RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 TP73-AS1Q9UF72 201 aa15.76■□□□□ 0.11
NPHP3-202ENST00000383282 S100A2P29034 98 aa15.75■□□□□ 0.11
NPHP3-202ENST00000383282 SYS1-DBNDD2H3BUS1 97 aa15.74■□□□□ 0.11
NPHP3-202ENST00000383282 DPM2O94777 84 aa15.74■□□□□ 0.11
NPHP3-202ENST00000383282 MRPL55Q7Z7F7 128 aaKnown RBP15.74■□□□□ 0.11
NPHP3-202ENST00000383282 PMCHL2Q9BQD1 86 aa15.74■□□□□ 0.11
NPHP3-202ENST00000383282 RPL28P46779 137 aaKnown RBP15.72■□□□□ 0.11
NPHP3-202ENST00000383282 KRTDAPP60985 99 aa15.72■□□□□ 0.11
NPHP3-202ENST00000383282 IGKCP01834 107 aa15.71■□□□□ 0.11
NPHP3-202ENST00000383282 IGLV5-39A0A0G2JS06 123 aa15.7■□□□□ 0.1
NPHP3-202ENST00000383282 TMEM223A0PJW6 202 aa15.7■□□□□ 0.1
NPHP3-202ENST00000383282 PET117Q6UWS5 81 aa15.7■□□□□ 0.1
NPHP3-202ENST00000383282 HIST3H2BBQ8N257 126 aa15.7■□□□□ 0.1
NPHP3-202ENST00000383282 BCE1O60756 84 aa15.69■□□□□ 0.1
NPHP3-202ENST00000383282 C3orf79P0CE67 100 aa15.69■□□□□ 0.1
NPHP3-202ENST00000383282 HERVK_113P61574 105 aa15.67■□□□□ 0.1
NPHP3-202ENST00000383282 C20orf202A1L168 122 aa15.66■□□□□ 0.1
NPHP3-202ENST00000383282 SNRPEP62304 92 aaKnown RBP15.65■□□□□ 0.1
NPHP3-202ENST00000383282 LINC01545Q5VT33 79 aa15.65■□□□□ 0.1
NPHP3-202ENST00000383282 TSPAN13O95857 204 aa15.64■□□□□ 0.09
NPHP3-202ENST00000383282 LINC00167Q96N53 147 aa15.64■□□□□ 0.09
NPHP3-202ENST00000383282 CRYGAP11844 174 aa15.63■□□□□ 0.09
NPHP3-202ENST00000383282 HIST1H2BLQ99880 126 aa15.63■□□□□ 0.09
NPHP3-202ENST00000383282 RPL37AP8A6NKH3 93 aa15.62■□□□□ 0.09
NPHP3-202ENST00000383282 SFTA2Q6UW10 78 aa15.62■□□□□ 0.09
NPHP3-202ENST00000383282 TYMSOSQ8TAI1 123 aa15.61■□□□□ 0.09
NPHP3-202ENST00000383282 A0A087X002 238 aa15.6■□□□□ 0.09
NPHP3-202ENST00000383282 GAGE10A6NGK3 116 aa15.59■□□□□ 0.09
NPHP3-202ENST00000383282 NKAPP1Q8N9T2 125 aa15.59■□□□□ 0.09
NPHP3-202ENST00000383282 PLEKHB2Q96CS7 222 aa15.59■□□□□ 0.09
NPHP3-202ENST00000383282 C5orf52A6NGY3 159 aa15.58■□□□□ 0.08
NPHP3-202ENST00000383282 LEPROTO15243 131 aa15.57■□□□□ 0.08
NPHP3-202ENST00000383282 IGLV5-37A0A075B6J1 123 aa15.56■□□□□ 0.08
NPHP3-202ENST00000383282 UBE2AP49459 152 aa15.56■□□□□ 0.08
NPHP3-202ENST00000383282 AKR1D1P51857 326 aa15.56■□□□□ 0.08
NPHP3-202ENST00000383282 ZNF625Q96I27 306 aaPredicted RBP15.55■□□□□ 0.08
NPHP3-202ENST00000383282 A0A0U1RQV1 116 aa15.54■□□□□ 0.08
NPHP3-202ENST00000383282 LGALS3P17931 250 aaKnown RBP15.54■□□□□ 0.08
NPHP3-202ENST00000383282 MUC2Q02817 5179 aa15.54■□□□□ 0.08
NPHP3-202ENST00000383282 NDUFA12Q9UI09 145 aa15.53■□□□□ 0.08
NPHP3-202ENST00000383282 TMA7Q9Y2S6 64 aaKnown RBP15.53■□□□□ 0.08
NPHP3-202ENST00000383282 MYMXA0A1B0GTQ4 84 aa15.52■□□□□ 0.08
NPHP3-202ENST00000383282 J3QQQ9 107 aa15.52■□□□□ 0.08
NPHP3-202ENST00000383282 PFN2P35080 140 aa15.52■□□□□ 0.08
NPHP3-202ENST00000383282 ERG28Q9UKR5 140 aa15.52■□□□□ 0.08
NPHP3-202ENST00000383282 E9PLD3 99 aa15.51■□□□□ 0.07
NPHP3-202ENST00000383282 HERV-K104P63124 156 aa15.51■□□□□ 0.07
NPHP3-202ENST00000383282 ANAPC11Q9NYG5 84 aa15.5■□□□□ 0.07
NPHP3-202ENST00000383282 TSPEAR-AS2P59090 65 aa15.49■□□□□ 0.07
NPHP3-202ENST00000383282 COX17Q14061 63 aa15.49■□□□□ 0.07
NPHP3-202ENST00000383282 MEIG1Q5JSS6 88 aa15.49■□□□□ 0.07
NPHP3-202ENST00000383282 KRTAP13-1Q8IUC0 172 aa15.49■□□□□ 0.07
NPHP3-202ENST00000383282 ATOH7Q8N100 152 aa15.49■□□□□ 0.07
NPHP3-202ENST00000383282 IGKV2-28A0A075B6P5 120 aa15.48■□□□□ 0.07
NPHP3-202ENST00000383282 IGKV2D-28P01615 120 aa15.48■□□□□ 0.07
NPHP3-202ENST00000383282 NMUP48645 174 aa15.48■□□□□ 0.07
NPHP3-202ENST00000383282 LINC00158P58513 81 aa15.46■□□□□ 0.07
NPHP3-202ENST00000383282 FAM229BQ4G0N7 80 aa15.46■□□□□ 0.07
NPHP3-202ENST00000383282 LINC00587B1AMM8 73 aa15.45■□□□□ 0.06
NPHP3-202ENST00000383282 KRTAP13-2Q52LG2 175 aa15.44■□□□□ 0.06
NPHP3-202ENST00000383282 A0A0U1RRA0 63 aa15.43■□□□□ 0.06
NPHP3-202ENST00000383282 SCGB1D1O95968 90 aa15.43■□□□□ 0.06
NPHP3-202ENST00000383282 LINC00304Q8N9R0 145 aa15.42■□□□□ 0.06
NPHP3-202ENST00000383282 IGKV2D-26A0A0A0MRZ7 120 aa15.41■□□□□ 0.06
NPHP3-202ENST00000383282 SMIM13P0DJ93 91 aa15.41■□□□□ 0.06
NPHP3-202ENST00000383282 RPL24P83731 157 aaKnown RBP15.41■□□□□ 0.06
NPHP3-202ENST00000383282 FAM19A1Q7Z5A9 133 aa15.41■□□□□ 0.06
NPHP3-202ENST00000383282 HSBP1L1C9JCN9 74 aa15.4■□□□□ 0.06
NPHP3-202ENST00000383282 PRLHP81277 87 aa15.4■□□□□ 0.06
NPHP3-202ENST00000383282 VPREB1P12018 145 aa15.39■□□□□ 0.05
NPHP3-202ENST00000383282 SND1-IT1Q9HBX3 110 aa15.39■□□□□ 0.05
NPHP3-202ENST00000383282 TMEM126AQ9H061 195 aa15.38■□□□□ 0.05
NPHP3-202ENST00000383282 ANKRD39Q53RE8 183 aa15.37■□□□□ 0.05
NPHP3-202ENST00000383282 RETNLBQ9BQ08 111 aa15.37■□□□□ 0.05
NPHP3-202ENST00000383282 ZNF815PA8K554 130 aa15.36■□□□□ 0.05
NPHP3-202ENST00000383282 TMEM238C9JI98 176 aa15.35■□□□□ 0.05
NPHP3-202ENST00000383282 MIR7-3HGQ8N6C7 128 aa15.34■□□□□ 0.05
NPHP3-202ENST00000383282 CTAG1AP78358 180 aa15.33■□□□□ 0.04
NPHP3-202ENST00000383282 A0A0J9YXY3 114 aa15.32■□□□□ 0.04
NPHP3-202ENST00000383282 M0R378 163 aa15.32■□□□□ 0.04
NPHP3-202ENST00000383282 TTTY13Q9BZ97 58 aa15.31■□□□□ 0.04
NPHP3-202ENST00000383282 CDIP1Q9H305 208 aa15.3■□□□□ 0.04
NPHP3-202ENST00000383282 TPRXLQ17RH7 258 aa15.28■□□□□ 0.04
NPHP3-202ENST00000383282 SCGB1D4Q6XE38 83 aa15.28■□□□□ 0.04
NPHP3-202ENST00000383282 DAND5Q8N907 189 aa15.28■□□□□ 0.04
NPHP3-202ENST00000383282 MIEN1Q9BRT3 115 aa15.28■□□□□ 0.04
NPHP3-202ENST00000383282 IGLV7-46A0A075B6I9 117 aa15.26■□□□□ 0.03
NPHP3-202ENST00000383282 HIGD2AQ9BW72 106 aa15.26■□□□□ 0.03
NPHP3-202ENST00000383282 JOSD1Q15040 202 aaPredicted RBP15.25■□□□□ 0.03
NPHP3-202ENST00000383282 BOD1L2Q8IYS8 172 aa15.25■□□□□ 0.03
NPHP3-202ENST00000383282 Q8NDZ9 215 aa15.25■□□□□ 0.03
NPHP3-202ENST00000383282 TIMM17BO60830 172 aa15.24■□□□□ 0.03
NPHP3-202ENST00000383282 PCP2Q8IVA1 136 aa15.24■□□□□ 0.03
NPHP3-202ENST00000383282 C3orf22Q8N5N4 141 aa15.22■□□□□ 0.03
NPHP3-202ENST00000383282 NPC2P61916 151 aa15.21■□□□□ 0.03
NPHP3-202ENST00000383282 SPAG11AQ6PDA7 123 aa15.21■□□□□ 0.03
NPHP3-202ENST00000383282 FAT4Q6V0I7 4981 aa15.21■□□□□ 0.02
NPHP3-202ENST00000383282 ADAMTSL4-AS1Q5T5F5 129 aa15.2■□□□□ 0.02
NPHP3-202ENST00000383282 VAMP8Q9BV40 100 aa15.2■□□□□ 0.02
NPHP3-202ENST00000383282 ZNF706Q9Y5V0 76 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms