RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 DNAH9Q9NYC9 4486 aa11.49□□□□□ -0.57
SCNN1A-205ENST00000396966 DNAL4O96015 105 aa11.48□□□□□ -0.57
SCNN1A-205ENST00000396966 C9orf116Q5BN46 136 aaPredicted RBP11.48□□□□□ -0.57
SCNN1A-205ENST00000396966 COX17Q14061 63 aa11.48□□□□□ -0.57
SCNN1A-205ENST00000396966 SVIPQ8NHG7 77 aa11.48□□□□□ -0.57
SCNN1A-205ENST00000396966 UPK3BQ9BT76 320 aa11.48□□□□□ -0.57
SCNN1A-205ENST00000396966 H0YGX0 51 aa11.47□□□□□ -0.57
SCNN1A-205ENST00000396966 KRTAP26-1Q6PEX3 210 aa11.47□□□□□ -0.57
SCNN1A-205ENST00000396966 IGKV2D-24A0A075B6R9 120 aa11.47□□□□□ -0.57
SCNN1A-205ENST00000396966 ANAPC13Q9BS18 74 aa11.47□□□□□ -0.57
SCNN1A-205ENST00000396966 COL7A1Q02388 2944 aa11.46□□□□□ -0.57
SCNN1A-205ENST00000396966 LECT2O14960 151 aa11.46□□□□□ -0.58
SCNN1A-205ENST00000396966 KRTAP21-3Q3LHN1 58 aa11.46□□□□□ -0.58
SCNN1A-205ENST00000396966 Q6Q795 121 aa11.46□□□□□ -0.58
SCNN1A-205ENST00000396966 C6orf223Q8N319 242 aa11.45□□□□□ -0.58
SCNN1A-205ENST00000396966 ZNF561-AS1K7EIQ3 104 aa11.43□□□□□ -0.58
SCNN1A-205ENST00000396966 UNQ6190/PRO20217Q6UXQ8 127 aa11.43□□□□□ -0.58
SCNN1A-205ENST00000396966 LINC00526Q96FQ7 95 aa11.43□□□□□ -0.58
SCNN1A-205ENST00000396966 SLPIP03973 132 aa11.43□□□□□ -0.58
SCNN1A-205ENST00000396966 ACYP1P07311 99 aa11.43□□□□□ -0.58
SCNN1A-205ENST00000396966 C9orf129Q5T035 196 aaKnown RBP11.42□□□□□ -0.58
SCNN1A-205ENST00000396966 NDUFV3P56181 108 aaKnown RBP11.42□□□□□ -0.58
SCNN1A-205ENST00000396966 APLNQ9ULZ1 77 aa11.42□□□□□ -0.58
SCNN1A-205ENST00000396966 C10orf25Q5T742 122 aa11.41□□□□□ -0.58
SCNN1A-205ENST00000396966 MUC7Q8TAX7 377 aa11.41□□□□□ -0.58
SCNN1A-205ENST00000396966 NUPR2A6NF83 97 aa11.41□□□□□ -0.58
SCNN1A-205ENST00000396966 INAFM2P0DMQ5 153 aa11.41□□□□□ -0.58
SCNN1A-205ENST00000396966 GAGE2AQ6NT46 116 aa11.41□□□□□ -0.58
SCNN1A-205ENST00000396966 SMCR5Q8TEV8 140 aa11.41□□□□□ -0.58
SCNN1A-205ENST00000396966 RMI2Q96E14 147 aa11.41□□□□□ -0.58
SCNN1A-205ENST00000396966 HIGD2BQ4VC39 106 aa11.4□□□□□ -0.58
SCNN1A-205ENST00000396966 UBE2DNLQ8IWF7 75 aa11.4□□□□□ -0.58
SCNN1A-205ENST00000396966 GVQW2A0A096LPI5 108 aaPredicted RBP11.4□□□□□ -0.59
SCNN1A-205ENST00000396966 C15orf56Q8N910 161 aa11.4□□□□□ -0.59
SCNN1A-205ENST00000396966 Q8NDZ9 215 aa11.39□□□□□ -0.59
SCNN1A-205ENST00000396966 CAMK2N2Q96S95 79 aa11.39□□□□□ -0.59
SCNN1A-205ENST00000396966 NCR3O14931 201 aa11.38□□□□□ -0.59
SCNN1A-205ENST00000396966 NDUFC2O95298 119 aa11.38□□□□□ -0.59
SCNN1A-205ENST00000396966 C2orf48Q96LS8 159 aa11.37□□□□□ -0.59
SCNN1A-205ENST00000396966 C14orf132Q9NPU4 83 aa11.37□□□□□ -0.59
SCNN1A-205ENST00000396966 STAB2Q8WWQ8 2551 aa11.37□□□□□ -0.59
SCNN1A-205ENST00000396966 TMEM126AQ9H061 195 aa11.36□□□□□ -0.59
SCNN1A-205ENST00000396966 C6orf48Q9UBA6 75 aa11.36□□□□□ -0.59
SCNN1A-205ENST00000396966 F8WDY8 70 aa11.36□□□□□ -0.59
SCNN1A-205ENST00000396966 TRBV7-7A0A0K0K1E9 115 aa11.35□□□□□ -0.59
SCNN1A-205ENST00000396966 ORMDL1Q9P0S3 153 aa11.34□□□□□ -0.59
SCNN1A-205ENST00000396966 SDIM1Q6ZPB5 146 aa11.33□□□□□ -0.6
SCNN1A-205ENST00000396966 LINC00643Q86TS7 51 aa11.33□□□□□ -0.6
SCNN1A-205ENST00000396966 S100A7L2Q5SY68 101 aa11.32□□□□□ -0.6
SCNN1A-205ENST00000396966 Q8N814 137 aa11.32□□□□□ -0.6
SCNN1A-205ENST00000396966 C6orf99Q4VX62 202 aa11.32□□□□□ -0.6
SCNN1A-205ENST00000396966 Q6ZRU5 148 aa11.32□□□□□ -0.6
SCNN1A-205ENST00000396966 OBSCN-AS1Q96MR7 158 aa11.32□□□□□ -0.6
SCNN1A-205ENST00000396966 SYCNQ0VAF6 134 aa11.3□□□□□ -0.6
SCNN1A-205ENST00000396966 IMUPQ9GZP8 106 aa11.29□□□□□ -0.6
SCNN1A-205ENST00000396966 USP17L23D6RBM5 183 aa11.29□□□□□ -0.6
SCNN1A-205ENST00000396966 RPL18AQ02543 176 aaKnown RBP11.28□□□□□ -0.6
SCNN1A-205ENST00000396966 LINC00167Q96N53 147 aa11.28□□□□□ -0.6
SCNN1A-205ENST00000396966 DYNC2H1Q8NCM8 4307 aaKnown RBP11.28□□□□□ -0.6
SCNN1A-205ENST00000396966 DNHD1Q96M86 4753 aa11.28□□□□□ -0.6
SCNN1A-205ENST00000396966 CCDC179H3BU77 68 aa11.27□□□□□ -0.6
SCNN1A-205ENST00000396966 A0A1B0GX51 115 aa11.27□□□□□ -0.61
SCNN1A-205ENST00000396966 CASC10Q5T4H9 136 aa11.27□□□□□ -0.61
SCNN1A-205ENST00000396966 XAGE1AQ9HD64 81 aa11.27□□□□□ -0.61
SCNN1A-205ENST00000396966 NDUFC2-KCTD14E9PQ53 114 aa11.26□□□□□ -0.61
SCNN1A-205ENST00000396966 FAM236AA0A1B0GUQ0 79 aa11.26□□□□□ -0.61
SCNN1A-205ENST00000396966 FAM236BA0A1B0GV22 79 aa11.26□□□□□ -0.61
SCNN1A-205ENST00000396966 KRTAP1-5Q9BYS1 174 aa11.26□□□□□ -0.61
SCNN1A-205ENST00000396966 B5MCH6 92 aa11.25□□□□□ -0.61
SCNN1A-205ENST00000396966 LINC00846Q9NV44 126 aa11.25□□□□□ -0.61
SCNN1A-205ENST00000396966 PRKDCP78527 4128 aaKnown RBP11.25□□□□□ -0.61
SCNN1A-205ENST00000396966 TMEM256-PLSCR3K7ERE1 68 aa11.24□□□□□ -0.61
SCNN1A-205ENST00000396966 MEGF8Q7Z7M0 2845 aa11.23□□□□□ -0.61
SCNN1A-205ENST00000396966 LINC00575Q6W349 94 aa11.23□□□□□ -0.61
SCNN1A-205ENST00000396966 PSCAO43653 123 aa11.23□□□□□ -0.61
SCNN1A-205ENST00000396966 IGLV6-57P01721 117 aa11.23□□□□□ -0.61
SCNN1A-205ENST00000396966 DNAH1Q9P2D7 4330 aa11.22□□□□□ -0.61
SCNN1A-205ENST00000396966 CSMD3Q7Z407 3707 aa11.21□□□□□ -0.62
SCNN1A-205ENST00000396966 TRBV10-3A0A0K0K1G6 114 aa11.2□□□□□ -0.62
SCNN1A-205ENST00000396966 hADV29S1A0JD25 119 aa11.2□□□□□ -0.62
SCNN1A-205ENST00000396966 JMJD7-PLA2G4BH0Y9G9 81 aa11.2□□□□□ -0.62
SCNN1A-205ENST00000396966 CCKP06307 115 aa11.2□□□□□ -0.62
SCNN1A-205ENST00000396966 Q6ZRP5 223 aa11.2□□□□□ -0.62
SCNN1A-205ENST00000396966 NBDYA0A0U1RRE5 68 aa11.19□□□□□ -0.62
SCNN1A-205ENST00000396966 IGKV3D-7A0A0C4DH55 119 aa11.19□□□□□ -0.62
SCNN1A-205ENST00000396966 TLX1NBP0CAT3 122 aa11.19□□□□□ -0.62
SCNN1A-205ENST00000396966 LYSTQ99698 3801 aa11.17□□□□□ -0.62
SCNN1A-205ENST00000396966 SS18L2Q9UHA2 77 aa11.17□□□□□ -0.62
SCNN1A-205ENST00000396966 TRAV23DV6A0A075B6W5 121 aa11.16□□□□□ -0.62
SCNN1A-205ENST00000396966 DNAH7Q8WXX0 4024 aa11.16□□□□□ -0.62
SCNN1A-205ENST00000396966 VPREB1P12018 145 aa11.15□□□□□ -0.62
SCNN1A-205ENST00000396966 C14orf177Q52M58 125 aa11.14□□□□□ -0.63
SCNN1A-205ENST00000396966 Q6ZQY7 126 aa11.14□□□□□ -0.63
SCNN1A-205ENST00000396966 DIRC1Q969H9 104 aa11.13□□□□□ -0.63
SCNN1A-205ENST00000396966 LAMTOR3Q9UHA4 124 aa11.13□□□□□ -0.63
SCNN1A-205ENST00000396966 PLECQ15149 4684 aaKnown RBP11.13□□□□□ -0.63
SCNN1A-205ENST00000396966 M0R378 163 aa11.13□□□□□ -0.63
SCNN1A-205ENST00000396966 Q6JHZ5 121 aa11.13□□□□□ -0.63
SCNN1A-205ENST00000396966 ZNF73O43830 326 aaPredicted RBP11.12□□□□□ -0.63
SCNN1A-205ENST00000396966 LOC107984640A0A0U1RRK4 108 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms