RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 REG3AQ06141 175 aa11.22□□□□□ -0.61
TRIM39-201ENST00000376656 LINC00482Q8N8I6 264 aa11.22□□□□□ -0.61
TRIM39-201ENST00000376656 ITPR3Q14573 2671 aa11.21□□□□□ -0.61
TRIM39-201ENST00000376656 CCDC168Q8NDH2 2452 aa11.21□□□□□ -0.61
TRIM39-201ENST00000376656 UNQ6190/PRO20217Q6UXQ8 127 aa11.21□□□□□ -0.61
TRIM39-201ENST00000376656 Q6ZQY7 126 aa11.21□□□□□ -0.62
TRIM39-201ENST00000376656 SNURFQ9Y675 71 aa11.2□□□□□ -0.62
TRIM39-201ENST00000376656 KRTAP1-3Q8IUG1 177 aa11.19□□□□□ -0.62
TRIM39-201ENST00000376656 ZNF462Q96JM2 2506 aa11.19□□□□□ -0.62
TRIM39-201ENST00000376656 BCE1O60756 84 aa11.18□□□□□ -0.62
TRIM39-201ENST00000376656 PRB1P04280 392 aa11.18□□□□□ -0.62
TRIM39-201ENST00000376656 RMI2Q96E14 147 aa11.18□□□□□ -0.62
TRIM39-201ENST00000376656 X6R8D5 127 aa11.18□□□□□ -0.62
TRIM39-201ENST00000376656 IGLV6-57P01721 117 aa11.17□□□□□ -0.62
TRIM39-201ENST00000376656 SPAG11BQ08648 103 aa11.17□□□□□ -0.62
TRIM39-201ENST00000376656 EPM2AB3EWF7 344 aa11.16□□□□□ -0.62
TRIM39-201ENST00000376656 SERP1Q9Y6X1 66 aa11.16□□□□□ -0.62
TRIM39-201ENST00000376656 KLKP1Q107X0 134 aa11.16□□□□□ -0.62
TRIM39-201ENST00000376656 SCXQ7RTU7 201 aa11.16□□□□□ -0.62
TRIM39-201ENST00000376656 C9orf66Q5T8R8 295 aa11.15□□□□□ -0.62
TRIM39-201ENST00000376656 MUC7Q8TAX7 377 aa11.15□□□□□ -0.62
TRIM39-201ENST00000376656 CYSRT1A8MQ03 144 aa11.14□□□□□ -0.63
TRIM39-201ENST00000376656 DEFB4AO15263 64 aa11.14□□□□□ -0.63
TRIM39-201ENST00000376656 FLNAP21333 2647 aaKnown RBP11.14□□□□□ -0.63
TRIM39-201ENST00000376656 CXCL6P80162 114 aa11.14□□□□□ -0.63
TRIM39-201ENST00000376656 WFDC11Q8NEX6 87 aa11.12□□□□□ -0.63
TRIM39-201ENST00000376656 F8WEM9 126 aa11.12□□□□□ -0.63
TRIM39-201ENST00000376656 TM2D3Q9BRN9 247 aa11.12□□□□□ -0.63
TRIM39-201ENST00000376656 A0A0J9YWU9 116 aa11.11□□□□□ -0.63
TRIM39-201ENST00000376656 IGHV4-30-4P0DP06 118 aa11.11□□□□□ -0.63
TRIM39-201ENST00000376656 PDE6GP18545 87 aa11.11□□□□□ -0.63
TRIM39-201ENST00000376656 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
TRIM39-201ENST00000376656 MTORP42345 2549 aa11.1□□□□□ -0.63
TRIM39-201ENST00000376656 TRBV7-4A0A0J9YYF1 115 aa11.09□□□□□ -0.63
TRIM39-201ENST00000376656 DIRC1Q969H9 104 aa11.09□□□□□ -0.63
TRIM39-201ENST00000376656 C16orf95Q9H693 158 aa11.09□□□□□ -0.63
TRIM39-201ENST00000376656 UBR5O95071 2799 aaPredicted RBP11.09□□□□□ -0.63
TRIM39-201ENST00000376656 C1orf43Q9BWL3 253 aa11.08□□□□□ -0.64
TRIM39-201ENST00000376656 ACANP16112 2415 aa11.07□□□□□ -0.64
TRIM39-201ENST00000376656 PKIGQ9Y2B9 76 aa11.07□□□□□ -0.64
TRIM39-201ENST00000376656 LYRM9A8MSI8 78 aa11.06□□□□□ -0.64
TRIM39-201ENST00000376656 ZNF73O43830 326 aaPredicted RBP11.06□□□□□ -0.64
TRIM39-201ENST00000376656 C6orf48Q9UBA6 75 aa11.06□□□□□ -0.64
TRIM39-201ENST00000376656 H3BQ85 93 aa11.06□□□□□ -0.64
TRIM39-201ENST00000376656 COX7BP24311 80 aa11.06□□□□□ -0.64
TRIM39-201ENST00000376656 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.06□□□□□ -0.64
TRIM39-201ENST00000376656 KLK12Q9UKR0 248 aa11.06□□□□□ -0.64
TRIM39-201ENST00000376656 FP248Q71RG6 208 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-201ENST00000376656 LINC00336Q6ZUF6 198 aa11.05□□□□□ -0.64
TRIM39-201ENST00000376656 DEFB135Q30KP9 77 aa11.04□□□□□ -0.64
TRIM39-201ENST00000376656 ELOF1P60002 83 aaKnown RBP11.03□□□□□ -0.64
TRIM39-201ENST00000376656 SEC61GP60059 68 aa11.03□□□□□ -0.64
TRIM39-201ENST00000376656 DAD1P61803 113 aa11.03□□□□□ -0.64
TRIM39-201ENST00000376656 ANK3Q12955 4377 aaKnown RBP11.03□□□□□ -0.64
TRIM39-201ENST00000376656 F8WDY8 70 aa11.02□□□□□ -0.64
TRIM39-201ENST00000376656 NREPQ16612 68 aa11.02□□□□□ -0.64
TRIM39-201ENST00000376656 GVQW2A0A096LPI5 108 aaPredicted RBP11.02□□□□□ -0.65
TRIM39-201ENST00000376656 Q8N9L7 120 aa11.02□□□□□ -0.65
TRIM39-201ENST00000376656 CELA1Q9UNI1 258 aa11.02□□□□□ -0.65
TRIM39-201ENST00000376656 SMIM26A0A096LP01 95 aa11.01□□□□□ -0.65
TRIM39-201ENST00000376656 MIFP14174 115 aa11.01□□□□□ -0.65
TRIM39-201ENST00000376656 HTN3P15516 51 aa11.01□□□□□ -0.65
TRIM39-201ENST00000376656 PRR34Q9NV39 138 aa11.01□□□□□ -0.65
TRIM39-201ENST00000376656 LINC00474Q9P2X8 69 aa11.01□□□□□ -0.65
TRIM39-201ENST00000376656 BPY2O14599 106 aa11□□□□□ -0.65
TRIM39-201ENST00000376656 TRBV7-6A0A0J9YX20 115 aa11□□□□□ -0.65
TRIM39-201ENST00000376656 LELP1Q5T871 98 aa11□□□□□ -0.65
TRIM39-201ENST00000376656 MRAPQ8TCY5 172 aa11□□□□□ -0.65
TRIM39-201ENST00000376656 KRTAP10-3P60369 221 aa10.99□□□□□ -0.65
TRIM39-201ENST00000376656 NDUFC1O43677 76 aa10.99□□□□□ -0.65
TRIM39-201ENST00000376656 KRTAP1-1Q07627 177 aa10.99□□□□□ -0.65
TRIM39-201ENST00000376656 TMEM254Q8TBM7 123 aa10.98□□□□□ -0.65
TRIM39-201ENST00000376656 VPREB1P12018 145 aa10.97□□□□□ -0.65
TRIM39-201ENST00000376656 VWFP04275 2813 aa10.97□□□□□ -0.65
TRIM39-201ENST00000376656 HIGD2BQ4VC39 106 aa10.97□□□□□ -0.65
TRIM39-201ENST00000376656 PRO0628Q9UI54 55 aa10.97□□□□□ -0.65
TRIM39-201ENST00000376656 USP24Q9UPU5 2620 aa10.96□□□□□ -0.65
TRIM39-201ENST00000376656 IGKV4-1P06312 121 aa10.95□□□□□ -0.66
TRIM39-201ENST00000376656 LINC00528Q8N1L1 170 aa10.94□□□□□ -0.66
TRIM39-201ENST00000376656 HIVEP2P31629 2446 aa10.94□□□□□ -0.66
TRIM39-201ENST00000376656 CAMK2N2Q96S95 79 aa10.93□□□□□ -0.66
TRIM39-201ENST00000376656 Q8NAQ8 132 aa10.92□□□□□ -0.66
TRIM39-201ENST00000376656 M0R378 163 aa10.92□□□□□ -0.66
TRIM39-201ENST00000376656 ATP5EP56381 51 aaPredicted RBP10.92□□□□□ -0.66
TRIM39-201ENST00000376656 FAM229BQ4G0N7 80 aa10.91□□□□□ -0.66
TRIM39-201ENST00000376656 C3orf84H3BNL1 204 aa10.91□□□□□ -0.66
TRIM39-201ENST00000376656 ERC2-IT1O76042 136 aa10.91□□□□□ -0.66
TRIM39-201ENST00000376656 OCR1Q9BZK8 76 aa10.91□□□□□ -0.66
TRIM39-201ENST00000376656 Q6ZRU5 148 aa10.9□□□□□ -0.66
TRIM39-201ENST00000376656 A0A0U1RQV1 116 aa10.88□□□□□ -0.67
TRIM39-201ENST00000376656 PRYO14603 147 aa10.88□□□□□ -0.67
TRIM39-201ENST00000376656 SPART-AS1P0CW21 52 aa10.88□□□□□ -0.67
TRIM39-201ENST00000376656 APOC4P55056 127 aa10.87□□□□□ -0.67
TRIM39-201ENST00000376656 EGFEM1PQ0D2K5 195 aa10.87□□□□□ -0.67
TRIM39-201ENST00000376656 WFDC10BQ8IUB3 73 aa10.86□□□□□ -0.67
TRIM39-201ENST00000376656 DEFB105AQ8NG35 78 aa10.86□□□□□ -0.67
TRIM39-201ENST00000376656 HIGD2AQ9BW72 106 aa10.86□□□□□ -0.67
TRIM39-201ENST00000376656 PDZD2O15018 2839 aa10.85□□□□□ -0.67
TRIM39-201ENST00000376656 KRTAP26-1Q6PEX3 210 aa10.85□□□□□ -0.67
TRIM39-201ENST00000376656 MPLKIPQ8TAP9 179 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms