RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 LECT2O14960 151 aa6.03□□□□□ -1.44
TDP1-202ENST00000393452 A0A1B0GX51 115 aa6.03□□□□□ -1.44
TDP1-202ENST00000393452 K7EIL1 84 aa6.03□□□□□ -1.44
TDP1-202ENST00000393452 PRB2P02812 416 aaPredicted RBP6.02□□□□□ -1.45
TDP1-202ENST00000393452 DNAH10OSP0CZ25 163 aa6.02□□□□□ -1.45
TDP1-202ENST00000393452 C15orf56Q8N910 161 aa6.02□□□□□ -1.45
TDP1-202ENST00000393452 LINC00167Q96N53 147 aa6.02□□□□□ -1.45
TDP1-202ENST00000393452 NBEAL1Q6ZS30 2694 aa6.02□□□□□ -1.45
TDP1-202ENST00000393452 TRAV10A0A0B4J240 114 aa6.02□□□□□ -1.45
TDP1-202ENST00000393452 ZNF561-AS1K7EIQ3 104 aa6.02□□□□□ -1.45
TDP1-202ENST00000393452 C15orf53Q8NAA6 179 aa6.02□□□□□ -1.45
TDP1-202ENST00000393452 ANAPC13Q9BS18 74 aa6.02□□□□□ -1.45
TDP1-202ENST00000393452 NCR3O14931 201 aa6.01□□□□□ -1.45
TDP1-202ENST00000393452 C2orf48Q96LS8 159 aa6.01□□□□□ -1.45
TDP1-202ENST00000393452 OBSCN-AS1Q96MR7 158 aa6.01□□□□□ -1.45
TDP1-202ENST00000393452 C1orf43Q9BWL3 253 aa6.01□□□□□ -1.45
TDP1-202ENST00000393452 IGLV6-57P01721 117 aa6.01□□□□□ -1.45
TDP1-202ENST00000393452 ACYP1P07311 99 aa6.01□□□□□ -1.45
TDP1-202ENST00000393452 NHLRC4P0CG21 123 aaPredicted RBP6.01□□□□□ -1.45
TDP1-202ENST00000393452 INAFM2P0DMQ5 153 aa6.01□□□□□ -1.45
TDP1-202ENST00000393452 HIGD2BQ4VC39 106 aa6.01□□□□□ -1.45
TDP1-202ENST00000393452 CAMK2N2Q96S95 79 aa6.01□□□□□ -1.45
TDP1-202ENST00000393452 SS18L2Q9UHA2 77 aa6.01□□□□□ -1.45
TDP1-202ENST00000393452 S100A7L2Q5SY68 101 aa6□□□□□ -1.45
TDP1-202ENST00000393452 F8WDY8 70 aa6□□□□□ -1.45
TDP1-202ENST00000393452 Q8N814 137 aa6□□□□□ -1.45
TDP1-202ENST00000393452 DNHD1Q96M86 4753 aa5.99□□□□□ -1.45
TDP1-202ENST00000393452 SNCGO76070 127 aa5.99□□□□□ -1.45
TDP1-202ENST00000393452 C6orf99Q4VX62 202 aa5.99□□□□□ -1.45
TDP1-202ENST00000393452 C9orf129Q5T035 196 aaKnown RBP5.99□□□□□ -1.45
TDP1-202ENST00000393452 Q6ZRU5 148 aa5.99□□□□□ -1.45
TDP1-202ENST00000393452 ORMDL1Q9P0S3 153 aa5.99□□□□□ -1.45
TDP1-202ENST00000393452 IGKV2D-24A0A075B6R9 120 aa5.99□□□□□ -1.45
TDP1-202ENST00000393452 RPL18AQ02543 176 aaKnown RBP5.99□□□□□ -1.45
TDP1-202ENST00000393452 SDIM1Q6ZPB5 146 aa5.99□□□□□ -1.45
TDP1-202ENST00000393452 XAGE1AQ9HD64 81 aa5.99□□□□□ -1.45
TDP1-202ENST00000393452 LINC00588Q9Y4M8 146 aa5.99□□□□□ -1.45
TDP1-202ENST00000393452 MGAM2Q2M2H8 2515 aa5.98□□□□□ -1.45
TDP1-202ENST00000393452 B5MCH6 92 aa5.98□□□□□ -1.45
TDP1-202ENST00000393452 SLPIP03973 132 aa5.98□□□□□ -1.45
TDP1-202ENST00000393452 MRAPQ8TCY5 172 aa5.98□□□□□ -1.45
TDP1-202ENST00000393452 NDUFC2-KCTD14E9PQ53 114 aa5.98□□□□□ -1.45
TDP1-202ENST00000393452 Q6Q795 121 aa5.98□□□□□ -1.45
TDP1-202ENST00000393452 LINC00575Q6W349 94 aa5.97□□□□□ -1.45
TDP1-202ENST00000393452 VPREB1P12018 145 aa5.96□□□□□ -1.45
TDP1-202ENST00000393452 NDUFV3P56181 108 aaKnown RBP5.96□□□□□ -1.45
TDP1-202ENST00000393452 TRBV10-3A0A0K0K1G6 114 aa5.96□□□□□ -1.46
TDP1-202ENST00000393452 GAGE2BQ13066 116 aa5.96□□□□□ -1.46
TDP1-202ENST00000393452 GAGE2EQ4V326 116 aa5.96□□□□□ -1.46
TDP1-202ENST00000393452 GAGE2DQ9UEU5 116 aa5.96□□□□□ -1.46
TDP1-202ENST00000393452 HUWE1Q7Z6Z7 4374 aaKnown RBP5.96□□□□□ -1.46
TDP1-202ENST00000393452 TMEM256-PLSCR3K7ERE1 68 aa5.95□□□□□ -1.46
TDP1-202ENST00000393452 TTC32Q5I0X7 151 aa5.95□□□□□ -1.46
TDP1-202ENST00000393452 UPK3BQ9BT76 320 aa5.95□□□□□ -1.46
TDP1-202ENST00000393452 C14orf132Q9NPU4 83 aa5.95□□□□□ -1.46
TDP1-202ENST00000393452 SYCNQ0VAF6 134 aa5.95□□□□□ -1.46
TDP1-202ENST00000393452 SMCR5Q8TEV8 140 aa5.95□□□□□ -1.46
TDP1-202ENST00000393452 TRAV23DV6A0A075B6W5 121 aa5.94□□□□□ -1.46
TDP1-202ENST00000393452 CCDC179H3BU77 68 aa5.94□□□□□ -1.46
TDP1-202ENST00000393452 Q6ZRP5 223 aa5.94□□□□□ -1.46
TDP1-202ENST00000393452 TRBV7-7A0A0K0K1E9 115 aa5.94□□□□□ -1.46
TDP1-202ENST00000393452 hADV29S1A0JD25 119 aa5.94□□□□□ -1.46
TDP1-202ENST00000393452 GAGE2AQ6NT46 116 aa5.94□□□□□ -1.46
TDP1-202ENST00000393452 JMJD7-PLA2G4BH0Y9G9 81 aa5.93□□□□□ -1.46
TDP1-202ENST00000393452 M0R378 163 aa5.93□□□□□ -1.46
TDP1-202ENST00000393452 LINC00643Q86TS7 51 aa5.93□□□□□ -1.46
TDP1-202ENST00000393452 TRBV7-6A0A0J9YX20 115 aa5.93□□□□□ -1.46
TDP1-202ENST00000393452 ZNF73O43830 326 aaPredicted RBP5.93□□□□□ -1.46
TDP1-202ENST00000393452 C4orf48Q5BLP8 95 aa5.93□□□□□ -1.46
TDP1-202ENST00000393452 DIRC1Q969H9 104 aa5.93□□□□□ -1.46
TDP1-202ENST00000393452 TLX1NBP0CAT3 122 aa5.92□□□□□ -1.46
TDP1-202ENST00000393452 IMUPQ9GZP8 106 aa5.92□□□□□ -1.46
TDP1-202ENST00000393452 USP17L23D6RBM5 183 aa5.91□□□□□ -1.46
TDP1-202ENST00000393452 ELOF1P60002 83 aaKnown RBP5.91□□□□□ -1.46
TDP1-202ENST00000393452 CASC10Q5T4H9 136 aa5.91□□□□□ -1.46
TDP1-202ENST00000393452 RMI2Q96E14 147 aa5.91□□□□□ -1.46
TDP1-202ENST00000393452 CCKP06307 115 aa5.9□□□□□ -1.46
TDP1-202ENST00000393452 STAB2Q8WWQ8 2551 aa5.9□□□□□ -1.47
TDP1-202ENST00000393452 H3BQ85 93 aa5.89□□□□□ -1.47
TDP1-202ENST00000393452 COX7BP24311 80 aa5.89□□□□□ -1.47
TDP1-202ENST00000393452 Q6ZQY7 126 aa5.89□□□□□ -1.47
TDP1-202ENST00000393452 LINC00846Q9NV44 126 aa5.89□□□□□ -1.47
TDP1-202ENST00000393452 PLA2G2DQ9UNK4 145 aa5.89□□□□□ -1.47
TDP1-202ENST00000393452 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.88□□□□□ -1.47
TDP1-202ENST00000393452 SMIM20Q8N5G0 67 aa5.88□□□□□ -1.47
TDP1-202ENST00000393452 LINC00528Q8N1L1 170 aa5.88□□□□□ -1.47
TDP1-202ENST00000393452 B9D2Q9BPU9 175 aa5.88□□□□□ -1.47
TDP1-202ENST00000393452 C5orf47Q569G3 176 aa5.87□□□□□ -1.47
TDP1-202ENST00000393452 SERTAD4-AS1Q5TG53 156 aa5.87□□□□□ -1.47
TDP1-202ENST00000393452 KCNQ1DNQ9H478 68 aa5.87□□□□□ -1.47
TDP1-202ENST00000393452 DNAH1Q9P2D7 4330 aa5.87□□□□□ -1.47
TDP1-202ENST00000393452 IGLV5-37A0A075B6J1 123 aa5.86□□□□□ -1.47
TDP1-202ENST00000393452 LOC110117498A0A087WWA1 95 aa5.86□□□□□ -1.47
TDP1-202ENST00000393452 RBM3P98179 157 aaKnown RBP5.86□□□□□ -1.47
TDP1-202ENST00000393452 KRTAP1-5Q9BYS1 174 aa5.86□□□□□ -1.47
TDP1-202ENST00000393452 COL7A1Q02388 2944 aa5.86□□□□□ -1.47
TDP1-202ENST00000393452 NKAPP1Q8N9T2 125 aa5.86□□□□□ -1.47
TDP1-202ENST00000393452 C7orf33Q8WU49 177 aa5.86□□□□□ -1.47
TDP1-202ENST00000393452 APLNQ9ULZ1 77 aa5.86□□□□□ -1.47
TDP1-202ENST00000393452 GHRHP01286 108 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms