RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 COX17Q14061 63 aa12.94□□□□□ -0.34
HOXC6-202ENST00000394331 PRR15Q8IV56 129 aa12.94□□□□□ -0.34
HOXC6-202ENST00000394331 M0R2N4 97 aa12.93□□□□□ -0.34
HOXC6-202ENST00000394331 CSNK1G2-AS1Q8NCQ2 148 aa12.93□□□□□ -0.34
HOXC6-202ENST00000394331 CHD6Q8TD26 2715 aa12.92□□□□□ -0.34
HOXC6-202ENST00000394331 TRGV4A0A0C4DH28 118 aa12.92□□□□□ -0.34
HOXC6-202ENST00000394331 C6orf99Q4VX62 202 aa12.92□□□□□ -0.34
HOXC6-202ENST00000394331 IGLV4-60A0A075B6I1 120 aa12.91□□□□□ -0.34
HOXC6-202ENST00000394331 BPY2O14599 106 aa12.89□□□□□ -0.35
HOXC6-202ENST00000394331 PRYO14603 147 aa12.89□□□□□ -0.35
HOXC6-202ENST00000394331 MPLKIPQ8TAP9 179 aa12.89□□□□□ -0.35
HOXC6-202ENST00000394331 C11orf68Q9H3H3 251 aaKnown RBP12.89□□□□□ -0.35
HOXC6-202ENST00000394331 LOC100131303A0A0U1RQF7 123 aa12.89□□□□□ -0.35
HOXC6-202ENST00000394331 LINC00959A0A1B0GUT2 108 aa12.89□□□□□ -0.35
HOXC6-202ENST00000394331 MUC7Q8TAX7 377 aa12.88□□□□□ -0.35
HOXC6-202ENST00000394331 IGKV3OR2-268A0A0C4DH90 116 aa12.88□□□□□ -0.35
HOXC6-202ENST00000394331 Q6ZRU5 148 aa12.88□□□□□ -0.35
HOXC6-202ENST00000394331 CCDC168Q8NDH2 2452 aa12.88□□□□□ -0.35
HOXC6-202ENST00000394331 TRBV6-8A0A0A6YYG3 113 aa12.87□□□□□ -0.35
HOXC6-202ENST00000394331 Q6ZTC4 211 aa12.87□□□□□ -0.35
HOXC6-202ENST00000394331 FUSP35637 526 aaKnown RBP eCLIP12.87□□□□□ -0.35
HOXC6-202ENST00000394331 PRR3P79522 188 aaKnown RBP12.87□□□□□ -0.35
HOXC6-202ENST00000394331 FLNAP21333 2647 aaKnown RBP12.86□□□□□ -0.35
HOXC6-202ENST00000394331 ZNF469Q96JG9 3925 aaPredicted RBP12.85□□□□□ -0.35
HOXC6-202ENST00000394331 SPATA3Q8NHX4 192 aa12.85□□□□□ -0.35
HOXC6-202ENST00000394331 PMAIP1Q13794 54 aa12.84□□□□□ -0.35
HOXC6-202ENST00000394331 OCR1Q9BZK8 76 aa12.84□□□□□ -0.35
HOXC6-202ENST00000394331 PLA2G2AP14555 144 aa12.83□□□□□ -0.36
HOXC6-202ENST00000394331 AKAP9Q99996 3911 aa12.83□□□□□ -0.36
HOXC6-202ENST00000394331 IGHV4-28A0A0C4DH34 117 aa12.83□□□□□ -0.36
HOXC6-202ENST00000394331 NOTCH3Q9UM47 2321 aa12.81□□□□□ -0.36
HOXC6-202ENST00000394331 Q1T7F1 81 aa12.8□□□□□ -0.36
HOXC6-202ENST00000394331 Q6ZQY7 126 aa12.78□□□□□ -0.36
HOXC6-202ENST00000394331 NF1P21359 2839 aa12.78□□□□□ -0.36
HOXC6-202ENST00000394331 C2CD3Q4AC94 2353 aa12.78□□□□□ -0.36
HOXC6-202ENST00000394331 J3QKU1 62 aa12.78□□□□□ -0.36
HOXC6-202ENST00000394331 DEFB130BP0DP73 79 aa12.78□□□□□ -0.36
HOXC6-202ENST00000394331 DEFB130AP0DP74 79 aa12.78□□□□□ -0.36
HOXC6-202ENST00000394331 KIAA0087Q14695 138 aa12.78□□□□□ -0.36
HOXC6-202ENST00000394331 LINC00612Q8N6U2 182 aa12.78□□□□□ -0.36
HOXC6-202ENST00000394331 IGLV6-57P01721 117 aa12.77□□□□□ -0.37
HOXC6-202ENST00000394331 A0A1B0GUV1 79 aa12.76□□□□□ -0.37
HOXC6-202ENST00000394331 hDV103S1A0JD37 113 aa12.76□□□□□ -0.37
HOXC6-202ENST00000394331 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.76□□□□□ -0.37
HOXC6-202ENST00000394331 IGKV4-1P06312 121 aa12.76□□□□□ -0.37
HOXC6-202ENST00000394331 SCXQ7RTU7 201 aa12.76□□□□□ -0.37
HOXC6-202ENST00000394331 JMJD1CQ15652 2540 aa12.76□□□□□ -0.37
HOXC6-202ENST00000394331 SETD2Q9BYW2 2564 aaPredicted RBP12.75□□□□□ -0.37
HOXC6-202ENST00000394331 Q8NDZ9 215 aa12.75□□□□□ -0.37
HOXC6-202ENST00000394331 ACANP16112 2415 aa12.74□□□□□ -0.37
HOXC6-202ENST00000394331 CD164L2Q6UWJ8 174 aa12.74□□□□□ -0.37
HOXC6-202ENST00000394331 COX7BP24311 80 aa12.73□□□□□ -0.37
HOXC6-202ENST00000394331 KRTAP10-3P60369 221 aa12.73□□□□□ -0.37
HOXC6-202ENST00000394331 GYPEP15421 78 aa12.73□□□□□ -0.37
HOXC6-202ENST00000394331 SETXQ7Z333 2677 aaKnown RBP12.72□□□□□ -0.37
HOXC6-202ENST00000394331 PDZD2O15018 2839 aa12.72□□□□□ -0.37
HOXC6-202ENST00000394331 LCE6AA0A183 80 aa12.72□□□□□ -0.37
HOXC6-202ENST00000394331 MTORP42345 2549 aa12.71□□□□□ -0.37
HOXC6-202ENST00000394331 PRO0255Q9UI72 69 aa12.71□□□□□ -0.38
HOXC6-202ENST00000394331 X6R8D5 127 aa12.71□□□□□ -0.38
HOXC6-202ENST00000394331 NBPF19A0A087WUL8 3843 aa12.69□□□□□ -0.38
HOXC6-202ENST00000394331 SMR3AQ99954 134 aa12.68□□□□□ -0.38
HOXC6-202ENST00000394331 Q6ZRP5 223 aa12.68□□□□□ -0.38
HOXC6-202ENST00000394331 HIGD2AQ9BW72 106 aa12.68□□□□□ -0.38
HOXC6-202ENST00000394331 LYRM9A8MSI8 78 aa12.66□□□□□ -0.38
HOXC6-202ENST00000394331 ANK3Q12955 4377 aaKnown RBP12.66□□□□□ -0.38
HOXC6-202ENST00000394331 CD164Q04900 197 aa12.66□□□□□ -0.38
HOXC6-202ENST00000394331 DIRC1Q969H9 104 aa12.66□□□□□ -0.38
HOXC6-202ENST00000394331 CELA1Q9UNI1 258 aa12.65□□□□□ -0.38
HOXC6-202ENST00000394331 HIVEP2P31629 2446 aa12.65□□□□□ -0.38
HOXC6-202ENST00000394331 CUBNO60494 3623 aa12.64□□□□□ -0.39
HOXC6-202ENST00000394331 TENM4Q6N022 2769 aa12.64□□□□□ -0.39
HOXC6-202ENST00000394331 C9orf116Q5BN46 136 aaPredicted RBP12.63□□□□□ -0.39
HOXC6-202ENST00000394331 DAD1P61803 113 aa12.62□□□□□ -0.39
HOXC6-202ENST00000394331 NIPBLQ6KC79 2804 aaeCLIP12.62□□□□□ -0.39
HOXC6-202ENST00000394331 IGHV4-30-4P0DP06 118 aa12.61□□□□□ -0.39
HOXC6-202ENST00000394331 ELOF1P60002 83 aaKnown RBP12.61□□□□□ -0.39
HOXC6-202ENST00000394331 A0A0J9YWU9 116 aa12.61□□□□□ -0.39
HOXC6-202ENST00000394331 LINC00269Q8N2A0 174 aa12.61□□□□□ -0.39
HOXC6-202ENST00000394331 Q8N9L7 120 aa12.61□□□□□ -0.39
HOXC6-202ENST00000394331 C1orf64Q8NEQ6 169 aa12.61□□□□□ -0.39
HOXC6-202ENST00000394331 A0A096LPF7 62 aa12.6□□□□□ -0.39
HOXC6-202ENST00000394331 APOC4P55056 127 aa12.6□□□□□ -0.39
HOXC6-202ENST00000394331 ZCCHC13Q8WW36 166 aaKnown RBP12.59□□□□□ -0.39
HOXC6-202ENST00000394331 CYP4F30PQ9H0H9 118 aa12.59□□□□□ -0.39
HOXC6-202ENST00000394331 CLPSL2Q6UWE3 100 aa12.58□□□□□ -0.4
HOXC6-202ENST00000394331 DEFB135Q30KP9 77 aa12.58□□□□□ -0.4
HOXC6-202ENST00000394331 CHCHD10Q8WYQ3 142 aaPredicted RBP12.58□□□□□ -0.4
HOXC6-202ENST00000394331 ITPR2Q14571 2701 aa12.57□□□□□ -0.4
HOXC6-202ENST00000394331 ZNF73O43830 326 aaPredicted RBP12.57□□□□□ -0.4
HOXC6-202ENST00000394331 TRAV22A0A0B4J277 110 aa12.55□□□□□ -0.4
HOXC6-202ENST00000394331 UNC79Q9P2D8 2635 aa12.55□□□□□ -0.4
HOXC6-202ENST00000394331 A0A1B0GW54 56 aa12.55□□□□□ -0.4
HOXC6-202ENST00000394331 FN1P02751 2386 aaKnown RBP12.55□□□□□ -0.4
HOXC6-202ENST00000394331 GVQW2A0A096LPI5 108 aaPredicted RBP12.54□□□□□ -0.4
HOXC6-202ENST00000394331 DEFB4AO15263 64 aa12.54□□□□□ -0.4
HOXC6-202ENST00000394331 HIGD2BQ4VC39 106 aa12.53□□□□□ -0.4
HOXC6-202ENST00000394331 ANGP03950 147 aaKnown RBP12.52□□□□□ -0.4
HOXC6-202ENST00000394331 REG3AQ06141 175 aa12.52□□□□□ -0.41
HOXC6-202ENST00000394331 INAFM1C9JVW0 142 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms