RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 CDIP1Q9H305 208 aa12.3□□□□□ -0.44
CNTNAP3-204ENST00000377656 PTPRBP23467 1997 aa12.3□□□□□ -0.44
CNTNAP3-204ENST00000377656 TRBV7-6A0A0J9YX20 115 aa12.3□□□□□ -0.44
CNTNAP3-204ENST00000377656 H3BNG1 76 aa12.3□□□□□ -0.44
CNTNAP3-204ENST00000377656 MDFIQ99750 246 aa12.3□□□□□ -0.44
CNTNAP3-204ENST00000377656 Q9UF83 564 aa12.29□□□□□ -0.44
CNTNAP3-204ENST00000377656 C6orf48Q9UBA6 75 aa12.28□□□□□ -0.44
CNTNAP3-204ENST00000377656 PCSK5Q92824 1860 aa12.28□□□□□ -0.44
CNTNAP3-204ENST00000377656 TRBV7-7A0A0K0K1E9 115 aa12.27□□□□□ -0.44
CNTNAP3-204ENST00000377656 PCOTHQ58A44 107 aa12.27□□□□□ -0.44
CNTNAP3-204ENST00000377656 MGAM2Q2M2H8 2515 aa12.27□□□□□ -0.44
CNTNAP3-204ENST00000377656 KLK9Q2XQG4 91 aa12.27□□□□□ -0.45
CNTNAP3-204ENST00000377656 LINC00167Q96N53 147 aa12.26□□□□□ -0.45
CNTNAP3-204ENST00000377656 PRO0461Q9UI25 63 aa12.26□□□□□ -0.45
CNTNAP3-204ENST00000377656 HCG22E2RYF7 251 aa12.26□□□□□ -0.45
CNTNAP3-204ENST00000377656 H0Y9P7 68 aa12.26□□□□□ -0.45
CNTNAP3-204ENST00000377656 KIAA0087Q14695 138 aa12.26□□□□□ -0.45
CNTNAP3-204ENST00000377656 KRTAP24-1Q3LI83 254 aa12.25□□□□□ -0.45
CNTNAP3-204ENST00000377656 TMEM254Q8TBM7 123 aa12.25□□□□□ -0.45
CNTNAP3-204ENST00000377656 SOSTDC1Q6X4U4 206 aa12.25□□□□□ -0.45
CNTNAP3-204ENST00000377656 SMCPP49901 116 aaPredicted RBP12.25□□□□□ -0.45
CNTNAP3-204ENST00000377656 HECTD1Q9ULT8 2610 aa12.24□□□□□ -0.45
CNTNAP3-204ENST00000377656 RETNLBQ9BQ08 111 aa12.24□□□□□ -0.45
CNTNAP3-204ENST00000377656 SBSPONQ8IVN8 264 aa12.24□□□□□ -0.45
CNTNAP3-204ENST00000377656 LIMD2Q9BT23 127 aa12.23□□□□□ -0.45
CNTNAP3-204ENST00000377656 CXCL6P80162 114 aa12.23□□□□□ -0.45
CNTNAP3-204ENST00000377656 SPATA3Q8NHX4 192 aa12.21□□□□□ -0.45
CNTNAP3-204ENST00000377656 COL27A1Q8IZC6 1860 aaPredicted RBP12.19□□□□□ -0.46
CNTNAP3-204ENST00000377656 Q8NAQ8 132 aa12.18□□□□□ -0.46
CNTNAP3-204ENST00000377656 hDV103S1A0JD37 113 aa12.16□□□□□ -0.46
CNTNAP3-204ENST00000377656 SPINK1P00995 79 aa12.15□□□□□ -0.46
CNTNAP3-204ENST00000377656 FAM218AQ96MZ4 157 aa12.15□□□□□ -0.47
CNTNAP3-204ENST00000377656 ELOF1P60002 83 aaKnown RBP12.14□□□□□ -0.47
CNTNAP3-204ENST00000377656 MOBPQ13875 183 aa12.12□□□□□ -0.47
CNTNAP3-204ENST00000377656 C1orf64Q8NEQ6 169 aa12.12□□□□□ -0.47
CNTNAP3-204ENST00000377656 ATRQ13535 2644 aa12.12□□□□□ -0.47
CNTNAP3-204ENST00000377656 MAST4O15021 2626 aa12.11□□□□□ -0.47
CNTNAP3-204ENST00000377656 A0A1B0GW54 56 aa12.11□□□□□ -0.47
CNTNAP3-204ENST00000377656 LINC00588Q9Y4M8 146 aa12.11□□□□□ -0.47
CNTNAP3-204ENST00000377656 NBDYA0A0U1RRE5 68 aa12.1□□□□□ -0.47
CNTNAP3-204ENST00000377656 Q6ZRX8 168 aa12.1□□□□□ -0.47
CNTNAP3-204ENST00000377656 SMIM29Q86T20 159 aa12.09□□□□□ -0.47
CNTNAP3-204ENST00000377656 C1orf195Q5TG92 126 aa12.09□□□□□ -0.47
CNTNAP3-204ENST00000377656 SPACA4Q8TDM5 124 aa12.09□□□□□ -0.47
CNTNAP3-204ENST00000377656 PSPHP1O15172 72 aa12.08□□□□□ -0.48
CNTNAP3-204ENST00000377656 IGKV2D-30A0A075B6S6 120 aa12.08□□□□□ -0.48
CNTNAP3-204ENST00000377656 IGKV2-30P06310 120 aa12.08□□□□□ -0.48
CNTNAP3-204ENST00000377656 PHF5AQ7RTV0 110 aaKnown RBP12.08□□□□□ -0.48
CNTNAP3-204ENST00000377656 PMAIP1Q13794 54 aa12.07□□□□□ -0.48
CNTNAP3-204ENST00000377656 Q8NBF4 154 aa12.07□□□□□ -0.48
CNTNAP3-204ENST00000377656 GVQW2A0A096LPI5 108 aaPredicted RBP12.06□□□□□ -0.48
CNTNAP3-204ENST00000377656 C16orf90A8MZG2 172 aa12.06□□□□□ -0.48
CNTNAP3-204ENST00000377656 C5orf42Q9H799 3197 aa12.06□□□□□ -0.48
CNTNAP3-204ENST00000377656 TP53AIP1Q9HCN2 124 aa12.05□□□□□ -0.48
CNTNAP3-204ENST00000377656 LINC00476Q8WZB0 136 aa12.04□□□□□ -0.48
CNTNAP3-204ENST00000377656 CHD7Q9P2D1 2997 aa12.04□□□□□ -0.48
CNTNAP3-204ENST00000377656 RTL8CO15255 209 aa12.04□□□□□ -0.48
CNTNAP3-204ENST00000377656 Q6ZQT0 140 aa12.03□□□□□ -0.48
CNTNAP3-204ENST00000377656 EPM2AB3EWF7 344 aa12.02□□□□□ -0.48
CNTNAP3-204ENST00000377656 CRYGAP11844 174 aa12.02□□□□□ -0.49
CNTNAP3-204ENST00000377656 BCE1O60756 84 aa12.02□□□□□ -0.49
CNTNAP3-204ENST00000377656 DNAH10OSP0CZ25 163 aa12.01□□□□□ -0.49
CNTNAP3-204ENST00000377656 LITAFQ99732 161 aa12.01□□□□□ -0.49
CNTNAP3-204ENST00000377656 LOC110117498A0A087WWA1 95 aa12.01□□□□□ -0.49
CNTNAP3-204ENST00000377656 Q6ZRP5 223 aa12□□□□□ -0.49
CNTNAP3-204ENST00000377656 BPTFQ12830 3046 aa11.99□□□□□ -0.49
CNTNAP3-204ENST00000377656 ST20-AS1Q8NBB2 130 aa11.99□□□□□ -0.49
CNTNAP3-204ENST00000377656 CSNK1G2-AS1Q8NCQ2 148 aa11.98□□□□□ -0.49
CNTNAP3-204ENST00000377656 CHTF8P0CG12 524 aa11.97□□□□□ -0.49
CNTNAP3-204ENST00000377656 VPREB1P12018 145 aa11.97□□□□□ -0.49
CNTNAP3-204ENST00000377656 RANBP2P49792 3224 aaKnown RBP11.96□□□□□ -0.49
CNTNAP3-204ENST00000377656 IGLV6-57P01721 117 aa11.94□□□□□ -0.5
CNTNAP3-204ENST00000377656 FAM229AH3BQW9 127 aa11.93□□□□□ -0.5
CNTNAP3-204ENST00000377656 A0A096LNT2 108 aa11.92□□□□□ -0.5
CNTNAP3-204ENST00000377656 C7orf65Q6ZTY9 151 aa11.92□□□□□ -0.5
CNTNAP3-204ENST00000377656 WWC2-AS2Q96NR7 200 aa11.92□□□□□ -0.5
CNTNAP3-204ENST00000377656 TYMSOSQ8TAI1 123 aa11.91□□□□□ -0.5
CNTNAP3-204ENST00000377656 H3BPC8 53 aa11.89□□□□□ -0.51
CNTNAP3-204ENST00000377656 ACYP2P14621 99 aa11.89□□□□□ -0.51
CNTNAP3-204ENST00000377656 TRAV22A0A0B4J277 110 aa11.89□□□□□ -0.51
CNTNAP3-204ENST00000377656 LINC00313P59037 77 aa11.88□□□□□ -0.51
CNTNAP3-204ENST00000377656 TRBV7-4A0A0J9YYF1 115 aa11.88□□□□□ -0.51
CNTNAP3-204ENST00000377656 FAM168BA1KXE4 195 aa11.87□□□□□ -0.51
CNTNAP3-204ENST00000377656 FLNAP21333 2647 aaKnown RBP11.87□□□□□ -0.51
CNTNAP3-204ENST00000377656 CENPEQ02224 2701 aa11.87□□□□□ -0.51
CNTNAP3-204ENST00000377656 A0A0C4DFX4 3053 aa11.86□□□□□ -0.51
CNTNAP3-204ENST00000377656 A0A1B0GU69 56 aa11.85□□□□□ -0.51
CNTNAP3-204ENST00000377656 SERTAD4-AS1Q5TG53 156 aa11.85□□□□□ -0.51
CNTNAP3-204ENST00000377656 PRR34Q9NV39 138 aa11.85□□□□□ -0.51
CNTNAP3-204ENST00000377656 K7EIL1 84 aa11.85□□□□□ -0.51
CNTNAP3-204ENST00000377656 C19orf73Q9NVV2 129 aa11.85□□□□□ -0.51
CNTNAP3-204ENST00000377656 GIG44P09565 113 aaPredicted RBP11.84□□□□□ -0.51
CNTNAP3-204ENST00000377656 RPL37AP61513 92 aaKnown RBP11.84□□□□□ -0.51
CNTNAP3-204ENST00000377656 KCNQ1DNQ9H478 68 aa11.84□□□□□ -0.51
CNTNAP3-204ENST00000377656 HELZ2Q9BYK8 2649 aaKnown RBP11.84□□□□□ -0.51
CNTNAP3-204ENST00000377656 TM2D3Q9BRN9 247 aa11.84□□□□□ -0.51
CNTNAP3-204ENST00000377656 IGLV1-50A0A075B6I6 118 aa11.83□□□□□ -0.52
CNTNAP3-204ENST00000377656 KRTAP10-11P60412 298 aa11.83□□□□□ -0.52
CNTNAP3-204ENST00000377656 LINC00528Q8N1L1 170 aa11.81□□□□□ -0.52
CNTNAP3-204ENST00000377656 ITPR3Q14573 2671 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms