00000400908 Q6ZRX8 168 aa9.55□□□□□ -0.88
RERE-204ENST00000400908 TRBV7-4A0A0J9YYF1 115 aa9.55□□□□□ -0.88
RERE-204ENST00000400908 MRPL34Q9BQ48 92 aaKnown RBP9.54□□□□□ -0.88
RERE-204ENST00000400908 PTPRBP23467 1997 aa9.54□□□□□ -0.88
RERE-204ENST00000400908 CDC42SE1Q9NRR8 79 aa9.54□□□□□ -0.88
RERE-204ENST00000400908 MYO9AB2RTY4 2548 aa9.54□□□□□ -0.88
RERE-204ENST00000400908 IGHV3OR16-9A0A0B4J2B5 98 aa9.54□□□□□ -0.88
RERE-204ENST00000400908 A8MWP4 228 aa9.54□□□□□ -0.88
RERE-204ENST00000400908 C2CD3Q4AC94 2353 aa9.53□□□□□ -0.88
RERE-204ENST00000400908 TET2Q6N021 2002 aaPredicted RBP9.52□□□□□ -0.88
RERE-204ENST00000400908 NHLRC4P0CG21 123 aaPredicted RBP9.52□□□□□ -0.89
RERE-204ENST00000400908 PRO0461Q9UI25 63 aa9.52□□□□□ -0.89
RERE-204ENST00000400908 COX6B2Q6YFQ2 88 aa9.51□□□□□ -0.89
RERE-204ENST00000400908 CHD9Q3L8U1 2897 aa9.5□□□□□ -0.89
RERE-204ENST00000400908 PHF5AQ7RTV0 110 aaKnown RBP9.5□□□□□ -0.89
RERE-204ENST00000400908 Q6ZRP5 223 aa9.49□□□□□ -0.89
RERE-204ENST00000400908 MYO18BQ8IUG5 2567 aa9.49□□□□□ -0.89
RERE-204ENST00000400908 ST20-AS1Q8NBB2 130 aa9.49□□□□□ -0.89
RERE-204ENST00000400908 C16orf95Q9H693 158 aa9.49□□□□□ -0.89
RERE-204ENST00000400908 BPTFQ12830 3046 aa9.49□□□□□ -0.89
RERE-204ENST00000400908 LINC01546A6NGU7 62 aa9.47□□□□□ -0.89
RERE-204ENST00000400908 K7EQZ3 153 aa9.47□□□□□ -0.89
RERE-204ENST00000400908 MKI67P46013 3256 aaKnown RBP9.46□□□□□ -0.89
RERE-204ENST00000400908 IGLV6-57P01721 117 aa9.46□□□□□ -0.89
RERE-204ENST00000400908 LINC00336Q6ZUF6 198 aa9.46□□□□□ -0.89
RERE-204ENST00000400908 AGRNO00468 2067 aa9.46□□□□□ -0.9
RERE-204ENST00000400908 USP9XQ93008 2570 aaPredicted RBP9.45□□□□□ -0.9
RERE-204ENST00000400908 FHL3Q13643 280 aa9.45□□□□□ -0.9
RERE-204ENST00000400908 TLN2Q9Y4G6 2542 aa9.45□□□□□ -0.9
RERE-204ENST00000400908 RANBP2P49792 3224 aaKnown RBP9.45□□□□□ -0.9
RERE-204ENST00000400908 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
RERE-204ENST00000400908 IGLV5-45A0A087WSX0 123 aa9.44□□□□□ -0.9
RERE-204ENST00000400908 USP9YO00507 2555 aaPredicted RBP9.42□□□□□ -0.9
RERE-204ENST00000400908 C16orf90A8MZG2 172 aa9.41□□□□□ -0.9
RERE-204ENST00000400908 RTL8CO15255 209 aa9.41□□□□□ -0.9
RERE-204ENST00000400908 ZNF462Q96JM2 2506 aa9.41□□□□□ -0.9
RERE-204ENST00000400908 ABCA12Q86UK0 2595 aa9.41□□□□□ -0.9
RERE-204ENST00000400908 BRCA2P51587 3418 aa9.4□□□□□ -0.9
RERE-204ENST00000400908 PRRC2CQ9Y520 2896 aaKnown RBP9.4□□□□□ -0.9
RERE-204ENST00000400908 COL27A1Q8IZC6 1860 aaPredicted RBP9.39□□□□□ -0.91
RERE-204ENST00000400908 CSNK1G2-AS1Q8NCQ2 148 aa9.38□□□□□ -0.91
RERE-204ENST00000400908 A0A0D9SG42 100 aa9.38□□□□□ -0.91
RERE-204ENST00000400908 KLKP1Q107X0 134 aa9.38□□□□□ -0.91
RERE-204ENST00000400908 C8orf17Q9NRJ1 99 aa9.37□□□□□ -0.91
RERE-204ENST00000400908 DSCR10P59022 87 aa9.37□□□□□ -0.91
RERE-204ENST00000400908 PRR15Q8IV56 129 aa9.37□□□□□ -0.91
RERE-204ENST00000400908 LAMA3Q16787 3333 aa9.37□□□□□ -0.91
RERE-204ENST00000400908 LINC00315P59091 139 aa9.35□□□□□ -0.91
RERE-204ENST00000400908 H3BNG1 76 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms