RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 SEC61GP60059 68 aa12.28□□□□□ -0.44
ERCC2-201ENST00000391941 DEFB135Q30KP9 77 aa12.28□□□□□ -0.44
ERCC2-201ENST00000391941 JMJD7-PLA2G4BH0Y9G9 81 aa12.27□□□□□ -0.45
ERCC2-201ENST00000391941 XAGE1AQ9HD64 81 aa12.27□□□□□ -0.45
ERCC2-201ENST00000391941 TMEM256-PLSCR3K7ERE1 68 aa12.26□□□□□ -0.45
ERCC2-201ENST00000391941 REG3AQ06141 175 aa12.26□□□□□ -0.45
ERCC2-201ENST00000391941 SCXQ7RTU7 201 aa12.26□□□□□ -0.45
ERCC2-201ENST00000391941 X6R8D5 127 aa12.26□□□□□ -0.45
ERCC2-201ENST00000391941 C20orf197Q8N268 126 aa12.26□□□□□ -0.45
ERCC2-201ENST00000391941 LINC00612Q8N6U2 182 aa12.26□□□□□ -0.45
ERCC2-201ENST00000391941 DPH3Q96FX2 82 aa12.26□□□□□ -0.45
ERCC2-201ENST00000391941 LAMTOR3Q9UHA4 124 aa12.26□□□□□ -0.45
ERCC2-201ENST00000391941 PRO0255Q9UI72 69 aa12.25□□□□□ -0.45
ERCC2-201ENST00000391941 KRTAP10-3P60369 221 aa12.25□□□□□ -0.45
ERCC2-201ENST00000391941 HECTD1Q9ULT8 2610 aa12.25□□□□□ -0.45
ERCC2-201ENST00000391941 ZNF843Q8N446 348 aa12.24□□□□□ -0.45
ERCC2-201ENST00000391941 NDUFC2O95298 119 aa12.24□□□□□ -0.45
ERCC2-201ENST00000391941 HAMPP81172 84 aa12.24□□□□□ -0.45
ERCC2-201ENST00000391941 CD164L2Q6UWJ8 174 aa12.24□□□□□ -0.45
ERCC2-201ENST00000391941 C16orf95Q9H693 158 aa12.22□□□□□ -0.45
ERCC2-201ENST00000391941 C4orf26Q17RF5 130 aa12.22□□□□□ -0.45
ERCC2-201ENST00000391941 CELA1Q9UNI1 258 aa12.22□□□□□ -0.45
ERCC2-201ENST00000391941 COX17Q14061 63 aa12.21□□□□□ -0.45
ERCC2-201ENST00000391941 Q6ZQY7 126 aa12.21□□□□□ -0.45
ERCC2-201ENST00000391941 LINC00575Q6W349 94 aa12.2□□□□□ -0.46
ERCC2-201ENST00000391941 TRAV10A0A0B4J240 114 aa12.19□□□□□ -0.46
ERCC2-201ENST00000391941 KLK12Q9UKR0 248 aa12.19□□□□□ -0.46
ERCC2-201ENST00000391941 CYSRT1A8MQ03 144 aa12.19□□□□□ -0.46
ERCC2-201ENST00000391941 KRTAP1-1Q07627 177 aa12.19□□□□□ -0.46
ERCC2-201ENST00000391941 SPAG11BQ08648 103 aa12.19□□□□□ -0.46
ERCC2-201ENST00000391941 UBL5Q9BZL1 73 aa12.19□□□□□ -0.46
ERCC2-201ENST00000391941 IGHV4-28A0A0C4DH34 117 aa12.18□□□□□ -0.46
ERCC2-201ENST00000391941 TMEM258P61165 79 aa12.18□□□□□ -0.46
ERCC2-201ENST00000391941 SNURFQ9Y675 71 aa12.18□□□□□ -0.46
ERCC2-201ENST00000391941 RBM3P98179 157 aaKnown RBP12.18□□□□□ -0.46
ERCC2-201ENST00000391941 Q6ZQT0 140 aa12.17□□□□□ -0.46
ERCC2-201ENST00000391941 ATP5EP2Q5VTU8 51 aa12.16□□□□□ -0.46
ERCC2-201ENST00000391941 RPS28P62857 69 aaKnown RBP12.16□□□□□ -0.46
ERCC2-201ENST00000391941 LYPD5Q6UWN5 251 aa12.16□□□□□ -0.46
ERCC2-201ENST00000391941 TRBV10-3A0A0K0K1G6 114 aa12.15□□□□□ -0.46
ERCC2-201ENST00000391941 HRCT1Q6UXD1 115 aa12.15□□□□□ -0.46
ERCC2-201ENST00000391941 HIGD2BQ4VC39 106 aa12.14□□□□□ -0.47
ERCC2-201ENST00000391941 LINC01547P58512 204 aaPredicted RBP12.13□□□□□ -0.47
ERCC2-201ENST00000391941 Q6ZVQ6 151 aa12.12□□□□□ -0.47
ERCC2-201ENST00000391941 DAD1P61803 113 aa12.12□□□□□ -0.47
ERCC2-201ENST00000391941 Q8N9L7 120 aa12.12□□□□□ -0.47
ERCC2-201ENST00000391941 ZNF561-AS1K7EIQ3 104 aa12.11□□□□□ -0.47
ERCC2-201ENST00000391941 RMI2Q96E14 147 aa12.1□□□□□ -0.47
ERCC2-201ENST00000391941 LYRM9A8MSI8 78 aa12.1□□□□□ -0.47
ERCC2-201ENST00000391941 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.1□□□□□ -0.47
ERCC2-201ENST00000391941 MRAPQ8TCY5 172 aa12.1□□□□□ -0.47
ERCC2-201ENST00000391941 C6orf48Q9UBA6 75 aa12.08□□□□□ -0.47
ERCC2-201ENST00000391941 IGLV6-57P01721 117 aa12.08□□□□□ -0.48
ERCC2-201ENST00000391941 TENM3Q9P273 2699 aa12.08□□□□□ -0.48
ERCC2-201ENST00000391941 BAHCC1Q9P281 2608 aa12.08□□□□□ -0.48
ERCC2-201ENST00000391941 F8P00451 2351 aa12.07□□□□□ -0.48
ERCC2-201ENST00000391941 LOC110117498A0A087WWA1 95 aa12.07□□□□□ -0.48
ERCC2-201ENST00000391941 Q5XG85 94 aa12.07□□□□□ -0.48
ERCC2-201ENST00000391941 C1orf43Q9BWL3 253 aa12.07□□□□□ -0.48
ERCC2-201ENST00000391941 A0A0J9YWU9 116 aa12.05□□□□□ -0.48
ERCC2-201ENST00000391941 IGHV4-30-4P0DP06 118 aa12.05□□□□□ -0.48
ERCC2-201ENST00000391941 TM2D3Q9BRN9 247 aa12.05□□□□□ -0.48
ERCC2-201ENST00000391941 MUC7Q8TAX7 377 aa12.04□□□□□ -0.48
ERCC2-201ENST00000391941 ANK2Q01484 3957 aa12.03□□□□□ -0.48
ERCC2-201ENST00000391941 H7BZZ5 65 aa12.02□□□□□ -0.48
ERCC2-201ENST00000391941 FBN1P35555 2871 aaKnown RBP12.01□□□□□ -0.49
ERCC2-201ENST00000391941 NSD1Q96L73 2696 aaPredicted RBP12.01□□□□□ -0.49
ERCC2-201ENST00000391941 ZNF73O43830 326 aaPredicted RBP12.01□□□□□ -0.49
ERCC2-201ENST00000391941 DIRC1Q969H9 104 aa12.01□□□□□ -0.49
ERCC2-201ENST00000391941 FAM236DA0A1B0GTK5 79 aa12□□□□□ -0.49
ERCC2-201ENST00000391941 FAM236CP0DP71 79 aa12□□□□□ -0.49
ERCC2-201ENST00000391941 WFDC10BQ8IUB3 73 aa12□□□□□ -0.49
ERCC2-201ENST00000391941 LELP1Q5T871 98 aa12□□□□□ -0.49
ERCC2-201ENST00000391941 PRR34Q9NV39 138 aa11.99□□□□□ -0.49
ERCC2-201ENST00000391941 F8WEM9 126 aa11.98□□□□□ -0.49
ERCC2-201ENST00000391941 Q8NAQ8 132 aa11.98□□□□□ -0.49
ERCC2-201ENST00000391941 DEFB105AQ8NG35 78 aa11.98□□□□□ -0.49
ERCC2-201ENST00000391941 RETNQ9HD89 108 aa11.98□□□□□ -0.49
ERCC2-201ENST00000391941 TRAV7A0A075B6U4 112 aa11.97□□□□□ -0.49
ERCC2-201ENST00000391941 NDUFC2-KCTD14E9PQ53 114 aa11.97□□□□□ -0.49
ERCC2-201ENST00000391941 C3orf84H3BNL1 204 aa11.97□□□□□ -0.49
ERCC2-201ENST00000391941 C9orf66Q5T8R8 295 aa11.97□□□□□ -0.49
ERCC2-201ENST00000391941 COX7BP24311 80 aa11.96□□□□□ -0.49
ERCC2-201ENST00000391941 BPY2O14599 106 aa11.96□□□□□ -0.5
ERCC2-201ENST00000391941 CAMK2N2Q96S95 79 aa11.96□□□□□ -0.5
ERCC2-201ENST00000391941 Q6ZRU5 148 aa11.95□□□□□ -0.5
ERCC2-201ENST00000391941 FLNBO75369 2602 aaKnown RBP11.95□□□□□ -0.5
ERCC2-201ENST00000391941 GVQW2A0A096LPI5 108 aaPredicted RBP11.94□□□□□ -0.5
ERCC2-201ENST00000391941 APOC4P55056 127 aa11.94□□□□□ -0.5
ERCC2-201ENST00000391941 PDE6GP18545 87 aa11.94□□□□□ -0.5
ERCC2-201ENST00000391941 MAST4O15021 2626 aa11.93□□□□□ -0.5
ERCC2-201ENST00000391941 TRBV7-4A0A0J9YYF1 115 aa11.93□□□□□ -0.5
ERCC2-201ENST00000391941 V9GYY9 64 aa11.93□□□□□ -0.5
ERCC2-201ENST00000391941 SPART-AS1P0CW21 52 aa11.93□□□□□ -0.5
ERCC2-201ENST00000391941 CXCL6P80162 114 aa11.92□□□□□ -0.5
ERCC2-201ENST00000391941 CSMD3Q7Z407 3707 aa11.92□□□□□ -0.5
ERCC2-201ENST00000391941 ELOF1P60002 83 aaKnown RBP11.92□□□□□ -0.5
ERCC2-201ENST00000391941 LINC00474Q9P2X8 69 aa11.92□□□□□ -0.5
ERCC2-201ENST00000391941 NOTCH1P46531 2555 aa11.91□□□□□ -0.5
ERCC2-201ENST00000391941 VPREB1P12018 145 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms