RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 K7ERJ3 54 aa17.71■□□□□ 0.42
CPNE1-203ENST00000397442 RPL18AQ02543 176 aaKnown RBP17.71■□□□□ 0.42
CPNE1-203ENST00000397442 LOC107984640A0A0U1RRK4 108 aa17.7■□□□□ 0.42
CPNE1-203ENST00000397442 Q8NDZ9 215 aa17.7■□□□□ 0.42
CPNE1-203ENST00000397442 KMT2CQ8NEZ4 4911 aaKnown RBP17.7■□□□□ 0.42
CPNE1-203ENST00000397442 C9orf129Q5T035 196 aaKnown RBP17.68■□□□□ 0.42
CPNE1-203ENST00000397442 FUSP35637 526 aaKnown RBP eCLIP17.67■□□□□ 0.421e-10■■□□□ 12.2
CPNE1-203ENST00000397442 LINC01620Q4KN68 170 aa17.66■□□□□ 0.42
CPNE1-203ENST00000397442 COL5A1-AS1Q5SY13 56 aa17.66■□□□□ 0.42
CPNE1-203ENST00000397442 IGKV2-28A0A075B6P5 120 aa17.65■□□□□ 0.42
CPNE1-203ENST00000397442 A0A0B4J2C4 111 aa17.65■□□□□ 0.42
CPNE1-203ENST00000397442 IGKV2D-28P01615 120 aa17.65■□□□□ 0.42
CPNE1-203ENST00000397442 GAGE2BQ13066 116 aa17.64■□□□□ 0.42
CPNE1-203ENST00000397442 RYR2Q92736 4967 aa17.64■□□□□ 0.41
CPNE1-203ENST00000397442 HECTD4Q9Y4D8 3996 aa17.64■□□□□ 0.41
CPNE1-203ENST00000397442 FAT2Q9NYQ8 4349 aa17.64■□□□□ 0.41
CPNE1-203ENST00000397442 NDUFC2O95298 119 aa17.64■□□□□ 0.41
CPNE1-203ENST00000397442 A0A096LNI7 61 aa17.62■□□□□ 0.41
CPNE1-203ENST00000397442 PRR3P79522 188 aaKnown RBP17.62■□□□□ 0.41
CPNE1-203ENST00000397442 SDIM1Q6ZPB5 146 aa17.62■□□□□ 0.41
CPNE1-203ENST00000397442 LBHQ53QV2 105 aaPredicted RBP17.61■□□□□ 0.41
CPNE1-203ENST00000397442 C16orf90A8MZG2 172 aa17.6■□□□□ 0.41
CPNE1-203ENST00000397442 TAX1BP3O14907 124 aa17.6■□□□□ 0.41
CPNE1-203ENST00000397442 LINC00337Q8N6G1 96 aa17.59■□□□□ 0.41
CPNE1-203ENST00000397442 RAB37Q96AX2 223 aa17.59■□□□□ 0.41
CPNE1-203ENST00000397442 PRO1854Q9UHT4 67 aa17.59■□□□□ 0.41
CPNE1-203ENST00000397442 DNAH11Q96DT5 4516 aa17.59■□□□□ 0.41
CPNE1-203ENST00000397442 VPREB1P12018 145 aa17.58■□□□□ 0.4
CPNE1-203ENST00000397442 KRTAP10-2P60368 255 aa17.58■□□□□ 0.4
CPNE1-203ENST00000397442 IGLV5-52A0A0A0MRZ9 124 aa17.57■□□□□ 0.4
CPNE1-203ENST00000397442 IGKV2-24A0A0C4DH68 120 aa17.55■□□□□ 0.4
CPNE1-203ENST00000397442 SERTAD4-AS1Q5TG53 156 aa17.55■□□□□ 0.4
CPNE1-203ENST00000397442 PLA2G2DQ9UNK4 145 aa17.55■□□□□ 0.4
CPNE1-203ENST00000397442 PKIGQ9Y2B9 76 aa17.55■□□□□ 0.4
CPNE1-203ENST00000397442 FAM168BA1KXE4 195 aa17.54■□□□□ 0.4
CPNE1-203ENST00000397442 NCR3O14931 201 aa17.54■□□□□ 0.4
CPNE1-203ENST00000397442 KRTAP7-1Q8IUC3 87 aa17.54■□□□□ 0.4
CPNE1-203ENST00000397442 CHTF8P0CG12 524 aa17.53■□□□□ 0.4
CPNE1-203ENST00000397442 LINC00336Q6ZUF6 198 aa17.52■□□□□ 0.4
CPNE1-203ENST00000397442 TRAV13-2A0A0B4J235 113 aa17.52■□□□□ 0.39
CPNE1-203ENST00000397442 RPL13AP40429 203 aaKnown RBP17.52■□□□□ 0.39
CPNE1-203ENST00000397442 PGPEP1Q9NXJ5 209 aa17.52■□□□□ 0.39
CPNE1-203ENST00000397442 TSPAN13O95857 204 aa17.51■□□□□ 0.39
CPNE1-203ENST00000397442 TRBV10-2A0A0K0K1G8 114 aa17.5■□□□□ 0.39
CPNE1-203ENST00000397442 PKD1P98161 4303 aa17.5■□□□□ 0.39
CPNE1-203ENST00000397442 PANO1I0J062 215 aa17.49■□□□□ 0.39
CPNE1-203ENST00000397442 NAA38Q9BRA0 125 aaKnown RBP17.48■□□□□ 0.39
CPNE1-203ENST00000397442 H7C2G1 150 aa17.48■□□□□ 0.39
CPNE1-203ENST00000397442 IGLV5-37A0A075B6J1 123 aa17.47■□□□□ 0.39
CPNE1-203ENST00000397442 C9orf118A6NHY6 69 aa17.47■□□□□ 0.39
CPNE1-203ENST00000397442 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.46■□□□□ 0.39
CPNE1-203ENST00000397442 A0A1W2PNN7 141 aa17.45■□□□□ 0.38
CPNE1-203ENST00000397442 OR13C6PQ8NH95 151 aa17.45■□□□□ 0.38
CPNE1-203ENST00000397442 FAM19A5Q7Z5A7 132 aaPredicted RBP17.45■□□□□ 0.38
CPNE1-203ENST00000397442 LINC00474Q9P2X8 69 aa17.45■□□□□ 0.38
CPNE1-203ENST00000397442 H3BUT2 72 aa17.44■□□□□ 0.38
CPNE1-203ENST00000397442 M0R378 163 aa17.44■□□□□ 0.38
CPNE1-203ENST00000397442 DNAH5Q8TE73 4624 aa17.43■□□□□ 0.38
CPNE1-203ENST00000397442 IGLV6-57P01721 117 aa17.43■□□□□ 0.38
CPNE1-203ENST00000397442 SPACA4Q8TDM5 124 aa17.43■□□□□ 0.38
CPNE1-203ENST00000397442 NKAPP1Q8N9T2 125 aa17.42■□□□□ 0.38
CPNE1-203ENST00000397442 TMEM126AQ9H061 195 aa17.42■□□□□ 0.38
CPNE1-203ENST00000397442 Q1RN00 199 aa17.41■□□□□ 0.38
CPNE1-203ENST00000397442 S100A7L2Q5SY68 101 aa17.41■□□□□ 0.38
CPNE1-203ENST00000397442 C22orf24Q9Y442 160 aa17.41■□□□□ 0.38
CPNE1-203ENST00000397442 C7orf33Q8WU49 177 aa17.4■□□□□ 0.38
CPNE1-203ENST00000397442 TRBV10-3A0A0K0K1G6 114 aa17.39■□□□□ 0.37
CPNE1-203ENST00000397442 A0A1B0GVY2 172 aa17.39■□□□□ 0.37
CPNE1-203ENST00000397442 SMIM11BQ8TCY0 68 aa17.39■□□□□ 0.37
CPNE1-203ENST00000397442 GAGE10A6NGK3 116 aa17.36■□□□□ 0.37
CPNE1-203ENST00000397442 TRIAP1O43715 76 aa17.36■□□□□ 0.37
CPNE1-203ENST00000397442 RPL28P46779 137 aaKnown RBP17.36■□□□□ 0.37
CPNE1-203ENST00000397442 A0A1W2PPM0 123 aa17.35■□□□□ 0.37
CPNE1-203ENST00000397442 EPM2AB3EWF7 344 aa17.35■□□□□ 0.37
CPNE1-203ENST00000397442 M0QXV9 152 aa17.35■□□□□ 0.37
CPNE1-203ENST00000397442 MRPL55Q7Z7F7 128 aaKnown RBP17.35■□□□□ 0.37
CPNE1-203ENST00000397442 RYR3Q15413 4870 aa17.34■□□□□ 0.37
CPNE1-203ENST00000397442 LINC00167Q96N53 147 aa17.34■□□□□ 0.37
CPNE1-203ENST00000397442 A0A1B0GV90 55 aa17.33■□□□□ 0.37
CPNE1-203ENST00000397442 KRTAP10-1P60331 282 aa17.33■□□□□ 0.37
CPNE1-203ENST00000397442 PSMB2P49721 201 aa17.32■□□□□ 0.36
CPNE1-203ENST00000397442 A0A087WYN8 130 aa17.32■□□□□ 0.36
CPNE1-203ENST00000397442 DPH3Q96FX2 82 aa17.32■□□□□ 0.36
CPNE1-203ENST00000397442 IGLV1-50A0A075B6I6 118 aa17.29■□□□□ 0.36
CPNE1-203ENST00000397442 RPL37AP8A6NKH3 93 aa17.29■□□□□ 0.36
CPNE1-203ENST00000397442 FAM30AQ9NZY2 134 aa17.29■□□□□ 0.36
CPNE1-203ENST00000397442 TRAV23DV6A0A075B6W5 121 aa17.28■□□□□ 0.36
CPNE1-203ENST00000397442 PHF5AQ7RTV0 110 aaKnown RBP17.28■□□□□ 0.36
CPNE1-203ENST00000397442 FABP2P12104 132 aa17.27■□□□□ 0.36
CPNE1-203ENST00000397442 Q6ZSA8 131 aa17.27■□□□□ 0.36
CPNE1-203ENST00000397442 PLAC8Q9NZF1 115 aa17.27■□□□□ 0.36
CPNE1-203ENST00000397442 KCNQ1DNQ9H478 68 aa17.26■□□□□ 0.35
CPNE1-203ENST00000397442 PKHD1P08F94 4074 aa17.24■□□□□ 0.35
CPNE1-203ENST00000397442 C6orf99Q4VX62 202 aa17.24■□□□□ 0.35
CPNE1-203ENST00000397442 DNAH8Q96JB1 4490 aa17.24■□□□□ 0.35
CPNE1-203ENST00000397442 SCGB1C2P0DMR2 95 aa17.23■□□□□ 0.35
CPNE1-203ENST00000397442 ZNF73O43830 326 aaPredicted RBP17.23■□□□□ 0.35
CPNE1-203ENST00000397442 COX6CP09669 75 aa17.22■□□□□ 0.35
CPNE1-203ENST00000397442 KRTAP11-1Q8IUC1 163 aa17.22■□□□□ 0.35
CPNE1-203ENST00000397442 VAMP3Q15836 100 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms