RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 CRIP3Q6Q6R5 217 aa8.63□□□□□ -1.03
CHD3-203ENST00000380358 ZFYVE26Q68DK2 2539 aa8.61□□□□□ -1.03
CHD3-203ENST00000380358 Q6ZRP5 223 aa8.61□□□□□ -1.03
CHD3-203ENST00000380358 C16orf95Q9H693 158 aa8.61□□□□□ -1.03
CHD3-203ENST00000380358 A0A1W2PPR1 153 aa8.6□□□□□ -1.03
CHD3-203ENST00000380358 LINC00476Q8WZB0 136 aa8.6□□□□□ -1.03
CHD3-203ENST00000380358 FAM168BA1KXE4 195 aa8.6□□□□□ -1.03
CHD3-203ENST00000380358 C4orf26Q17RF5 130 aa8.6□□□□□ -1.03
CHD3-203ENST00000380358 PTPRBP23467 1997 aa8.59□□□□□ -1.03
CHD3-203ENST00000380358 DSCR10P59022 87 aa8.59□□□□□ -1.04
CHD3-203ENST00000380358 LINC01600Q96MT4 127 aa8.59□□□□□ -1.04
CHD3-203ENST00000380358 JMJD1CQ15652 2540 aa8.58□□□□□ -1.04
CHD3-203ENST00000380358 C8orf87E5RJ46 101 aa8.57□□□□□ -1.04
CHD3-203ENST00000380358 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
CHD3-203ENST00000380358 OBSCN-AS1Q96MR7 158 aa8.57□□□□□ -1.04
CHD3-203ENST00000380358 A0A1B0GUV1 79 aa8.57□□□□□ -1.04
CHD3-203ENST00000380358 ZNF575Q86XF7 245 aa8.56□□□□□ -1.04
CHD3-203ENST00000380358 CPAMD8Q8IZJ3 1885 aa8.56□□□□□ -1.04
CHD3-203ENST00000380358 AMELXQ99217 191 aa8.56□□□□□ -1.04
CHD3-203ENST00000380358 NBDYA0A0U1RRE5 68 aa8.55□□□□□ -1.04
CHD3-203ENST00000380358 FN1P02751 2386 aaKnown RBP8.55□□□□□ -1.04
CHD3-203ENST00000380358 IGLV5-37A0A075B6J1 123 aa8.55□□□□□ -1.04
CHD3-203ENST00000380358 K7EQZ3 153 aa8.55□□□□□ -1.04
CHD3-203ENST00000380358 KRTAP24-1Q3LI83 254 aa8.55□□□□□ -1.04
CHD3-203ENST00000380358 NAV2Q8IVL1 2488 aa8.55□□□□□ -1.04
CHD3-203ENST00000380358 KIF25-AS1Q9Y6Z4 181 aa8.55□□□□□ -1.04
CHD3-203ENST00000380358 ACANP16112 2415 aa8.54□□□□□ -1.04
CHD3-203ENST00000380358 Q8NBF4 154 aa8.54□□□□□ -1.04
CHD3-203ENST00000380358 DNAH10OSP0CZ25 163 aa8.54□□□□□ -1.04
CHD3-203ENST00000380358 ANAPC11Q9NYG5 84 aa8.53□□□□□ -1.04
CHD3-203ENST00000380358 M0R2T5 61 aa8.53□□□□□ -1.04
CHD3-203ENST00000380358 URB1-AS1Q96HZ7 61 aa8.53□□□□□ -1.04
CHD3-203ENST00000380358 TP53AIP1Q9HCN2 124 aa8.53□□□□□ -1.04
CHD3-203ENST00000380358 TLN2Q9Y4G6 2542 aa8.53□□□□□ -1.04
CHD3-203ENST00000380358 TRAV22A0A0B4J277 110 aa8.52□□□□□ -1.05
CHD3-203ENST00000380358 LINC00588Q9Y4M8 146 aa8.51□□□□□ -1.05
CHD3-203ENST00000380358 CXCL6P80162 114 aa8.51□□□□□ -1.05
CHD3-203ENST00000380358 A0A0G2JQZ4 141 aa8.5□□□□□ -1.05
CHD3-203ENST00000380358 A0A1W2PNN7 141 aa8.5□□□□□ -1.05
CHD3-203ENST00000380358 WWC2-AS2Q96NR7 200 aa8.5□□□□□ -1.05
CHD3-203ENST00000380358 F8WDY8 70 aa8.5□□□□□ -1.05
CHD3-203ENST00000380358 TM2D3Q9BRN9 247 aa8.48□□□□□ -1.05
CHD3-203ENST00000380358 CSNK1G2-AS1Q8NCQ2 148 aa8.48□□□□□ -1.05
CHD3-203ENST00000380358 CNFNQ9BYD5 112 aa8.47□□□□□ -1.05
CHD3-203ENST00000380358 FAM218AQ96MZ4 157 aa8.47□□□□□ -1.05
CHD3-203ENST00000380358 BCE1O60756 84 aa8.45□□□□□ -1.06
CHD3-203ENST00000380358 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
CHD3-203ENST00000380358 YPEL4Q96NS1 127 aa8.45□□□□□ -1.06
CHD3-203ENST00000380358 Q6ZQT0 140 aa8.44□□□□□ -1.06
CHD3-203ENST00000380358 IGLV5-39A0A0G2JS06 123 aa8.44□□□□□ -1.06
CHD3-203ENST00000380358 Q6ZRX8 168 aa8.44□□□□□ -1.06
CHD3-203ENST00000380358 VPREB1P12018 145 aa8.43□□□□□ -1.06
CHD3-203ENST00000380358 WDR87Q6ZQQ6 2873 aa8.43□□□□□ -1.06
CHD3-203ENST00000380358 IGLV5-48A0A075B6I7 105 aa8.43□□□□□ -1.06
CHD3-203ENST00000380358 COL27A1Q8IZC6 1860 aaPredicted RBP8.42□□□□□ -1.06
CHD3-203ENST00000380358 TRBV7-4A0A0J9YYF1 115 aa8.42□□□□□ -1.06
CHD3-203ENST00000380358 IGF2RP11717 2491 aa8.42□□□□□ -1.06
CHD3-203ENST00000380358 RBM12B-AS1Q9P1G2 102 aa8.42□□□□□ -1.06
CHD3-203ENST00000380358 ELOF1P60002 83 aaKnown RBP8.42□□□□□ -1.06
CHD3-203ENST00000380358 LINC00310P59036 64 aa8.42□□□□□ -1.06
CHD3-203ENST00000380358 LTBP2Q14767 1821 aa8.41□□□□□ -1.06
CHD3-203ENST00000380358 Q8N1X5 172 aa8.41□□□□□ -1.06
CHD3-203ENST00000380358 C11orf72Q8NBR9 251 aa8.41□□□□□ -1.06
CHD3-203ENST00000380358 COA5Q86WW8 74 aa8.41□□□□□ -1.06
CHD3-203ENST00000380358 IGLV5-45A0A087WSX0 123 aa8.4□□□□□ -1.06
CHD3-203ENST00000380358 A8MUN3 132 aa8.4□□□□□ -1.07
CHD3-203ENST00000380358 MRPL34Q9BQ48 92 aaKnown RBP8.39□□□□□ -1.07
CHD3-203ENST00000380358 IGHV3OR16-9A0A0B4J2B5 98 aa8.39□□□□□ -1.07
CHD3-203ENST00000380358 ABCA12Q86UK0 2595 aa8.39□□□□□ -1.07
CHD3-203ENST00000380358 A0A096LNJ9 63 aa8.38□□□□□ -1.07
CHD3-203ENST00000380358 UTRNP46939 3433 aa8.38□□□□□ -1.07
CHD3-203ENST00000380358 MIR22HGQ0VDD5 57 aa8.38□□□□□ -1.07
CHD3-203ENST00000380358 NCOR2Q9Y618 2525 aa8.37□□□□□ -1.07
CHD3-203ENST00000380358 LINC01561Q8N1V8 128 aa8.37□□□□□ -1.07
CHD3-203ENST00000380358 IGLV1-50A0A075B6I6 118 aa8.36□□□□□ -1.07
CHD3-203ENST00000380358 PRO0628Q9UI54 55 aa8.36□□□□□ -1.07
CHD3-203ENST00000380358 UQCR11O14957 56 aa8.35□□□□□ -1.07
CHD3-203ENST00000380358 ZNF462Q96JM2 2506 aa8.34□□□□□ -1.07
CHD3-203ENST00000380358 A8MWP4 228 aa8.33□□□□□ -1.08
CHD3-203ENST00000380358 PRO3102Q9H379 93 aa8.32□□□□□ -1.08
CHD3-203ENST00000380358 C15orf56Q8N910 161 aa8.32□□□□□ -1.08
CHD3-203ENST00000380358 LOC101927531A0A1B0GV80 90 aa8.32□□□□□ -1.08
CHD3-203ENST00000380358 CAMK2N1Q7Z7J9 78 aa8.31□□□□□ -1.08
CHD3-203ENST00000380358 WIPF1O43516 503 aa8.31□□□□□ -1.08
CHD3-203ENST00000380358 LUZP6Q538Z0 58 aa8.31□□□□□ -1.08
CHD3-203ENST00000380358 Q8NAQ8 132 aa8.3□□□□□ -1.08
CHD3-203ENST00000380358 SETD2Q9BYW2 2564 aaPredicted RBP8.28□□□□□ -1.08
CHD3-203ENST00000380358 KRTAP10-11P60412 298 aa8.28□□□□□ -1.08
CHD3-203ENST00000380358 PCNTO95613 3336 aa8.28□□□□□ -1.08
CHD3-203ENST00000380358 IGFL1Q6UW32 110 aa8.26□□□□□ -1.09
CHD3-203ENST00000380358 C8orf17Q9NRJ1 99 aa8.25□□□□□ -1.09
CHD3-203ENST00000380358 Q6ZSA8 131 aa8.25□□□□□ -1.09
CHD3-203ENST00000380358 CDC42SE1Q9NRR8 79 aa8.25□□□□□ -1.09
CHD3-203ENST00000380358 K7EIL1 84 aa8.25□□□□□ -1.09
CHD3-203ENST00000380358 LINC00336Q6ZUF6 198 aa8.25□□□□□ -1.09
CHD3-203ENST00000380358 GVQW2A0A096LPI5 108 aaPredicted RBP8.24□□□□□ -1.09
CHD3-203ENST00000380358 LINC00528Q8N1L1 170 aa8.23□□□□□ -1.09
CHD3-203ENST00000380358 SMCPP49901 116 aaPredicted RBP8.23□□□□□ -1.09
CHD3-203ENST00000380358 H3BPC8 53 aa8.22□□□□□ -1.09
CHD3-203ENST00000380358 ZNF861PO60384 105 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms