RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 H7BZZ5 65 aa5.7□□□□□ -1.5
UBR4-202ENST00000375224 IGKV3OR2-268A0A0C4DH90 116 aa5.69□□□□□ -1.5
UBR4-202ENST00000375224 C11orf68Q9H3H3 251 aaKnown RBP5.69□□□□□ -1.5
UBR4-202ENST00000375224 A0A087WZ39 114 aa5.69□□□□□ -1.5
UBR4-202ENST00000375224 IGHV3OR16-9A0A0B4J2B5 98 aa5.69□□□□□ -1.5
UBR4-202ENST00000375224 LINC00959A0A1B0GUT2 108 aa5.69□□□□□ -1.5
UBR4-202ENST00000375224 NIPBLQ6KC79 2804 aaeCLIP5.69□□□□□ -1.52e-7■■□□□ 12.5
UBR4-202ENST00000375224 DEFB4AO15263 64 aa5.69□□□□□ -1.5
UBR4-202ENST00000375224 PRR15Q8IV56 129 aa5.69□□□□□ -1.5
UBR4-202ENST00000375224 LINC00308Q8TCZ7 52 aa5.69□□□□□ -1.5
UBR4-202ENST00000375224 NDUFC1O43677 76 aa5.68□□□□□ -1.5
UBR4-202ENST00000375224 SNURFQ9Y675 71 aa5.68□□□□□ -1.5
UBR4-202ENST00000375224 KRTAP24-1Q3LI83 254 aa5.68□□□□□ -1.5
UBR4-202ENST00000375224 C14orf132Q9NPU4 83 aa5.68□□□□□ -1.5
UBR4-202ENST00000375224 LINC00846Q9NV44 126 aa5.67□□□□□ -1.5
UBR4-202ENST00000375224 ATRQ13535 2644 aa5.67□□□□□ -1.5
UBR4-202ENST00000375224 TRAV7A0A075B6U4 112 aa5.67□□□□□ -1.5
UBR4-202ENST00000375224 TOMM7Q9P0U1 55 aa5.67□□□□□ -1.5
UBR4-202ENST00000375224 CELA1Q9UNI1 258 aa5.67□□□□□ -1.5
UBR4-202ENST00000375224 A0A096LPF7 62 aa5.67□□□□□ -1.5
UBR4-202ENST00000375224 EGFEM1PQ0D2K5 195 aa5.67□□□□□ -1.5
UBR4-202ENST00000375224 Q6ZRU5 148 aa5.67□□□□□ -1.5
UBR4-202ENST00000375224 F8P00451 2351 aa5.66□□□□□ -1.5
UBR4-202ENST00000375224 ATP5EP2Q5VTU8 51 aa5.66□□□□□ -1.5
UBR4-202ENST00000375224 OXLD1Q5BKU9 147 aa5.66□□□□□ -1.5
UBR4-202ENST00000375224 LELP1Q5T871 98 aa5.66□□□□□ -1.5
UBR4-202ENST00000375224 IBA57-AS1B1ANH7 110 aa5.65□□□□□ -1.5
UBR4-202ENST00000375224 LYPD5Q6UWN5 251 aa5.65□□□□□ -1.5
UBR4-202ENST00000375224 CYSRT1A8MQ03 144 aa5.65□□□□□ -1.5
UBR4-202ENST00000375224 RMI2Q96E14 147 aa5.65□□□□□ -1.5
UBR4-202ENST00000375224 HTN3P15516 51 aa5.65□□□□□ -1.51
UBR4-202ENST00000375224 ENHOQ6UWT2 76 aa5.65□□□□□ -1.51
UBR4-202ENST00000375224 RPL28P46779 137 aaKnown RBP5.64□□□□□ -1.51
UBR4-202ENST00000375224 CD164L2Q6UWJ8 174 aa5.64□□□□□ -1.51
UBR4-202ENST00000375224 Q8IZM0 81 aa5.64□□□□□ -1.51
UBR4-202ENST00000375224 Q9HAA7 133 aa5.64□□□□□ -1.51
UBR4-202ENST00000375224 H3BNG1 76 aa5.64□□□□□ -1.51
UBR4-202ENST00000375224 ANGP03950 147 aaKnown RBP5.64□□□□□ -1.51
UBR4-202ENST00000375224 KRTAP10-11P60412 298 aa5.64□□□□□ -1.51
UBR4-202ENST00000375224 LINC00158P58513 81 aa5.64□□□□□ -1.51
UBR4-202ENST00000375224 KLKP1Q107X0 134 aa5.64□□□□□ -1.51
UBR4-202ENST00000375224 LINC00269Q8N2A0 174 aa5.64□□□□□ -1.51
UBR4-202ENST00000375224 UBL5Q9BZL1 73 aa5.64□□□□□ -1.51
UBR4-202ENST00000375224 TENM1Q9UKZ4 2725 aa5.63□□□□□ -1.51
UBR4-202ENST00000375224 TRAV13-2A0A0B4J235 113 aa5.63□□□□□ -1.51
UBR4-202ENST00000375224 REG3AQ06141 175 aa5.63□□□□□ -1.51
UBR4-202ENST00000375224 VWFP04275 2813 aa5.63□□□□□ -1.51
UBR4-202ENST00000375224 MIR7-3HGQ8N6C7 128 aa5.63□□□□□ -1.51
UBR4-202ENST00000375224 CHCHD10Q8WYQ3 142 aaPredicted RBP5.62□□□□□ -1.51
UBR4-202ENST00000375224 ESRGQ1W209 222 aa5.62□□□□□ -1.51
UBR4-202ENST00000375224 CLPSL2Q6UWE3 100 aa5.62□□□□□ -1.51
UBR4-202ENST00000375224 RBM12B-AS1Q9P1G2 102 aa5.61□□□□□ -1.51
UBR4-202ENST00000375224 CRPP02741 224 aa5.61□□□□□ -1.51
UBR4-202ENST00000375224 SND1-IT1Q9HBX3 110 aa5.61□□□□□ -1.51
UBR4-202ENST00000375224 H3BS24 57 aa5.6□□□□□ -1.51
UBR4-202ENST00000375224 BCE1O60756 84 aa5.6□□□□□ -1.51
UBR4-202ENST00000375224 COX17Q14061 63 aa5.6□□□□□ -1.51
UBR4-202ENST00000375224 C11orf45Q8TAV5 145 aa5.6□□□□□ -1.51
UBR4-202ENST00000375224 NBEAL2Q6ZNJ1 2754 aa5.59□□□□□ -1.51
UBR4-202ENST00000375224 CCL18P55774 89 aa5.59□□□□□ -1.51
UBR4-202ENST00000375224 KPRPQ5T749 579 aaPredicted RBP5.59□□□□□ -1.51
UBR4-202ENST00000375224 PRR34Q9NV39 138 aa5.59□□□□□ -1.51
UBR4-202ENST00000375224 MUC7Q8TAX7 377 aa5.58□□□□□ -1.52
UBR4-202ENST00000375224 IGLV10-54A0A075B6I4 117 aa5.58□□□□□ -1.52
UBR4-202ENST00000375224 TRBV10-3A0A0K0K1G6 114 aa5.58□□□□□ -1.52
UBR4-202ENST00000375224 KIAA0087Q14695 138 aa5.58□□□□□ -1.52
UBR4-202ENST00000375224 KLK12Q9UKR0 248 aa5.58□□□□□ -1.52
UBR4-202ENST00000375224 NCR3O14931 201 aa5.57□□□□□ -1.52
UBR4-202ENST00000375224 FUSP35637 526 aaKnown RBP eCLIP5.57□□□□□ -1.52
UBR4-202ENST00000375224 KTN1-AS1Q86SY8 53 aa5.57□□□□□ -1.52
UBR4-202ENST00000375224 Q6ZTC4 211 aa5.57□□□□□ -1.52
UBR4-202ENST00000375224 C6orf223Q8N319 242 aa5.57□□□□□ -1.52
UBR4-202ENST00000375224 Q8N3U1 123 aa5.57□□□□□ -1.52
UBR4-202ENST00000375224 IGKV2-28A0A075B6P5 120 aa5.56□□□□□ -1.52
UBR4-202ENST00000375224 IGKV2D-28P01615 120 aa5.56□□□□□ -1.52
UBR4-202ENST00000375224 HAMPP81172 84 aa5.56□□□□□ -1.52
UBR4-202ENST00000375224 A0A0J9YWU9 116 aa5.56□□□□□ -1.52
UBR4-202ENST00000375224 LINC00337Q8N6G1 96 aa5.56□□□□□ -1.52
UBR4-202ENST00000375224 H0YGX0 51 aa5.55□□□□□ -1.52
UBR4-202ENST00000375224 SPAG11BQ08648 103 aa5.55□□□□□ -1.52
UBR4-202ENST00000375224 FAM229BQ4G0N7 80 aa5.55□□□□□ -1.52
UBR4-202ENST00000375224 DEFB131BA0A096LNP1 70 aa5.55□□□□□ -1.52
UBR4-202ENST00000375224 FAM218AQ96MZ4 157 aa5.55□□□□□ -1.52
UBR4-202ENST00000375224 TRRAPQ9Y4A5 3859 aa5.55□□□□□ -1.52
UBR4-202ENST00000375224 PSPHP1O15172 72 aa5.55□□□□□ -1.52
UBR4-202ENST00000375224 UBE2BP63146 152 aa5.55□□□□□ -1.52
UBR4-202ENST00000375224 SPTSSBQ8NFR3 76 aa5.54□□□□□ -1.52
UBR4-202ENST00000375224 ORMDL1Q9P0S3 153 aa5.54□□□□□ -1.52
UBR4-202ENST00000375224 JMJD7-PLA2G4BH0Y9G9 81 aa5.54□□□□□ -1.52
UBR4-202ENST00000375224 TMEM256-PLSCR3K7ERE1 68 aa5.53□□□□□ -1.52
UBR4-202ENST00000375224 LECT2O14960 151 aa5.53□□□□□ -1.52
UBR4-202ENST00000375224 NDUFS5O43920 106 aa5.53□□□□□ -1.52
UBR4-202ENST00000375224 NANOS2P60321 138 aaKnown RBP5.53□□□□□ -1.52
UBR4-202ENST00000375224 SMIM11BQ8TCY0 68 aa5.53□□□□□ -1.52
UBR4-202ENST00000375224 TM2D3Q9BRN9 247 aa5.53□□□□□ -1.52
UBR4-202ENST00000375224 GVQW2A0A096LPI5 108 aaPredicted RBP5.53□□□□□ -1.52
UBR4-202ENST00000375224 LRCOL1A6NCL2 159 aa5.53□□□□□ -1.52
UBR4-202ENST00000375224 WFDC10BQ8IUB3 73 aa5.53□□□□□ -1.52
UBR4-202ENST00000375224 C22orf24Q9Y442 160 aa5.53□□□□□ -1.52
UBR4-202ENST00000375224 TRAV10A0A0B4J240 114 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms