RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PHF5AQ7RTV0 110 aaKnown RBP11□□□□□ -0.65
CTNS-203ENST00000399306 SMIM13P0DJ93 91 aa10.99□□□□□ -0.65
CTNS-203ENST00000399306 RPL24P83731 157 aaKnown RBP10.99□□□□□ -0.65
CTNS-203ENST00000399306 SERTAD4-AS1Q5TG53 156 aa10.99□□□□□ -0.65
CTNS-203ENST00000399306 C22orf24Q9Y442 160 aa10.99□□□□□ -0.65
CTNS-203ENST00000399306 LOC107984156A0A0G2JMH3 177 aa10.98□□□□□ -0.65
CTNS-203ENST00000399306 PRR3P79522 188 aaKnown RBP10.98□□□□□ -0.65
CTNS-203ENST00000399306 ARL17AQ8IVW1 177 aa10.98□□□□□ -0.65
CTNS-203ENST00000399306 PCLOQ9Y6V0 5065 aa10.97□□□□□ -0.65
CTNS-203ENST00000399306 PKHD1L1Q86WI1 4243 aa10.97□□□□□ -0.65
CTNS-203ENST00000399306 IGKV2D-26A0A0A0MRZ7 120 aa10.96□□□□□ -0.65
CTNS-203ENST00000399306 TIMM17BO60830 172 aa10.96□□□□□ -0.65
CTNS-203ENST00000399306 INAFM2P0DMQ5 153 aa10.96□□□□□ -0.65
CTNS-203ENST00000399306 MRPL55Q7Z7F7 128 aaKnown RBP10.96□□□□□ -0.65
CTNS-203ENST00000399306 MIR7-3HGQ8N6C7 128 aa10.96□□□□□ -0.65
CTNS-203ENST00000399306 A0A0J9YXY3 114 aa10.95□□□□□ -0.66
CTNS-203ENST00000399306 VPREB1P12018 145 aa10.95□□□□□ -0.66
CTNS-203ENST00000399306 ATOH7Q8N100 152 aa10.95□□□□□ -0.66
CTNS-203ENST00000399306 NKAPP1Q8N9T2 125 aa10.95□□□□□ -0.66
CTNS-203ENST00000399306 ZNF815PA8K554 130 aa10.94□□□□□ -0.66
CTNS-203ENST00000399306 ANKRD39Q53RE8 183 aa10.94□□□□□ -0.66
CTNS-203ENST00000399306 PSORS1C2Q9UIG4 136 aa10.94□□□□□ -0.66
CTNS-203ENST00000399306 A0A0U1RRA0 63 aa10.93□□□□□ -0.66
CTNS-203ENST00000399306 HSBP1L1C9JCN9 74 aa10.93□□□□□ -0.66
CTNS-203ENST00000399306 UBE2BP63146 152 aa10.93□□□□□ -0.66
CTNS-203ENST00000399306 SCGB1D1O95968 90 aa10.91□□□□□ -0.66
CTNS-203ENST00000399306 LINC00167Q96N53 147 aa10.91□□□□□ -0.66
CTNS-203ENST00000399306 FLG2Q5D862 2391 aaPredicted RBP10.89□□□□□ -0.67
CTNS-203ENST00000399306 LITAFQ99732 161 aa10.89□□□□□ -0.67
CTNS-203ENST00000399306 M0R378 163 aa10.88□□□□□ -0.67
CTNS-203ENST00000399306 NDUFC2O95298 119 aa10.88□□□□□ -0.67
CTNS-203ENST00000399306 JOSD1Q15040 202 aaPredicted RBP10.88□□□□□ -0.67
CTNS-203ENST00000399306 KRTAP11-1Q8IUC1 163 aa10.88□□□□□ -0.67
CTNS-203ENST00000399306 BOD1L2Q8IYS8 172 aa10.88□□□□□ -0.67
CTNS-203ENST00000399306 MIEN1Q9BRT3 115 aa10.88□□□□□ -0.67
CTNS-203ENST00000399306 TTTY13Q9BZ97 58 aa10.88□□□□□ -0.67
CTNS-203ENST00000399306 PPDPFQ9H3Y8 114 aa10.88□□□□□ -0.67
CTNS-203ENST00000399306 SRSF9Q13242 221 aaKnown RBP eCLIP10.87□□□□□ -0.67
CTNS-203ENST00000399306 C1orf137Q5JT78 98 aa10.87□□□□□ -0.67
CTNS-203ENST00000399306 ADAMTSL4-AS1Q5T5F5 129 aa10.87□□□□□ -0.67
CTNS-203ENST00000399306 SPINK6Q6UWN8 80 aa10.87□□□□□ -0.67
CTNS-203ENST00000399306 Q6ZVH6 145 aa10.87□□□□□ -0.67
CTNS-203ENST00000399306 Q8NDZ9 215 aa10.87□□□□□ -0.67
CTNS-203ENST00000399306 IGLV1-50A0A075B6I6 118 aa10.86□□□□□ -0.67
CTNS-203ENST00000399306 TRBV10-2A0A0K0K1G8 114 aa10.86□□□□□ -0.67
CTNS-203ENST00000399306 TMEM238C9JI98 176 aa10.86□□□□□ -0.67
CTNS-203ENST00000399306 DAND5Q8N907 189 aa10.86□□□□□ -0.67
CTNS-203ENST00000399306 IGLV7-43P04211 117 aa10.85□□□□□ -0.67
CTNS-203ENST00000399306 HNRNPA3P51991 378 aaKnown RBP10.85□□□□□ -0.67
CTNS-203ENST00000399306 SCGB1D4Q6XE38 83 aa10.85□□□□□ -0.67
CTNS-203ENST00000399306 PCP2Q8IVA1 136 aa10.85□□□□□ -0.67
CTNS-203ENST00000399306 COPS9Q8WXC6 57 aa10.85□□□□□ -0.67
CTNS-203ENST00000399306 SPANXDQ9BXN6 97 aa10.85□□□□□ -0.67
CTNS-203ENST00000399306 SPANXCQ9NY87 97 aa10.85□□□□□ -0.67
CTNS-203ENST00000399306 TMA7Q9Y2S6 64 aaKnown RBP10.85□□□□□ -0.67
CTNS-203ENST00000399306 MYCBP2O75592 4640 aa10.85□□□□□ -0.67
CTNS-203ENST00000399306 GAGE10A6NGK3 116 aa10.83□□□□□ -0.68
CTNS-203ENST00000399306 LINC00308Q8TCZ7 52 aa10.83□□□□□ -0.68
CTNS-203ENST00000399306 SPANXB1Q9NS25 103 aaPredicted RBP10.83□□□□□ -0.68
CTNS-203ENST00000399306 RPL37AP8A6NKH3 93 aa10.82□□□□□ -0.68
CTNS-203ENST00000399306 BCE1O60756 84 aa10.82□□□□□ -0.68
CTNS-203ENST00000399306 IFITM1P13164 125 aa10.82□□□□□ -0.68
CTNS-203ENST00000399306 OXTP01178 125 aa10.81□□□□□ -0.68
CTNS-203ENST00000399306 SOSTDC1Q6X4U4 206 aa10.81□□□□□ -0.68
CTNS-203ENST00000399306 DLEU1O43261 78 aa10.8□□□□□ -0.68
CTNS-203ENST00000399306 FAT3Q8TDW7 4589 aa10.8□□□□□ -0.68
CTNS-203ENST00000399306 IGKV2-28A0A075B6P5 120 aa10.79□□□□□ -0.68
CTNS-203ENST00000399306 KRTAP29-1A8MX34 341 aaPredicted RBP10.79□□□□□ -0.68
CTNS-203ENST00000399306 IGKV2D-28P01615 120 aa10.79□□□□□ -0.68
CTNS-203ENST00000399306 COX8AP10176 69 aa10.79□□□□□ -0.68
CTNS-203ENST00000399306 DIRC1Q969H9 104 aa10.79□□□□□ -0.68
CTNS-203ENST00000399306 ZNF861PO60384 105 aa10.78□□□□□ -0.68
CTNS-203ENST00000399306 S100A12P80511 92 aa10.78□□□□□ -0.68
CTNS-203ENST00000399306 REG3GQ6UW15 175 aa10.78□□□□□ -0.68
CTNS-203ENST00000399306 KCNQ1DNQ9H478 68 aa10.78□□□□□ -0.68
CTNS-203ENST00000399306 PRYO14603 147 aa10.77□□□□□ -0.69
CTNS-203ENST00000399306 NCR3O14931 201 aa10.77□□□□□ -0.69
CTNS-203ENST00000399306 EIF4EBP3O60516 100 aaPredicted RBP10.77□□□□□ -0.69
CTNS-203ENST00000399306 RPL28P46779 137 aaKnown RBP10.77□□□□□ -0.69
CTNS-203ENST00000399306 LINC00518Q8N0U6 118 aa10.77□□□□□ -0.69
CTNS-203ENST00000399306 VAMP8Q9BV40 100 aa10.77□□□□□ -0.69
CTNS-203ENST00000399306 TMEM126AQ9H061 195 aa10.77□□□□□ -0.69
CTNS-203ENST00000399306 CBY1Q9Y3M2 126 aa10.77□□□□□ -0.69
CTNS-203ENST00000399306 LRP1Q07954 4544 aaKnown RBP10.75□□□□□ -0.69
CTNS-203ENST00000399306 H0Y9J4 135 aa10.75□□□□□ -0.69
CTNS-203ENST00000399306 IGLV6-57P01721 117 aa10.75□□□□□ -0.69
CTNS-203ENST00000399306 SPRR1AP35321 89 aa10.75□□□□□ -0.69
CTNS-203ENST00000399306 NPC2P61916 151 aa10.75□□□□□ -0.69
CTNS-203ENST00000399306 PYY3Q5JQD4 70 aa10.75□□□□□ -0.69
CTNS-203ENST00000399306 KRTAP13-1Q8IUC0 172 aa10.75□□□□□ -0.69
CTNS-203ENST00000399306 TRBV10-3A0A0K0K1G6 114 aa10.74□□□□□ -0.69
CTNS-203ENST00000399306 DDTP30046 118 aa10.74□□□□□ -0.69
CTNS-203ENST00000399306 SPATA45Q537H7 98 aa10.74□□□□□ -0.69
CTNS-203ENST00000399306 LINC00337Q8N6G1 96 aa10.73□□□□□ -0.69
CTNS-203ENST00000399306 PAM16Q9Y3D7 125 aa10.73□□□□□ -0.69
CTNS-203ENST00000399306 S100A7L2Q5SY68 101 aa10.72□□□□□ -0.69
CTNS-203ENST00000399306 UBE2AP49459 152 aa10.71□□□□□ -0.69
CTNS-203ENST00000399306 DMBT1Q9UGM3 2413 aaPredicted RBP10.71□□□□□ -0.69
CTNS-203ENST00000399306 MUSTN1Q8IVN3 82 aa10.7□□□□□ -0.7
CTNS-203ENST00000399306 LINC01600Q96MT4 127 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms