RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 LEPROTO15243 131 aa13.42□□□□□ -0.26
GFRA3-202ENST00000378362 MRPL55Q7Z7F7 128 aaKnown RBP13.42□□□□□ -0.26
GFRA3-202ENST00000378362 MEIG1Q5JSS6 88 aa13.41□□□□□ -0.26
GFRA3-202ENST00000378362 LINC00167Q96N53 147 aa13.41□□□□□ -0.26
GFRA3-202ENST00000378362 COX17Q14061 63 aa13.41□□□□□ -0.26
GFRA3-202ENST00000378362 J3QQQ9 107 aa13.4□□□□□ -0.26
GFRA3-202ENST00000378362 LINC01545Q5VT33 79 aa13.4□□□□□ -0.26
GFRA3-202ENST00000378362 IGLV7-43P04211 117 aa13.39□□□□□ -0.27
GFRA3-202ENST00000378362 HERVK_113P61574 105 aa13.39□□□□□ -0.27
GFRA3-202ENST00000378362 SFTA2Q6UW10 78 aa13.39□□□□□ -0.27
GFRA3-202ENST00000378362 DAND5Q8N907 189 aa13.39□□□□□ -0.27
GFRA3-202ENST00000378362 SPINK6Q6UWN8 80 aa13.38□□□□□ -0.27
GFRA3-202ENST00000378362 PET117Q6UWS5 81 aa13.38□□□□□ -0.27
GFRA3-202ENST00000378362 NKAPP1Q8N9T2 125 aa13.38□□□□□ -0.27
GFRA3-202ENST00000378362 PLEKHB2Q96CS7 222 aa13.38□□□□□ -0.27
GFRA3-202ENST00000378362 MYMXA0A1B0GTQ4 84 aa13.37□□□□□ -0.27
GFRA3-202ENST00000378362 OXTP01178 125 aa13.37□□□□□ -0.27
GFRA3-202ENST00000378362 LBHQ53QV2 105 aaPredicted RBP13.37□□□□□ -0.27
GFRA3-202ENST00000378362 MIR7-3HGQ8N6C7 128 aa13.37□□□□□ -0.27
GFRA3-202ENST00000378362 VPREB1P12018 145 aa13.36□□□□□ -0.27
GFRA3-202ENST00000378362 PLA2G2DQ9UNK4 145 aa13.36□□□□□ -0.27
GFRA3-202ENST00000378362 IGKV2-28A0A075B6P5 120 aa13.36□□□□□ -0.27
GFRA3-202ENST00000378362 IGKV2D-28P01615 120 aa13.36□□□□□ -0.27
GFRA3-202ENST00000378362 LGALS3P17931 250 aaKnown RBP13.36□□□□□ -0.27
GFRA3-202ENST00000378362 TP73-AS1Q9UF72 201 aa13.35□□□□□ -0.27
GFRA3-202ENST00000378362 HERV-K104P63124 156 aa13.34□□□□□ -0.27
GFRA3-202ENST00000378362 ATOH7Q8N100 152 aa13.34□□□□□ -0.27
GFRA3-202ENST00000378362 IGLV5-37A0A075B6J1 123 aa13.33□□□□□ -0.28
GFRA3-202ENST00000378362 E9PLD3 99 aa13.32□□□□□ -0.28
GFRA3-202ENST00000378362 MT1HL1P0DM35 61 aa13.32□□□□□ -0.28
GFRA3-202ENST00000378362 HIST3H2BBQ8N257 126 aa13.32□□□□□ -0.28
GFRA3-202ENST00000378362 TTTY13Q9BZ97 58 aa13.32□□□□□ -0.28
GFRA3-202ENST00000378362 IGKV2D-26A0A0A0MRZ7 120 aa13.32□□□□□ -0.28
GFRA3-202ENST00000378362 BOD1L2Q8IYS8 172 aa13.31□□□□□ -0.28
GFRA3-202ENST00000378362 HIST1H2BLQ99880 126 aa13.29□□□□□ -0.28
GFRA3-202ENST00000378362 RPL24P83731 157 aaKnown RBP13.29□□□□□ -0.28
GFRA3-202ENST00000378362 NPC2P61916 151 aa13.28□□□□□ -0.28
GFRA3-202ENST00000378362 TMEM238C9JI98 176 aa13.27□□□□□ -0.28
GFRA3-202ENST00000378362 S100A6P06703 90 aa13.27□□□□□ -0.28
GFRA3-202ENST00000378362 A0A0J9YXY3 114 aa13.27□□□□□ -0.29
GFRA3-202ENST00000378362 NCR3O14931 201 aa13.27□□□□□ -0.29
GFRA3-202ENST00000378362 S100A2P29034 98 aa13.27□□□□□ -0.29
GFRA3-202ENST00000378362 NMUP48645 174 aa13.27□□□□□ -0.29
GFRA3-202ENST00000378362 SNRPEP62304 92 aaKnown RBP13.27□□□□□ -0.29
GFRA3-202ENST00000378362 ADAMTSL4-AS1Q5T5F5 129 aa13.27□□□□□ -0.29
GFRA3-202ENST00000378362 REG3GQ6UW15 175 aa13.26□□□□□ -0.29
GFRA3-202ENST00000378362 LINC01600Q96MT4 127 aa13.26□□□□□ -0.29
GFRA3-202ENST00000378362 IGLV1-50A0A075B6I6 118 aa13.25□□□□□ -0.29
GFRA3-202ENST00000378362 EIF4EBP3O60516 100 aaPredicted RBP13.25□□□□□ -0.29
GFRA3-202ENST00000378362 DIRC1Q969H9 104 aa13.25□□□□□ -0.29
GFRA3-202ENST00000378362 LINC00587B1AMM8 73 aa13.24□□□□□ -0.29
GFRA3-202ENST00000378362 H0Y9J4 135 aa13.24□□□□□ -0.29
GFRA3-202ENST00000378362 BCE1O60756 84 aa13.24□□□□□ -0.29
GFRA3-202ENST00000378362 ANKRD39Q53RE8 183 aa13.24□□□□□ -0.29
GFRA3-202ENST00000378362 C20orf202A1L168 122 aa13.23□□□□□ -0.29
GFRA3-202ENST00000378362 ZNF861PO60384 105 aa13.23□□□□□ -0.29
GFRA3-202ENST00000378362 ZNF815PA8K554 130 aa13.21□□□□□ -0.29
GFRA3-202ENST00000378362 SOSTDC1Q6X4U4 206 aa13.2□□□□□ -0.3
GFRA3-202ENST00000378362 S100A12P80511 92 aa13.2□□□□□ -0.3
GFRA3-202ENST00000378362 PRLHP81277 87 aa13.2□□□□□ -0.3
GFRA3-202ENST00000378362 TMEM126AQ9H061 195 aa13.2□□□□□ -0.3
GFRA3-202ENST00000378362 M0R378 163 aa13.19□□□□□ -0.3
GFRA3-202ENST00000378362 UBE2AP49459 152 aa13.18□□□□□ -0.3
GFRA3-202ENST00000378362 PRR26Q8N8Z3 221 aa13.18□□□□□ -0.3
GFRA3-202ENST00000378362 LITAFQ99732 161 aa13.18□□□□□ -0.3
GFRA3-202ENST00000378362 HMCN2Q8NDA2 5059 aa13.17□□□□□ -0.3
GFRA3-202ENST00000378362 KRTAP1-4P0C5Y4 121 aa13.17□□□□□ -0.3
GFRA3-202ENST00000378362 KRTAP10-8P60410 259 aa13.16□□□□□ -0.3
GFRA3-202ENST00000378362 FAM19A1Q7Z5A9 133 aa13.16□□□□□ -0.3
GFRA3-202ENST00000378362 PCP2Q8IVA1 136 aa13.16□□□□□ -0.3
GFRA3-202ENST00000378362 MIEN1Q9BRT3 115 aa13.16□□□□□ -0.3
GFRA3-202ENST00000378362 C5orf52A6NGY3 159 aa13.16□□□□□ -0.3
GFRA3-202ENST00000378362 RPL28P46779 137 aaKnown RBP13.16□□□□□ -0.3
GFRA3-202ENST00000378362 LINC00518Q8N0U6 118 aa13.16□□□□□ -0.3
GFRA3-202ENST00000378362 TRBV10-3A0A0K0K1G6 114 aa13.15□□□□□ -0.3
GFRA3-202ENST00000378362 KRTAP13-1Q8IUC0 172 aa13.14□□□□□ -0.31
GFRA3-202ENST00000378362 ANAPC11Q9NYG5 84 aa13.14□□□□□ -0.31
GFRA3-202ENST00000378362 LOC107984156A0A0G2JMH3 177 aa13.13□□□□□ -0.31
GFRA3-202ENST00000378362 ARL17AQ8IVW1 177 aa13.13□□□□□ -0.31
GFRA3-202ENST00000378362 SCGB1D4Q6XE38 83 aa13.1□□□□□ -0.31
GFRA3-202ENST00000378362 LINC00308Q8TCZ7 52 aa13.1□□□□□ -0.31
GFRA3-202ENST00000378362 SCGB1D1O95968 90 aa13.09□□□□□ -0.31
GFRA3-202ENST00000378362 DDTP30046 118 aa13.07□□□□□ -0.32
GFRA3-202ENST00000378362 HIGD2AQ9BW72 106 aa13.06□□□□□ -0.32
GFRA3-202ENST00000378362 KCNQ1DNQ9H478 68 aa13.06□□□□□ -0.32
GFRA3-202ENST00000378362 SPANXB1Q9NS25 103 aaPredicted RBP13.06□□□□□ -0.32
GFRA3-202ENST00000378362 TIMM17BO60830 172 aa13.06□□□□□ -0.32
GFRA3-202ENST00000378362 PRYO14603 147 aa13.04□□□□□ -0.32
GFRA3-202ENST00000378362 S100A7L2Q5SY68 101 aa13.04□□□□□ -0.32
GFRA3-202ENST00000378362 A0A087X002 238 aa13.04□□□□□ -0.32
GFRA3-202ENST00000378362 NDUFC2O95298 119 aa13.04□□□□□ -0.32
GFRA3-202ENST00000378362 TRBV10-2A0A0K0K1G8 114 aa13.03□□□□□ -0.32
GFRA3-202ENST00000378362 AKR1D1P51857 326 aa13.02□□□□□ -0.33
GFRA3-202ENST00000378362 HSBP1L1C9JCN9 74 aa13.01□□□□□ -0.33
GFRA3-202ENST00000378362 KRTAP4-16G5E9R7 235 aaPredicted RBP13.01□□□□□ -0.33
GFRA3-202ENST00000378362 IGLV6-57P01721 117 aa13.01□□□□□ -0.33
GFRA3-202ENST00000378362 SPRR1AP35321 89 aa13.01□□□□□ -0.33
GFRA3-202ENST00000378362 ETDCA0A1B0GVM5 59 aa13□□□□□ -0.33
GFRA3-202ENST00000378362 SPANXCQ9NY87 97 aa13□□□□□ -0.33
GFRA3-202ENST00000378362 PCP4L1A6NKN8 68 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms