RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 FHL3Q13643 280 aa8□□□□□ -1.13
PTCH1-203ENST00000375274 A0A087WSZ3 146 aa8□□□□□ -1.13
PTCH1-203ENST00000375274 C10orf25Q5T742 122 aa8□□□□□ -1.13
PTCH1-203ENST00000375274 ZNF706Q9Y5V0 76 aaPredicted RBP8□□□□□ -1.13
PTCH1-203ENST00000375274 F8WDY8 70 aa7.99□□□□□ -1.13
PTCH1-203ENST00000375274 SPATA3Q8NHX4 192 aa7.99□□□□□ -1.13
PTCH1-203ENST00000375274 CENPEQ02224 2701 aa7.99□□□□□ -1.13
PTCH1-203ENST00000375274 LINC00474Q9P2X8 69 aa7.98□□□□□ -1.13
PTCH1-203ENST00000375274 M0R2N4 97 aa7.98□□□□□ -1.13
PTCH1-203ENST00000375274 TRBV7-6A0A0J9YX20 115 aa7.95□□□□□ -1.14
PTCH1-203ENST00000375274 EIF4EBP3O60516 100 aaPredicted RBP7.95□□□□□ -1.14
PTCH1-203ENST00000375274 DEFB116Q30KQ4 102 aa7.95□□□□□ -1.14
PTCH1-203ENST00000375274 C6orf48Q9UBA6 75 aa7.95□□□□□ -1.14
PTCH1-203ENST00000375274 C7orf33Q8WU49 177 aa7.95□□□□□ -1.14
PTCH1-203ENST00000375274 Q9BRP9 147 aa7.95□□□□□ -1.14
PTCH1-203ENST00000375274 BCE1O60756 84 aa7.94□□□□□ -1.14
PTCH1-203ENST00000375274 RPS28P62857 69 aaKnown RBP7.94□□□□□ -1.14
PTCH1-203ENST00000375274 X6R8D5 127 aa7.93□□□□□ -1.14
PTCH1-203ENST00000375274 KIAA0087Q14695 138 aa7.93□□□□□ -1.14
PTCH1-203ENST00000375274 ESRGQ1W209 222 aa7.93□□□□□ -1.14
PTCH1-203ENST00000375274 PRR15LQ9BU68 103 aa7.93□□□□□ -1.14
PTCH1-203ENST00000375274 LAMA3Q16787 3333 aa7.93□□□□□ -1.14
PTCH1-203ENST00000375274 Q6ZQT0 140 aa7.93□□□□□ -1.14
PTCH1-203ENST00000375274 MGAM2Q2M2H8 2515 aa7.92□□□□□ -1.14
PTCH1-203ENST00000375274 MKI67P46013 3256 aaKnown RBP7.92□□□□□ -1.14
PTCH1-203ENST00000375274 HCG22E2RYF7 251 aa7.92□□□□□ -1.14
PTCH1-203ENST00000375274 PSPHP1O15172 72 aa7.92□□□□□ -1.14
PTCH1-203ENST00000375274 C22orf24Q9Y442 160 aa7.91□□□□□ -1.14
PTCH1-203ENST00000375274 PRLHP81277 87 aa7.91□□□□□ -1.14
PTCH1-203ENST00000375274 PMAIP1Q13794 54 aa7.91□□□□□ -1.14
PTCH1-203ENST00000375274 SMCR5Q8TEV8 140 aa7.91□□□□□ -1.14
PTCH1-203ENST00000375274 HECTD1Q9ULT8 2610 aa7.9□□□□□ -1.14
PTCH1-203ENST00000375274 H0Y9P7 68 aa7.9□□□□□ -1.14
PTCH1-203ENST00000375274 ELOF1P60002 83 aaKnown RBP7.9□□□□□ -1.15
PTCH1-203ENST00000375274 LOC110117498A0A087WWA1 95 aa7.89□□□□□ -1.15
PTCH1-203ENST00000375274 LINC01556Q5JQF7 62 aa7.89□□□□□ -1.15
PTCH1-203ENST00000375274 SMIM29Q86T20 159 aa7.89□□□□□ -1.15
PTCH1-203ENST00000375274 FSHBP01225 129 aa7.89□□□□□ -1.15
PTCH1-203ENST00000375274 PCOTHQ58A44 107 aa7.89□□□□□ -1.15
PTCH1-203ENST00000375274 NHLRC4P0CG21 123 aaPredicted RBP7.88□□□□□ -1.15
PTCH1-203ENST00000375274 IGHV6-1A0A0B4J1U7 121 aa7.88□□□□□ -1.15
PTCH1-203ENST00000375274 LINC00167Q96N53 147 aa7.87□□□□□ -1.15
PTCH1-203ENST00000375274 BRCA2P51587 3418 aa7.87□□□□□ -1.15
PTCH1-203ENST00000375274 hDV103S1A0JD37 113 aa7.87□□□□□ -1.15
PTCH1-203ENST00000375274 ATRQ13535 2644 aa7.86□□□□□ -1.15
PTCH1-203ENST00000375274 PRO0628Q9UI54 55 aa7.86□□□□□ -1.15
PTCH1-203ENST00000375274 C4orf26Q17RF5 130 aa7.86□□□□□ -1.15
PTCH1-203ENST00000375274 TRANK1O15050 2925 aa7.86□□□□□ -1.15
PTCH1-203ENST00000375274 A0A1B0GW54 56 aa7.85□□□□□ -1.15
PTCH1-203ENST00000375274 TM2D3Q9BRN9 247 aa7.85□□□□□ -1.15
PTCH1-203ENST00000375274 AKAP13Q12802 2813 aa7.84□□□□□ -1.15
PTCH1-203ENST00000375274 Q8NBF4 154 aa7.84□□□□□ -1.15
PTCH1-203ENST00000375274 CIRBP-AS1Q8TBR5 109 aa7.84□□□□□ -1.15
PTCH1-203ENST00000375274 FLNAP21333 2647 aaKnown RBP7.84□□□□□ -1.16
PTCH1-203ENST00000375274 K7ERS5 55 aa7.83□□□□□ -1.16
PTCH1-203ENST00000375274 H3BNG1 76 aa7.83□□□□□ -1.16
PTCH1-203ENST00000375274 C1orf64Q8NEQ6 169 aa7.82□□□□□ -1.16
PTCH1-203ENST00000375274 MAST4O15021 2626 aa7.82□□□□□ -1.16
PTCH1-203ENST00000375274 MGAQ8IWI9 3026 aa7.82□□□□□ -1.16
PTCH1-203ENST00000375274 NUPR2A6NF83 97 aa7.82□□□□□ -1.16
PTCH1-203ENST00000375274 LY6G6CO95867 125 aa7.82□□□□□ -1.16
PTCH1-203ENST00000375274 Q8NAQ8 132 aa7.82□□□□□ -1.16
PTCH1-203ENST00000375274 IGLV6-57P01721 117 aa7.81□□□□□ -1.16
PTCH1-203ENST00000375274 Q6ZRX8 168 aa7.81□□□□□ -1.16
PTCH1-203ENST00000375274 ZNF575Q86XF7 245 aa7.81□□□□□ -1.16
PTCH1-203ENST00000375274 GVQW2A0A096LPI5 108 aaPredicted RBP7.81□□□□□ -1.16
PTCH1-203ENST00000375274 CSNK1G2-AS1Q8NCQ2 148 aa7.8□□□□□ -1.16
PTCH1-203ENST00000375274 VPREB1P12018 145 aa7.8□□□□□ -1.16
PTCH1-203ENST00000375274 WDFY4Q6ZS81 3184 aa7.79□□□□□ -1.16
PTCH1-203ENST00000375274 ITPR3Q14573 2671 aa7.78□□□□□ -1.16
PTCH1-203ENST00000375274 LINC00476Q8WZB0 136 aa7.78□□□□□ -1.16
PTCH1-203ENST00000375274 UNC80Q8N2C7 3258 aa7.77□□□□□ -1.16
PTCH1-203ENST00000375274 Q6ZRP5 223 aa7.77□□□□□ -1.17
PTCH1-203ENST00000375274 PRUNE2Q8WUY3 3088 aa7.77□□□□□ -1.17
PTCH1-203ENST00000375274 LIMD2Q9BT23 127 aa7.77□□□□□ -1.17
PTCH1-203ENST00000375274 ST20-AS1Q8NBB2 130 aa7.76□□□□□ -1.17
PTCH1-203ENST00000375274 IGLV5-52A0A0A0MRZ9 124 aa7.76□□□□□ -1.17
PTCH1-203ENST00000375274 GIG44P09565 113 aaPredicted RBP7.76□□□□□ -1.17
PTCH1-203ENST00000375274 MAP1AP78559 2803 aaPredicted RBP7.75□□□□□ -1.17
PTCH1-203ENST00000375274 A0A096LNT2 108 aa7.73□□□□□ -1.17
PTCH1-203ENST00000375274 LINC00528Q8N1L1 170 aa7.73□□□□□ -1.17
PTCH1-203ENST00000375274 CHD6Q8TD26 2715 aa7.73□□□□□ -1.17
PTCH1-203ENST00000375274 RETNLBQ9BQ08 111 aa7.72□□□□□ -1.17
PTCH1-203ENST00000375274 C19orf73Q9NVV2 129 aa7.72□□□□□ -1.17
PTCH1-203ENST00000375274 C9orf129Q5T035 196 aaKnown RBP7.72□□□□□ -1.17
PTCH1-203ENST00000375274 VPS13AQ96RL7 3174 aa7.72□□□□□ -1.17
PTCH1-203ENST00000375274 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
PTCH1-203ENST00000375274 CFAP46Q8IYW2 2715 aa7.72□□□□□ -1.17
PTCH1-203ENST00000375274 KLKP1Q107X0 134 aa7.71□□□□□ -1.17
PTCH1-203ENST00000375274 PRR34Q9NV39 138 aa7.71□□□□□ -1.17
PTCH1-203ENST00000375274 TRIOO75962 3097 aa7.71□□□□□ -1.18
PTCH1-203ENST00000375274 TRBV7-4A0A0J9YYF1 115 aa7.71□□□□□ -1.18
PTCH1-203ENST00000375274 XIRP2A4UGR9 3374 aa7.71□□□□□ -1.18
PTCH1-203ENST00000375274 H3BPC8 53 aa7.7□□□□□ -1.18
PTCH1-203ENST00000375274 ERC2-IT1O76042 136 aa7.7□□□□□ -1.18
PTCH1-203ENST00000375274 TRAV22A0A0B4J277 110 aa7.7□□□□□ -1.18
PTCH1-203ENST00000375274 LINC00588Q9Y4M8 146 aa7.7□□□□□ -1.18
PTCH1-203ENST00000375274 PHF5AQ7RTV0 110 aaKnown RBP7.69□□□□□ -1.18
PTCH1-203ENST00000375274 KCNQ1DNQ9H478 68 aa7.69□□□□□ -1.18
PTCH1-203ENST00000375274 ZNF292O60281 2723 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms