RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 MRPL54Q6P161 138 aaKnown RBP5.46□□□□□ -1.54
NEDD9-203ENST00000397378 VAMP8Q9BV40 100 aa5.46□□□□□ -1.54
NEDD9-203ENST00000397378 SPANXDQ9BXN6 97 aa5.46□□□□□ -1.54
NEDD9-203ENST00000397378 CYSLTR1Q9Y271 337 aa5.46□□□□□ -1.54
NEDD9-203ENST00000397378 TRBV24-1A0A075B6N3 115 aa5.45□□□□□ -1.54
NEDD9-203ENST00000397378 CFC1BP0CG36 223 aa5.45□□□□□ -1.54
NEDD9-203ENST00000397378 RPL39P62891 51 aaKnown RBP5.45□□□□□ -1.54
NEDD9-203ENST00000397378 HBBP68871 147 aa5.45□□□□□ -1.54
NEDD9-203ENST00000397378 C22orf24Q9Y442 160 aa5.45□□□□□ -1.54
NEDD9-203ENST00000397378 TMEM250H0YL14 139 aa5.44□□□□□ -1.54
NEDD9-203ENST00000397378 KRTAP13-2Q52LG2 175 aa5.44□□□□□ -1.54
NEDD9-203ENST00000397378 C2orf82Q6UX34 121 aa5.44□□□□□ -1.54
NEDD9-203ENST00000397378 C20orf78Q9BR46 151 aa5.44□□□□□ -1.54
NEDD9-203ENST00000397378 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
NEDD9-203ENST00000397378 PPDPFQ9H3Y8 114 aa5.44□□□□□ -1.54
NEDD9-203ENST00000397378 B5MCH6 92 aa5.43□□□□□ -1.54
NEDD9-203ENST00000397378 BCE1O60756 84 aa5.43□□□□□ -1.54
NEDD9-203ENST00000397378 RIGQ13278 110 aa5.43□□□□□ -1.54
NEDD9-203ENST00000397378 LINC00173Q6ZV60 143 aa5.43□□□□□ -1.54
NEDD9-203ENST00000397378 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
NEDD9-203ENST00000397378 ANAPC13Q9BS18 74 aa5.43□□□□□ -1.54
NEDD9-203ENST00000397378 TP73-AS1Q9UF72 201 aa5.43□□□□□ -1.54
NEDD9-203ENST00000397378 PRO0628Q9UI54 55 aa5.43□□□□□ -1.54
NEDD9-203ENST00000397378 A6NDN8 102 aa5.42□□□□□ -1.54
NEDD9-203ENST00000397378 ZNF727A8MUV8 499 aa5.42□□□□□ -1.54
NEDD9-203ENST00000397378 J3KT08 172 aa5.42□□□□□ -1.54
NEDD9-203ENST00000397378 ASB16-AS1Q495Z4 193 aa5.42□□□□□ -1.54
NEDD9-203ENST00000397378 FAM229BQ4G0N7 80 aa5.42□□□□□ -1.54
NEDD9-203ENST00000397378 LINC00242Q5T6M2 205 aa5.42□□□□□ -1.54
NEDD9-203ENST00000397378 LINC01561Q8N1V8 128 aa5.42□□□□□ -1.54
NEDD9-203ENST00000397378 TRGC2P03986 189 aa5.41□□□□□ -1.54
NEDD9-203ENST00000397378 MRPL51Q4U2R6 128 aaKnown RBP5.41□□□□□ -1.54
NEDD9-203ENST00000397378 FAM104BQ5XKR9 115 aa5.41□□□□□ -1.54
NEDD9-203ENST00000397378 MRPL55Q7Z7F7 128 aaKnown RBP5.41□□□□□ -1.54
NEDD9-203ENST00000397378 OSTCQ9NRP0 149 aa5.41□□□□□ -1.54
NEDD9-203ENST00000397378 ANAPC11Q9NYG5 84 aa5.41□□□□□ -1.54
NEDD9-203ENST00000397378 IGLC3P0DOY3 106 aa5.4□□□□□ -1.54
NEDD9-203ENST00000397378 SMIM2Q9BVW6 85 aa5.4□□□□□ -1.54
NEDD9-203ENST00000397378 XAGE1AQ9HD64 81 aa5.4□□□□□ -1.54
NEDD9-203ENST00000397378 PYGO1Q9Y3Y4 419 aa5.4□□□□□ -1.54
NEDD9-203ENST00000397378 TINCRA0A1B0GVN0 87 aa5.39□□□□□ -1.55
NEDD9-203ENST00000397378 TAX1BP3O14907 124 aa5.39□□□□□ -1.55
NEDD9-203ENST00000397378 LORP23490 312 aaPredicted RBP5.39□□□□□ -1.55
NEDD9-203ENST00000397378 IFI27P40305 119 aaPredicted RBP5.39□□□□□ -1.55
NEDD9-203ENST00000397378 MT1HP80294 61 aa5.39□□□□□ -1.55
NEDD9-203ENST00000397378 PNRC1Q12796 327 aaPredicted RBP5.39□□□□□ -1.55
NEDD9-203ENST00000397378 C4orf48Q5BLP8 95 aa5.39□□□□□ -1.55
NEDD9-203ENST00000397378 LCE2CQ5TA81 110 aa5.39□□□□□ -1.55
NEDD9-203ENST00000397378 Q6ZN92 141 aa5.39□□□□□ -1.55
NEDD9-203ENST00000397378 KRTAP13-1Q8IUC0 172 aa5.39□□□□□ -1.55
NEDD9-203ENST00000397378 LINC00337Q8N6G1 96 aa5.39□□□□□ -1.55
NEDD9-203ENST00000397378 MAP1LC3AQ9H492 121 aa5.39□□□□□ -1.55
NEDD9-203ENST00000397378 V9GYV3 84 aa5.39□□□□□ -1.55
NEDD9-203ENST00000397378 IGLV4-3A0A075B6K6 122 aa5.38□□□□□ -1.55
NEDD9-203ENST00000397378 K7EP34 96 aa5.38□□□□□ -1.55
NEDD9-203ENST00000397378 PRSS2P07478 247 aa5.38□□□□□ -1.55
NEDD9-203ENST00000397378 CKS2P33552 79 aa5.38□□□□□ -1.55
NEDD9-203ENST00000397378 KRTAP10-6P60371 365 aaPredicted RBP5.38□□□□□ -1.55
NEDD9-203ENST00000397378 Q6Q795 121 aa5.38□□□□□ -1.55
NEDD9-203ENST00000397378 TMEM141Q96I45 108 aa5.38□□□□□ -1.55
NEDD9-203ENST00000397378 IGKV2D-26A0A0A0MRZ7 120 aa5.37□□□□□ -1.55
NEDD9-203ENST00000397378 SEC61BP60468 96 aaKnown RBP5.37□□□□□ -1.55
NEDD9-203ENST00000397378 SEC11AP67812 179 aa5.37□□□□□ -1.55
NEDD9-203ENST00000397378 ADIRFQ15847 76 aa5.37□□□□□ -1.55
NEDD9-203ENST00000397378 Q8IZM0 81 aa5.37□□□□□ -1.55
NEDD9-203ENST00000397378 LINC00167Q96N53 147 aa5.37□□□□□ -1.55
NEDD9-203ENST00000397378 SMIM7Q9BQ49 75 aa5.37□□□□□ -1.55
NEDD9-203ENST00000397378 RPL37AP8A6NKH3 93 aa5.36□□□□□ -1.55
NEDD9-203ENST00000397378 UBE2AP49459 152 aa5.36□□□□□ -1.55
NEDD9-203ENST00000397378 PMCHL1Q16048 86 aa5.36□□□□□ -1.55
NEDD9-203ENST00000397378 FP248Q71RG6 208 aaPredicted RBP5.36□□□□□ -1.55
NEDD9-203ENST00000397378 EIF5A2Q9GZV4 153 aaKnown RBP5.36□□□□□ -1.55
NEDD9-203ENST00000397378 TOMM7Q9P0U1 55 aa5.36□□□□□ -1.55
NEDD9-203ENST00000397378 D6R8Y8 96 aa5.35□□□□□ -1.55
NEDD9-203ENST00000397378 F8VRH5 84 aa5.35□□□□□ -1.55
NEDD9-203ENST00000397378 NPYP01303 97 aa5.35□□□□□ -1.55
NEDD9-203ENST00000397378 SPINK8P0C7L1 97 aa5.35□□□□□ -1.55
NEDD9-203ENST00000397378 IGLV5-37A0A075B6J1 123 aa5.34□□□□□ -1.55
NEDD9-203ENST00000397378 F8W1H4 67 aa5.34□□□□□ -1.55
NEDD9-203ENST00000397378 KRTAP13-3Q3SY46 172 aa5.34□□□□□ -1.55
NEDD9-203ENST00000397378 SPAG11AQ6PDA7 123 aa5.34□□□□□ -1.55
NEDD9-203ENST00000397378 FAM19A3Q7Z5A8 133 aa5.34□□□□□ -1.55
NEDD9-203ENST00000397378 AMELXQ99217 191 aa5.34□□□□□ -1.55
NEDD9-203ENST00000397378 SMIM27A0A1W2PRY6 76 aa5.33□□□□□ -1.56
NEDD9-203ENST00000397378 C9JAW5 83 aa5.33□□□□□ -1.56
NEDD9-203ENST00000397378 H3BRM9 83 aa5.33□□□□□ -1.56
NEDD9-203ENST00000397378 CXCL5P42830 114 aa5.33□□□□□ -1.56
NEDD9-203ENST00000397378 HINT1P49773 126 aaPredicted RBP5.33□□□□□ -1.56
NEDD9-203ENST00000397378 TAL2Q16559 108 aa5.33□□□□□ -1.56
NEDD9-203ENST00000397378 SPATA45Q537H7 98 aa5.33□□□□□ -1.56
NEDD9-203ENST00000397378 PAM16Q9Y3D7 125 aa5.33□□□□□ -1.56
NEDD9-203ENST00000397378 C9orf118A6NHY6 69 aa5.32□□□□□ -1.56
NEDD9-203ENST00000397378 M0R2T5 61 aa5.32□□□□□ -1.56
NEDD9-203ENST00000397378 C2orf66Q6UXQ4 117 aa5.32□□□□□ -1.56
NEDD9-203ENST00000397378 PMCHL2Q9BQD1 86 aa5.32□□□□□ -1.56
NEDD9-203ENST00000397378 SRP19P09132 144 aaKnown RBP5.31□□□□□ -1.56
NEDD9-203ENST00000397378 ZC2HC1BQ5TFG8 222 aa5.31□□□□□ -1.56
NEDD9-203ENST00000397378 ORMDL3Q8N138 153 aa5.31□□□□□ -1.56
NEDD9-203ENST00000397378 C3orf22Q8N5N4 141 aa5.31□□□□□ -1.56
NEDD9-203ENST00000397378 NKAPP1Q8N9T2 125 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms