RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 Q6ZQT0 140 aa4.27□□□□□ -1.73
SMCO1-201ENST00000397537 ARHGAP5-AS1Q96IT6 56 aa4.27□□□□□ -1.73
SMCO1-201ENST00000397537 INTS1Q8N201 2190 aaKnown RBP4.27□□□□□ -1.73
SMCO1-201ENST00000397537 NACAE9PAV3 2078 aa4.27□□□□□ -1.73
SMCO1-201ENST00000397537 C11orf86A6NJI1 115 aa4.26□□□□□ -1.73
SMCO1-201ENST00000397537 ZNF815PA8K554 130 aa4.26□□□□□ -1.73
SMCO1-201ENST00000397537 DNAL4O96015 105 aa4.26□□□□□ -1.73
SMCO1-201ENST00000397537 IGLV7-43P04211 117 aa4.26□□□□□ -1.73
SMCO1-201ENST00000397537 Q6ZR54 194 aa4.26□□□□□ -1.73
SMCO1-201ENST00000397537 TMEM263Q8WUH6 116 aaKnown RBP4.26□□□□□ -1.73
SMCO1-201ENST00000397537 TMEM141Q96I45 108 aa4.26□□□□□ -1.73
SMCO1-201ENST00000397537 LINC00467Q9BRT7 94 aa4.26□□□□□ -1.73
SMCO1-201ENST00000397537 TENM1Q9UKZ4 2725 aa4.26□□□□□ -1.73
SMCO1-201ENST00000397537 E7EUB6 86 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 H7C2G1 150 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 IGHV3-30P01768 117 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 IGHV3-30-5P0DP03 117 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 SPINT3P49223 89 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 EIF4EBP1Q13541 118 aaPredicted RBP4.25□□□□□ -1.73
SMCO1-201ENST00000397537 LINC01590Q5TEZ4 76 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 Q8N6K4 173 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 NDUFA12Q9UI09 145 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 SMAD5-AS1Q9Y6J3 95 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 PCLOQ9Y6V0 5065 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 TRRAPQ9Y4A5 3859 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 C16orf90A8MZG2 172 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 SPANXN5Q5MJ07 72 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 BPESC1Q9GZL8 116 aa4.25□□□□□ -1.73
SMCO1-201ENST00000397537 A0A1B0GUT8 65 aa4.24□□□□□ -1.73
SMCO1-201ENST00000397537 F8VRH5 84 aa4.24□□□□□ -1.73
SMCO1-201ENST00000397537 FXYD4P59646 89 aa4.24□□□□□ -1.73
SMCO1-201ENST00000397537 NNATQ16517 81 aa4.24□□□□□ -1.73
SMCO1-201ENST00000397537 C1orf134Q5TEV5 83 aa4.24□□□□□ -1.73
SMCO1-201ENST00000397537 FAM167A-AS1Q96KT0 104 aa4.24□□□□□ -1.73
SMCO1-201ENST00000397537 R4GMQ9 66 aa4.24□□□□□ -1.73
SMCO1-201ENST00000397537 HYDINQ4G0P3 5121 aa4.24□□□□□ -1.73
SMCO1-201ENST00000397537 TRAV40A0A0B4J280 105 aa4.23□□□□□ -1.73
SMCO1-201ENST00000397537 Q8NAQ8 132 aa4.23□□□□□ -1.73
SMCO1-201ENST00000397537 MINOS1-NBL1R4GNA1 71 aa4.23□□□□□ -1.73
SMCO1-201ENST00000397537 RYR1P21817 5038 aa4.23□□□□□ -1.73
SMCO1-201ENST00000397537 A0A0J9YY99 117 aa4.23□□□□□ -1.73
SMCO1-201ENST00000397537 hDV103S1A0JD37 113 aa4.23□□□□□ -1.73
SMCO1-201ENST00000397537 IAPPP10997 89 aa4.23□□□□□ -1.73
SMCO1-201ENST00000397537 C14orf177Q52M58 125 aa4.23□□□□□ -1.73
SMCO1-201ENST00000397537 ST20-AS1Q8NBB2 130 aa4.23□□□□□ -1.73
SMCO1-201ENST00000397537 TFF3Q07654 80 aa4.22□□□□□ -1.73
SMCO1-201ENST00000397537 IGKV1D-42A0A075B6H8 117 aa4.21□□□□□ -1.74
SMCO1-201ENST00000397537 CRPP02741 224 aa4.21□□□□□ -1.74
SMCO1-201ENST00000397537 ZNF137PP52743 207 aa4.21□□□□□ -1.74
SMCO1-201ENST00000397537 EDDM3BP56851 147 aa4.21□□□□□ -1.74
SMCO1-201ENST00000397537 KRTAP7-1Q8IUC3 87 aa4.21□□□□□ -1.74
SMCO1-201ENST00000397537 VWFP04275 2813 aa4.21□□□□□ -1.74
SMCO1-201ENST00000397537 SEC16AO15027 2179 aa4.21□□□□□ -1.74
SMCO1-201ENST00000397537 TRAV22A0A0B4J277 110 aa4.21□□□□□ -1.74
SMCO1-201ENST00000397537 IGKV3D-7A0A0C4DH55 119 aa4.21□□□□□ -1.74
SMCO1-201ENST00000397537 SPTSSBQ8NFR3 76 aa4.21□□□□□ -1.74
SMCO1-201ENST00000397537 KLF14Q8TD94 323 aaPredicted RBP4.21□□□□□ -1.74
SMCO1-201ENST00000397537 LIMD2Q9BT23 127 aa4.21□□□□□ -1.74
SMCO1-201ENST00000397537 USF3Q68DE3 2245 aa4.2□□□□□ -1.74
SMCO1-201ENST00000397537 A0A1B0GU33 70 aa4.2□□□□□ -1.74
SMCO1-201ENST00000397537 HCG22E2RYF7 251 aa4.2□□□□□ -1.74
SMCO1-201ENST00000397537 M0R135 149 aa4.2□□□□□ -1.74
SMCO1-201ENST00000397537 HEATR1Q9H583 2144 aaKnown RBP4.2□□□□□ -1.74
SMCO1-201ENST00000397537 A0A087WVE0 104 aa4.19□□□□□ -1.74
SMCO1-201ENST00000397537 IGHV1-18A0A0C4DH31 117 aa4.19□□□□□ -1.74
SMCO1-201ENST00000397537 SDHAF1A6NFY7 115 aa4.19□□□□□ -1.74
SMCO1-201ENST00000397537 CCL22O00626 93 aa4.19□□□□□ -1.74
SMCO1-201ENST00000397537 DEFB106AQ8N104 65 aa4.19□□□□□ -1.74
SMCO1-201ENST00000397537 PATE1Q8WXA2 126 aa4.19□□□□□ -1.74
SMCO1-201ENST00000397537 CDC42SE1Q9NRR8 79 aa4.19□□□□□ -1.74
SMCO1-201ENST00000397537 DOCK10Q96BY6 2186 aa4.19□□□□□ -1.74
SMCO1-201ENST00000397537 TRAV23DV6A0A075B6W5 121 aa4.18□□□□□ -1.74
SMCO1-201ENST00000397537 D6R8Y8 96 aa4.18□□□□□ -1.74
SMCO1-201ENST00000397537 LINC00612Q8N6U2 182 aa4.18□□□□□ -1.74
SMCO1-201ENST00000397537 C9orf106Q8NAJ2 232 aa4.18□□□□□ -1.74
SMCO1-201ENST00000397537 ABCA1O95477 2261 aa4.18□□□□□ -1.74
SMCO1-201ENST00000397537 C20orf166-AS1Q96NR2 134 aa4.18□□□□□ -1.74
SMCO1-201ENST00000397537 A0A0J9YX75 114 aa4.17□□□□□ -1.74
SMCO1-201ENST00000397537 NDUFA3O95167 84 aa4.17□□□□□ -1.74
SMCO1-201ENST00000397537 C9orf116Q5BN46 136 aaPredicted RBP4.17□□□□□ -1.74
SMCO1-201ENST00000397537 MALRD1Q5VYJ5 2156 aa4.17□□□□□ -1.74
SMCO1-201ENST00000397537 TRBV7-4A0A0J9YYF1 115 aa4.16□□□□□ -1.74
SMCO1-201ENST00000397537 H3BSH0 61 aa4.16□□□□□ -1.74
SMCO1-201ENST00000397537 TMEM14BQ9NUH8 114 aa4.16□□□□□ -1.74
SMCO1-201ENST00000397537 SNURFQ9Y675 71 aa4.16□□□□□ -1.74
SMCO1-201ENST00000397537 RYR2Q92736 4967 aa4.16□□□□□ -1.74
SMCO1-201ENST00000397537 TRBV6-1A0A0K0K1D8 114 aa4.16□□□□□ -1.74
SMCO1-201ENST00000397537 CHKB-CPT1BH3BT56 60 aa4.16□□□□□ -1.74
SMCO1-201ENST00000397537 PPP1R17O96001 155 aa4.16□□□□□ -1.74
SMCO1-201ENST00000397537 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
SMCO1-201ENST00000397537 TMEM254Q8TBM7 123 aa4.16□□□□□ -1.74
SMCO1-201ENST00000397537 M0R3E3 92 aa4.15□□□□□ -1.75
SMCO1-201ENST00000397537 BAALC-AS2P0C853 105 aa4.15□□□□□ -1.75
SMCO1-201ENST00000397537 Q5VV11 94 aa4.15□□□□□ -1.75
SMCO1-201ENST00000397537 ARMS2P0C7Q2 107 aa4.14□□□□□ -1.75
SMCO1-201ENST00000397537 MUSTN1Q8IVN3 82 aa4.14□□□□□ -1.75
SMCO1-201ENST00000397537 HERC2O95714 4834 aa4.14□□□□□ -1.75
SMCO1-201ENST00000397537 IGLV4-69A0A075B6H9 119 aa4.14□□□□□ -1.75
SMCO1-201ENST00000397537 TRBV6-8A0A0A6YYG3 113 aa4.14□□□□□ -1.75
SMCO1-201ENST00000397537 KRTAP29-1A8MX34 341 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms