RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 PMAIP1Q13794 54 aa12.97□□□□□ -0.33
CNTNAP3B-203ENST00000377561 PRRC2CQ9Y520 2896 aaKnown RBP12.97□□□□□ -0.33
CNTNAP3B-203ENST00000377561 SPINK1P00995 79 aa12.96□□□□□ -0.33
CNTNAP3B-203ENST00000377561 DEFB116Q30KQ4 102 aa12.96□□□□□ -0.33
CNTNAP3B-203ENST00000377561 H0Y9P7 68 aa12.95□□□□□ -0.34
CNTNAP3B-203ENST00000377561 PRLHP81277 87 aa12.94□□□□□ -0.34
CNTNAP3B-203ENST00000377561 NHLRC4P0CG21 123 aaPredicted RBP12.94□□□□□ -0.34
CNTNAP3B-203ENST00000377561 LIMD2Q9BT23 127 aa12.93□□□□□ -0.34
CNTNAP3B-203ENST00000377561 MUC4Q99102 2169 aa12.92□□□□□ -0.34
CNTNAP3B-203ENST00000377561 C22orf24Q9Y442 160 aa12.91□□□□□ -0.34
CNTNAP3B-203ENST00000377561 HCG22E2RYF7 251 aa12.91□□□□□ -0.34
CNTNAP3B-203ENST00000377561 SBSPONQ8IVN8 264 aa12.91□□□□□ -0.34
CNTNAP3B-203ENST00000377561 SMCR5Q8TEV8 140 aa12.9□□□□□ -0.34
CNTNAP3B-203ENST00000377561 CHD7Q9P2D1 2997 aa12.89□□□□□ -0.35
CNTNAP3B-203ENST00000377561 FAM218AQ96MZ4 157 aa12.88□□□□□ -0.35
CNTNAP3B-203ENST00000377561 H3BNG1 76 aa12.87□□□□□ -0.35
CNTNAP3B-203ENST00000377561 TMEM254Q8TBM7 123 aa12.87□□□□□ -0.35
CNTNAP3B-203ENST00000377561 ACANP16112 2415 aa12.87□□□□□ -0.35
CNTNAP3B-203ENST00000377561 C6orf48Q9UBA6 75 aa12.86□□□□□ -0.35
CNTNAP3B-203ENST00000377561 PCNTO95613 3336 aa12.86□□□□□ -0.35
CNTNAP3B-203ENST00000377561 PSPHP1O15172 72 aa12.85□□□□□ -0.35
CNTNAP3B-203ENST00000377561 LITAFQ99732 161 aa12.85□□□□□ -0.35
CNTNAP3B-203ENST00000377561 CRYGAP11844 174 aa12.84□□□□□ -0.35
CNTNAP3B-203ENST00000377561 CXCL6P80162 114 aa12.83□□□□□ -0.36
CNTNAP3B-203ENST00000377561 hDV103S1A0JD37 113 aa12.83□□□□□ -0.36
CNTNAP3B-203ENST00000377561 MDFIQ99750 246 aa12.82□□□□□ -0.36
CNTNAP3B-203ENST00000377561 KIAA0087Q14695 138 aa12.8□□□□□ -0.36
CNTNAP3B-203ENST00000377561 Q8NAQ8 132 aa12.8□□□□□ -0.36
CNTNAP3B-203ENST00000377561 C1orf64Q8NEQ6 169 aa12.79□□□□□ -0.36
CNTNAP3B-203ENST00000377561 SPATA3Q8NHX4 192 aa12.79□□□□□ -0.36
CNTNAP3B-203ENST00000377561 IGKV2D-30A0A075B6S6 120 aa12.78□□□□□ -0.36
CNTNAP3B-203ENST00000377561 IGKV2-30P06310 120 aa12.78□□□□□ -0.36
CNTNAP3B-203ENST00000377561 C4orf26Q17RF5 130 aa12.78□□□□□ -0.36
CNTNAP3B-203ENST00000377561 FASNP49327 2511 aaKnown RBP12.78□□□□□ -0.36
CNTNAP3B-203ENST00000377561 A0A096LNT2 108 aa12.77□□□□□ -0.36
CNTNAP3B-203ENST00000377561 LINC00167Q96N53 147 aa12.76□□□□□ -0.37
CNTNAP3B-203ENST00000377561 ELOF1P60002 83 aaKnown RBP12.75□□□□□ -0.37
CNTNAP3B-203ENST00000377561 PRO0628Q9UI54 55 aa12.75□□□□□ -0.37
CNTNAP3B-203ENST00000377561 C5orf42Q9H799 3197 aa12.74□□□□□ -0.37
CNTNAP3B-203ENST00000377561 BPTFQ12830 3046 aa12.74□□□□□ -0.37
CNTNAP3B-203ENST00000377561 RPS28P62857 69 aaKnown RBP12.73□□□□□ -0.37
CNTNAP3B-203ENST00000377561 CSNK1G2-AS1Q8NCQ2 148 aa12.73□□□□□ -0.37
CNTNAP3B-203ENST00000377561 SPACA4Q8TDM5 124 aa12.73□□□□□ -0.37
CNTNAP3B-203ENST00000377561 MOBPQ13875 183 aa12.72□□□□□ -0.37
CNTNAP3B-203ENST00000377561 SMIM29Q86T20 159 aa12.72□□□□□ -0.37
CNTNAP3B-203ENST00000377561 EPG5Q9HCE0 2579 aa12.72□□□□□ -0.37
CNTNAP3B-203ENST00000377561 CHD9Q3L8U1 2897 aa12.71□□□□□ -0.37
CNTNAP3B-203ENST00000377561 HTTP42858 3142 aa12.71□□□□□ -0.37
CNTNAP3B-203ENST00000377561 C7orf65Q6ZTY9 151 aa12.7□□□□□ -0.38
CNTNAP3B-203ENST00000377561 KRTAP24-1Q3LI83 254 aa12.7□□□□□ -0.38
CNTNAP3B-203ENST00000377561 GVQW2A0A096LPI5 108 aaPredicted RBP12.69□□□□□ -0.38
CNTNAP3B-203ENST00000377561 Q6ZQT0 140 aa12.69□□□□□ -0.38
CNTNAP3B-203ENST00000377561 LOC110117498A0A087WWA1 95 aa12.68□□□□□ -0.38
CNTNAP3B-203ENST00000377561 TP53AIP1Q9HCN2 124 aa12.68□□□□□ -0.38
CNTNAP3B-203ENST00000377561 F8P00451 2351 aa12.67□□□□□ -0.38
CNTNAP3B-203ENST00000377561 BCE1O60756 84 aa12.67□□□□□ -0.38
CNTNAP3B-203ENST00000377561 A0A1B0GW54 56 aa12.66□□□□□ -0.38
CNTNAP3B-203ENST00000377561 A0A1B0GU69 56 aa12.64□□□□□ -0.39
CNTNAP3B-203ENST00000377561 Q6ZRX8 168 aa12.63□□□□□ -0.39
CNTNAP3B-203ENST00000377561 GIG44P09565 113 aaPredicted RBP12.61□□□□□ -0.39
CNTNAP3B-203ENST00000377561 EIF4EBP3O60516 100 aaPredicted RBP12.61□□□□□ -0.39
CNTNAP3B-203ENST00000377561 LINC00588Q9Y4M8 146 aa12.61□□□□□ -0.39
CNTNAP3B-203ENST00000377561 IGLV6-57P01721 117 aa12.61□□□□□ -0.39
CNTNAP3B-203ENST00000377561 ACYP2P14621 99 aa12.61□□□□□ -0.39
CNTNAP3B-203ENST00000377561 PHF5AQ7RTV0 110 aaKnown RBP12.61□□□□□ -0.39
CNTNAP3B-203ENST00000377561 C19orf73Q9NVV2 129 aa12.6□□□□□ -0.39
CNTNAP3B-203ENST00000377561 RTL8CO15255 209 aa12.58□□□□□ -0.4
CNTNAP3B-203ENST00000377561 VPREB1P12018 145 aa12.58□□□□□ -0.4
CNTNAP3B-203ENST00000377561 FAM229AH3BQW9 127 aa12.57□□□□□ -0.4
CNTNAP3B-203ENST00000377561 Q8NBF4 154 aa12.57□□□□□ -0.4
CNTNAP3B-203ENST00000377561 LINC00476Q8WZB0 136 aa12.57□□□□□ -0.4
CNTNAP3B-203ENST00000377561 NBDYA0A0U1RRE5 68 aa12.57□□□□□ -0.4
CNTNAP3B-203ENST00000377561 Q6ZRP5 223 aa12.57□□□□□ -0.4
CNTNAP3B-203ENST00000377561 DNAH10OSP0CZ25 163 aa12.57□□□□□ -0.4
CNTNAP3B-203ENST00000377561 EPM2AB3EWF7 344 aa12.55□□□□□ -0.4
CNTNAP3B-203ENST00000377561 C16orf90A8MZG2 172 aa12.54□□□□□ -0.4
CNTNAP3B-203ENST00000377561 LINC00612Q8N6U2 182 aa12.54□□□□□ -0.4
CNTNAP3B-203ENST00000377561 TYMSOSQ8TAI1 123 aa12.53□□□□□ -0.4
CNTNAP3B-203ENST00000377561 LINC00313P59037 77 aa12.52□□□□□ -0.4
CNTNAP3B-203ENST00000377561 SPAG11AQ6PDA7 123 aa12.52□□□□□ -0.41
CNTNAP3B-203ENST00000377561 PRR34Q9NV39 138 aa12.52□□□□□ -0.41
CNTNAP3B-203ENST00000377561 CHTF8P0CG12 524 aa12.51□□□□□ -0.41
CNTNAP3B-203ENST00000377561 ST20-AS1Q8NBB2 130 aa12.51□□□□□ -0.41
CNTNAP3B-203ENST00000377561 ZNF575Q86XF7 245 aa12.5□□□□□ -0.41
CNTNAP3B-203ENST00000377561 H3BPC8 53 aa12.5□□□□□ -0.41
CNTNAP3B-203ENST00000377561 TM2D3Q9BRN9 247 aa12.5□□□□□ -0.41
CNTNAP3B-203ENST00000377561 TRANK1O15050 2925 aa12.48□□□□□ -0.41
CNTNAP3B-203ENST00000377561 KRTAP10-3P60369 221 aa12.48□□□□□ -0.41
CNTNAP3B-203ENST00000377561 TRAV22A0A0B4J277 110 aa12.47□□□□□ -0.41
CNTNAP3B-203ENST00000377561 RANBP2P49792 3224 aaKnown RBP12.47□□□□□ -0.41
CNTNAP3B-203ENST00000377561 KRTAP1-3Q8IUG1 177 aa12.46□□□□□ -0.42
CNTNAP3B-203ENST00000377561 KCNQ1DNQ9H478 68 aa12.44□□□□□ -0.42
CNTNAP3B-203ENST00000377561 SERTAD4-AS1Q5TG53 156 aa12.43□□□□□ -0.42
CNTNAP3B-203ENST00000377561 KRTAP10-11P60412 298 aa12.43□□□□□ -0.42
CNTNAP3B-203ENST00000377561 ATP11AUNQ6ZP68 121 aa12.43□□□□□ -0.42
CNTNAP3B-203ENST00000377561 LINC00528Q8N1L1 170 aa12.43□□□□□ -0.42
CNTNAP3B-203ENST00000377561 RPL37AP61513 92 aaKnown RBP12.42□□□□□ -0.42
CNTNAP3B-203ENST00000377561 FAM168BA1KXE4 195 aa12.42□□□□□ -0.42
CNTNAP3B-203ENST00000377561 TRBV7-4A0A0J9YYF1 115 aa12.42□□□□□ -0.42
CNTNAP3B-203ENST00000377561 PLA2G1BP04054 148 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms