RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 CRYGAP11844 174 aa10.32□□□□□ -0.76
LRRK1-201ENST00000388948 KIF25-AS1Q9Y6Z4 181 aa10.32□□□□□ -0.76
LRRK1-201ENST00000388948 GOLGB1Q14789 3259 aaKnown RBP10.31□□□□□ -0.76
LRRK1-201ENST00000388948 H0Y9P7 68 aa10.31□□□□□ -0.76
LRRK1-201ENST00000388948 H3BNG1 76 aa10.31□□□□□ -0.76
LRRK1-201ENST00000388948 LINC00167Q96N53 147 aa10.31□□□□□ -0.76
LRRK1-201ENST00000388948 hDV103S1A0JD37 113 aa10.3□□□□□ -0.76
LRRK1-201ENST00000388948 PHF5AQ7RTV0 110 aaKnown RBP10.3□□□□□ -0.76
LRRK1-201ENST00000388948 A0A0U1RQV1 116 aa10.3□□□□□ -0.76
LRRK1-201ENST00000388948 COX8CQ7Z4L0 72 aa10.29□□□□□ -0.76
LRRK1-201ENST00000388948 MGAM2Q2M2H8 2515 aa10.29□□□□□ -0.76
LRRK1-201ENST00000388948 LINC00588Q9Y4M8 146 aa10.28□□□□□ -0.76
LRRK1-201ENST00000388948 YPEL4Q96NS1 127 aa10.27□□□□□ -0.76
LRRK1-201ENST00000388948 RPL37AP61513 92 aaKnown RBP10.26□□□□□ -0.77
LRRK1-201ENST00000388948 C7orf65Q6ZTY9 151 aa10.26□□□□□ -0.77
LRRK1-201ENST00000388948 KIAA0087Q14695 138 aa10.26□□□□□ -0.77
LRRK1-201ENST00000388948 Q8N3U1 123 aa10.25□□□□□ -0.77
LRRK1-201ENST00000388948 HECTD1Q9ULT8 2610 aa10.25□□□□□ -0.77
LRRK1-201ENST00000388948 C6orf48Q9UBA6 75 aa10.25□□□□□ -0.77
LRRK1-201ENST00000388948 TRAV7A0A075B6U4 112 aa10.25□□□□□ -0.77
LRRK1-201ENST00000388948 Q8NAQ8 132 aa10.23□□□□□ -0.77
LRRK1-201ENST00000388948 COX7CP15954 63 aa10.23□□□□□ -0.77
LRRK1-201ENST00000388948 URB1-AS1Q96HZ7 61 aa10.22□□□□□ -0.77
LRRK1-201ENST00000388948 IGHV3OR16-9A0A0B4J2B5 98 aa10.22□□□□□ -0.77
LRRK1-201ENST00000388948 A0A087WVE0 104 aa10.21□□□□□ -0.77
LRRK1-201ENST00000388948 COX6B2Q6YFQ2 88 aa10.21□□□□□ -0.77
LRRK1-201ENST00000388948 PCSK5Q92824 1860 aa10.19□□□□□ -0.78
LRRK1-201ENST00000388948 ATP11AUNQ6ZP68 121 aa10.19□□□□□ -0.78
LRRK1-201ENST00000388948 TRBV7-7A0A0K0K1E9 115 aa10.19□□□□□ -0.78
LRRK1-201ENST00000388948 SPATA3Q8NHX4 192 aa10.19□□□□□ -0.78
LRRK1-201ENST00000388948 EPM2AB3EWF7 344 aa10.18□□□□□ -0.78
LRRK1-201ENST00000388948 K7EIL1 84 aa10.18□□□□□ -0.78
LRRK1-201ENST00000388948 LINC00313P59037 77 aa10.17□□□□□ -0.78
LRRK1-201ENST00000388948 Q8NBF4 154 aa10.17□□□□□ -0.78
LRRK1-201ENST00000388948 BPTFQ12830 3046 aa10.16□□□□□ -0.78
LRRK1-201ENST00000388948 MAST4O15021 2626 aa10.16□□□□□ -0.78
LRRK1-201ENST00000388948 C1orf64Q8NEQ6 169 aa10.16□□□□□ -0.78
LRRK1-201ENST00000388948 SOSTDC1Q6X4U4 206 aa10.14□□□□□ -0.79
LRRK1-201ENST00000388948 Q96NJ1 140 aa10.13□□□□□ -0.79
LRRK1-201ENST00000388948 ATRQ13535 2644 aa10.13□□□□□ -0.79
LRRK1-201ENST00000388948 FAM19A4Q96LR4 140 aa10.13□□□□□ -0.79
LRRK1-201ENST00000388948 IGLV5-39A0A0G2JS06 123 aa10.12□□□□□ -0.79
LRRK1-201ENST00000388948 A0A096LNJ9 63 aa10.12□□□□□ -0.79
LRRK1-201ENST00000388948 KRTAP10-11P60412 298 aa10.12□□□□□ -0.79
LRRK1-201ENST00000388948 BCE1O60756 84 aa10.12□□□□□ -0.79
LRRK1-201ENST00000388948 LINC00310P59036 64 aa10.12□□□□□ -0.79
LRRK1-201ENST00000388948 DNAH10OSP0CZ25 163 aa10.11□□□□□ -0.79
LRRK1-201ENST00000388948 CDIP1Q9H305 208 aa10.11□□□□□ -0.79
LRRK1-201ENST00000388948 CCDC179H3BU77 68 aa10.11□□□□□ -0.79
LRRK1-201ENST00000388948 SMR3BP02814 79 aaPredicted RBP10.1□□□□□ -0.79
LRRK1-201ENST00000388948 Q9UF83 564 aa10.09□□□□□ -0.79
LRRK1-201ENST00000388948 Q6ZRX8 168 aa10.09□□□□□ -0.79
LRRK1-201ENST00000388948 PRRC2CQ9Y520 2896 aaKnown RBP10.09□□□□□ -0.79
LRRK1-201ENST00000388948 LINC00476Q8WZB0 136 aa10.09□□□□□ -0.79
LRRK1-201ENST00000388948 GVQW2A0A096LPI5 108 aaPredicted RBP10.08□□□□□ -0.8
LRRK1-201ENST00000388948 TP53AIP1Q9HCN2 124 aa10.08□□□□□ -0.8
LRRK1-201ENST00000388948 LINC00846Q9NV44 126 aa10.07□□□□□ -0.8
LRRK1-201ENST00000388948 SMIM26A0A096LP01 95 aa10.07□□□□□ -0.8
LRRK1-201ENST00000388948 SMIM29Q86T20 159 aa10.06□□□□□ -0.8
LRRK1-201ENST00000388948 PSPHP1O15172 72 aa10.06□□□□□ -0.8
LRRK1-201ENST00000388948 ELOF1P60002 83 aaKnown RBP10.05□□□□□ -0.8
LRRK1-201ENST00000388948 ST20-AS1Q8NBB2 130 aa10.05□□□□□ -0.8
LRRK1-201ENST00000388948 TMEM254Q8TBM7 123 aa10.05□□□□□ -0.8
LRRK1-201ENST00000388948 CXCL6P80162 114 aa10.04□□□□□ -0.8
LRRK1-201ENST00000388948 ACYP2P14621 99 aa10.03□□□□□ -0.8
LRRK1-201ENST00000388948 FAM168BA1KXE4 195 aa10.03□□□□□ -0.8
LRRK1-201ENST00000388948 A0A1B0GU69 56 aa10.01□□□□□ -0.81
LRRK1-201ENST00000388948 PMAIP1Q13794 54 aa10□□□□□ -0.81
LRRK1-201ENST00000388948 LINC00304Q8N9R0 145 aa10□□□□□ -0.81
LRRK1-201ENST00000388948 LINC00336Q6ZUF6 198 aa9.99□□□□□ -0.81
LRRK1-201ENST00000388948 HELZ2Q9BYK8 2649 aaKnown RBP9.98□□□□□ -0.81
LRRK1-201ENST00000388948 IGLV5-45A0A087WSX0 123 aa9.98□□□□□ -0.81
LRRK1-201ENST00000388948 C19orf73Q9NVV2 129 aa9.97□□□□□ -0.81
LRRK1-201ENST00000388948 TM2D3Q9BRN9 247 aa9.96□□□□□ -0.81
LRRK1-201ENST00000388948 A0A087WTM6 91 aa9.96□□□□□ -0.82
LRRK1-201ENST00000388948 C9orf92A6NGG3 77 aa9.95□□□□□ -0.82
LRRK1-201ENST00000388948 KRTAP10-3P60369 221 aa9.94□□□□□ -0.82
LRRK1-201ENST00000388948 A0A1B0GW54 56 aa9.93□□□□□ -0.82
LRRK1-201ENST00000388948 CSNK1G2-AS1Q8NCQ2 148 aa9.93□□□□□ -0.82
LRRK1-201ENST00000388948 LINC01546A6NGU7 62 aa9.92□□□□□ -0.82
LRRK1-201ENST00000388948 IGLV8-61A0A075B6I0 122 aa9.92□□□□□ -0.82
LRRK1-201ENST00000388948 SERTAD4-AS1Q5TG53 156 aa9.92□□□□□ -0.82
LRRK1-201ENST00000388948 SPAG11AQ6PDA7 123 aa9.91□□□□□ -0.82
LRRK1-201ENST00000388948 TRAV22A0A0B4J277 110 aa9.9□□□□□ -0.82
LRRK1-201ENST00000388948 ZNF861PO60384 105 aa9.9□□□□□ -0.82
LRRK1-201ENST00000388948 C8orf87E5RJ46 101 aa9.9□□□□□ -0.83
LRRK1-201ENST00000388948 FAM218AQ96MZ4 157 aa9.89□□□□□ -0.83
LRRK1-201ENST00000388948 VPREB1P12018 145 aa9.89□□□□□ -0.83
LRRK1-201ENST00000388948 C1orf195Q5TG92 126 aa9.89□□□□□ -0.83
LRRK1-201ENST00000388948 FLNAP21333 2647 aaKnown RBP9.87□□□□□ -0.83
LRRK1-201ENST00000388948 OBSCN-AS1Q96MR7 158 aa9.87□□□□□ -0.83
LRRK1-201ENST00000388948 CFAP46Q8IYW2 2715 aa9.87□□□□□ -0.83
LRRK1-201ENST00000388948 A0A096LNT2 108 aa9.87□□□□□ -0.83
LRRK1-201ENST00000388948 ITPR3Q14573 2671 aa9.86□□□□□ -0.83
LRRK1-201ENST00000388948 Q6ZQT0 140 aa9.86□□□□□ -0.83
LRRK1-201ENST00000388948 IGLV1-50A0A075B6I6 118 aa9.85□□□□□ -0.83
LRRK1-201ENST00000388948 CEP350Q5VT06 3117 aa9.85□□□□□ -0.83
LRRK1-201ENST00000388948 DSCR10P59022 87 aa9.84□□□□□ -0.83
LRRK1-201ENST00000388948 LINC00528Q8N1L1 170 aa9.84□□□□□ -0.83
LRRK1-201ENST00000388948 TRBV7-4A0A0J9YYF1 115 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms