RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 BAGE3Q86Y29 109 aa10.13□□□□□ -0.79
SNRPA1-202ENST00000394082 TMEM126AQ9H061 195 aa10.13□□□□□ -0.79
SNRPA1-202ENST00000394082 SND1-IT1Q9HBX3 110 aa10.13□□□□□ -0.79
SNRPA1-202ENST00000394082 PFN2P35080 140 aa10.12□□□□□ -0.79
SNRPA1-202ENST00000394082 ERG28Q9UKR5 140 aa10.12□□□□□ -0.79
SNRPA1-202ENST00000394082 HSBP1O75506 76 aa10.11□□□□□ -0.79
SNRPA1-202ENST00000394082 PRLHP81277 87 aa10.11□□□□□ -0.79
SNRPA1-202ENST00000394082 KRTAP9-2Q9BYQ4 174 aa10.11□□□□□ -0.79
SNRPA1-202ENST00000394082 SCO1O75880 301 aa10.1□□□□□ -0.79
SNRPA1-202ENST00000394082 FAM19A1Q7Z5A9 133 aa10.1□□□□□ -0.79
SNRPA1-202ENST00000394082 PLEKHB2Q96CS7 222 aa10.1□□□□□ -0.79
SNRPA1-202ENST00000394082 RETNLBQ9BQ08 111 aa10.1□□□□□ -0.79
SNRPA1-202ENST00000394082 COLCA2A8K830 154 aa10.09□□□□□ -0.79
SNRPA1-202ENST00000394082 M0R378 163 aa10.09□□□□□ -0.79
SNRPA1-202ENST00000394082 ZNF22P17026 224 aaPredicted RBP10.09□□□□□ -0.79
SNRPA1-202ENST00000394082 CDIP1Q9H305 208 aa10.09□□□□□ -0.79
SNRPA1-202ENST00000394082 MUC17Q685J3 4493 aa10.09□□□□□ -0.79
SNRPA1-202ENST00000394082 IGLV7-46A0A075B6I9 117 aa10.08□□□□□ -0.8
SNRPA1-202ENST00000394082 TMEM238C9JI98 176 aa10.08□□□□□ -0.8
SNRPA1-202ENST00000394082 SPAG11AQ6PDA7 123 aa10.07□□□□□ -0.8
SNRPA1-202ENST00000394082 IFI27L1Q96BM0 104 aa10.06□□□□□ -0.8
SNRPA1-202ENST00000394082 SERF1AO75920 110 aa10.04□□□□□ -0.8
SNRPA1-202ENST00000394082 FAM19A2Q8N3H0 131 aa10.04□□□□□ -0.8
SNRPA1-202ENST00000394082 ZNF625Q96I27 306 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-202ENST00000394082 CHTOPQ9Y3Y2 248 aaKnown RBP10.04□□□□□ -0.8
SNRPA1-202ENST00000394082 Q8NDZ9 215 aa10.03□□□□□ -0.8
SNRPA1-202ENST00000394082 TMEM170BQ5T4T1 132 aa10.02□□□□□ -0.81
SNRPA1-202ENST00000394082 FP248Q71RG6 208 aaPredicted RBP10.02□□□□□ -0.81
SNRPA1-202ENST00000394082 TRAV12-1A0A0B4J245 112 aa10.01□□□□□ -0.81
SNRPA1-202ENST00000394082 C11orf86A6NJI1 115 aa10.01□□□□□ -0.81
SNRPA1-202ENST00000394082 C3orf22Q8N5N4 141 aa10.01□□□□□ -0.81
SNRPA1-202ENST00000394082 PPDPFQ9H3Y8 114 aa10.01□□□□□ -0.81
SNRPA1-202ENST00000394082 LEPROTL1O95214 131 aa10□□□□□ -0.81
SNRPA1-202ENST00000394082 SPRR4Q96PI1 79 aa10□□□□□ -0.81
SNRPA1-202ENST00000394082 HIGD2AQ9BW72 106 aa10□□□□□ -0.81
SNRPA1-202ENST00000394082 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
SNRPA1-202ENST00000394082 HSPB8Q9UJY1 196 aa9.99□□□□□ -0.81
SNRPA1-202ENST00000394082 H0Y8G0 127 aa9.98□□□□□ -0.81
SNRPA1-202ENST00000394082 LINC00310P59036 64 aa9.98□□□□□ -0.81
SNRPA1-202ENST00000394082 LINC00158P58513 81 aa9.97□□□□□ -0.81
SNRPA1-202ENST00000394082 FABP4P15090 132 aa9.96□□□□□ -0.82
SNRPA1-202ENST00000394082 C4orf48Q5BLP8 95 aa9.96□□□□□ -0.82
SNRPA1-202ENST00000394082 LINC00337Q8N6G1 96 aa9.96□□□□□ -0.82
SNRPA1-202ENST00000394082 PRYO14603 147 aa9.95□□□□□ -0.82
SNRPA1-202ENST00000394082 HIST1H2BKO60814 126 aa9.95□□□□□ -0.82
SNRPA1-202ENST00000394082 HIST1H2BJP06899 126 aa9.95□□□□□ -0.82
SNRPA1-202ENST00000394082 HIST1H2BOP23527 126 aa9.95□□□□□ -0.82
SNRPA1-202ENST00000394082 HIST1H2BBP33778 126 aa9.95□□□□□ -0.82
SNRPA1-202ENST00000394082 SPRR1AP35321 89 aa9.95□□□□□ -0.82
SNRPA1-202ENST00000394082 HIST1H2BDP58876 126 aa9.95□□□□□ -0.82
SNRPA1-202ENST00000394082 HIST1H2BCP62807 126 aa9.95□□□□□ -0.82
SNRPA1-202ENST00000394082 HIST2H2BEQ16778 126 aa9.95□□□□□ -0.82
SNRPA1-202ENST00000394082 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.95□□□□□ -0.82
SNRPA1-202ENST00000394082 HIST1H2BHQ93079 126 aa9.95□□□□□ -0.82
SNRPA1-202ENST00000394082 HIST1H2BNQ99877 126 aa9.95□□□□□ -0.82
SNRPA1-202ENST00000394082 HIST1H2BMQ99879 126 aa9.95□□□□□ -0.82
SNRPA1-202ENST00000394082 TMEM223A0PJW6 202 aa9.94□□□□□ -0.82
SNRPA1-202ENST00000394082 KCNQ1DNQ9H478 68 aa9.94□□□□□ -0.82
SNRPA1-202ENST00000394082 LINC00587B1AMM8 73 aa9.92□□□□□ -0.82
SNRPA1-202ENST00000394082 KRTAP4-16G5E9R7 235 aaPredicted RBP9.92□□□□□ -0.82
SNRPA1-202ENST00000394082 SPINK1P00995 79 aa9.92□□□□□ -0.82
SNRPA1-202ENST00000394082 S100A1P23297 94 aa9.92□□□□□ -0.82
SNRPA1-202ENST00000394082 PLNP26678 52 aa9.91□□□□□ -0.82
SNRPA1-202ENST00000394082 HERV-K104P63124 156 aa9.91□□□□□ -0.82
SNRPA1-202ENST00000394082 KRTAP13-3Q3SY46 172 aa9.91□□□□□ -0.82
SNRPA1-202ENST00000394082 MAP1LC3CQ9BXW4 147 aa9.91□□□□□ -0.82
SNRPA1-202ENST00000394082 ATP6V1G1O75348 118 aa9.9□□□□□ -0.82
SNRPA1-202ENST00000394082 LINC00483Q53H64 154 aa9.9□□□□□ -0.82
SNRPA1-202ENST00000394082 BOD1L2Q8IYS8 172 aa9.9□□□□□ -0.82
SNRPA1-202ENST00000394082 Q8NBF4 154 aa9.9□□□□□ -0.82
SNRPA1-202ENST00000394082 SMIM13P0DJ93 91 aa9.89□□□□□ -0.83
SNRPA1-202ENST00000394082 RPS29P62273 56 aaKnown RBP9.89□□□□□ -0.83
SNRPA1-202ENST00000394082 ASB16-AS1Q495Z4 193 aa9.89□□□□□ -0.83
SNRPA1-202ENST00000394082 A0A0U1RRA0 63 aa9.88□□□□□ -0.83
SNRPA1-202ENST00000394082 DPM2O94777 84 aa9.88□□□□□ -0.83
SNRPA1-202ENST00000394082 SMCR5Q8TEV8 140 aa9.88□□□□□ -0.83
SNRPA1-202ENST00000394082 ETDCA0A1B0GVM5 59 aa9.87□□□□□ -0.83
SNRPA1-202ENST00000394082 HERVK_113P61574 105 aa9.87□□□□□ -0.83
SNRPA1-202ENST00000394082 MIR7-3HGQ8N6C7 128 aa9.87□□□□□ -0.83
SNRPA1-202ENST00000394082 KRTAP9-6A0A140TA67 174 aa9.86□□□□□ -0.83
SNRPA1-202ENST00000394082 IGKCP01834 107 aa9.86□□□□□ -0.83
SNRPA1-202ENST00000394082 S100A12P80511 92 aa9.86□□□□□ -0.83
SNRPA1-202ENST00000394082 MEIG1Q5JSS6 88 aa9.86□□□□□ -0.83
SNRPA1-202ENST00000394082 DAND5Q8N907 189 aa9.86□□□□□ -0.83
SNRPA1-202ENST00000394082 PMCHL2Q9BQD1 86 aa9.86□□□□□ -0.83
SNRPA1-202ENST00000394082 LOC107984156A0A0G2JMH3 177 aa9.85□□□□□ -0.83
SNRPA1-202ENST00000394082 ARL17AQ8IVW1 177 aa9.85□□□□□ -0.83
SNRPA1-202ENST00000394082 TRBV10-3A0A0K0K1G6 114 aa9.84□□□□□ -0.83
SNRPA1-202ENST00000394082 NCR3O14931 201 aa9.84□□□□□ -0.83
SNRPA1-202ENST00000394082 SSBP3-AS1Q7Z2R9 100 aa9.84□□□□□ -0.83
SNRPA1-202ENST00000394082 MYMXA0A1B0GTQ4 84 aa9.83□□□□□ -0.84
SNRPA1-202ENST00000394082 SYS1-DBNDD2H3BUS1 97 aa9.83□□□□□ -0.84
SNRPA1-202ENST00000394082 COA6Q5JTJ3 125 aaKnown RBP9.83□□□□□ -0.84
SNRPA1-202ENST00000394082 NDUFA12Q9UI09 145 aa9.83□□□□□ -0.84
SNRPA1-202ENST00000394082 TRBV10-2A0A0K0K1G8 114 aa9.82□□□□□ -0.84
SNRPA1-202ENST00000394082 B5MCH6 92 aa9.82□□□□□ -0.84
SNRPA1-202ENST00000394082 LEPROTO15243 131 aa9.82□□□□□ -0.84
SNRPA1-202ENST00000394082 SEC61BP60468 96 aaKnown RBP9.82□□□□□ -0.84
SNRPA1-202ENST00000394082 LGALS3P17931 250 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-202ENST00000394082 PET117Q6UWS5 81 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms