RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 J3QQQ9 107 aa12.9□□□□□ -0.34
MAP1LC3A-202ENST00000374837 HERV-K104P63124 156 aa12.9□□□□□ -0.34
MAP1LC3A-202ENST00000374837 UBR4Q5T4S7 5183 aa12.89□□□□□ -0.35
MAP1LC3A-202ENST00000374837 OXTP01178 125 aa12.89□□□□□ -0.35
MAP1LC3A-202ENST00000374837 SMIM13P0DJ93 91 aa12.89□□□□□ -0.35
MAP1LC3A-202ENST00000374837 KRTDAPP60985 99 aa12.89□□□□□ -0.35
MAP1LC3A-202ENST00000374837 MRPL55Q7Z7F7 128 aaKnown RBP12.89□□□□□ -0.35
MAP1LC3A-202ENST00000374837 IGLV5-37A0A075B6J1 123 aa12.88□□□□□ -0.35
MAP1LC3A-202ENST00000374837 MEIG1Q5JSS6 88 aa12.88□□□□□ -0.35
MAP1LC3A-202ENST00000374837 SPINK6Q6UWN8 80 aa12.88□□□□□ -0.35
MAP1LC3A-202ENST00000374837 LINC00167Q96N53 147 aa12.87□□□□□ -0.35
MAP1LC3A-202ENST00000374837 E9PLD3 99 aa12.86□□□□□ -0.35
MAP1LC3A-202ENST00000374837 LGALS3P17931 250 aaKnown RBP12.86□□□□□ -0.35
MAP1LC3A-202ENST00000374837 LRP1Q07954 4544 aaKnown RBP12.86□□□□□ -0.35
MAP1LC3A-202ENST00000374837 FAT3Q8TDW7 4589 aa12.85□□□□□ -0.35
MAP1LC3A-202ENST00000374837 LINC00587B1AMM8 73 aa12.85□□□□□ -0.35
MAP1LC3A-202ENST00000374837 IGLV7-43P04211 117 aa12.85□□□□□ -0.35
MAP1LC3A-202ENST00000374837 NKAPP1Q8N9T2 125 aa12.85□□□□□ -0.35
MAP1LC3A-202ENST00000374837 VPREB1P12018 145 aa12.84□□□□□ -0.35
MAP1LC3A-202ENST00000374837 NMUP48645 174 aa12.84□□□□□ -0.35
MAP1LC3A-202ENST00000374837 HIST3H2BBQ8N257 126 aa12.84□□□□□ -0.35
MAP1LC3A-202ENST00000374837 GAGE10A6NGK3 116 aa12.83□□□□□ -0.36
MAP1LC3A-202ENST00000374837 RPL37AP8A6NKH3 93 aa12.83□□□□□ -0.36
MAP1LC3A-202ENST00000374837 MIR7-3HGQ8N6C7 128 aa12.83□□□□□ -0.36
MAP1LC3A-202ENST00000374837 Q8NDZ9 215 aa12.83□□□□□ -0.36
MAP1LC3A-202ENST00000374837 RPL24P83731 157 aaKnown RBP12.82□□□□□ -0.36
MAP1LC3A-202ENST00000374837 C20orf202A1L168 122 aa12.8□□□□□ -0.36
MAP1LC3A-202ENST00000374837 S100A6P06703 90 aa12.8□□□□□ -0.36
MAP1LC3A-202ENST00000374837 S100A2P29034 98 aa12.8□□□□□ -0.36
MAP1LC3A-202ENST00000374837 HIST1H2BLQ99880 126 aa12.8□□□□□ -0.36
MAP1LC3A-202ENST00000374837 IGKV2D-26A0A0A0MRZ7 120 aa12.76□□□□□ -0.37
MAP1LC3A-202ENST00000374837 A0A0J9YXY3 114 aa12.76□□□□□ -0.37
MAP1LC3A-202ENST00000374837 REG3GQ6UW15 175 aa12.76□□□□□ -0.37
MAP1LC3A-202ENST00000374837 BOD1L2Q8IYS8 172 aa12.76□□□□□ -0.37
MAP1LC3A-202ENST00000374837 DAND5Q8N907 189 aa12.76□□□□□ -0.37
MAP1LC3A-202ENST00000374837 IGKV2-28A0A075B6P5 120 aa12.75□□□□□ -0.37
MAP1LC3A-202ENST00000374837 IGKV2D-28P01615 120 aa12.75□□□□□ -0.37
MAP1LC3A-202ENST00000374837 SNRPEP62304 92 aaKnown RBP12.75□□□□□ -0.37
MAP1LC3A-202ENST00000374837 DIRC1Q969H9 104 aa12.75□□□□□ -0.37
MAP1LC3A-202ENST00000374837 IGLV1-50A0A075B6I6 118 aa12.74□□□□□ -0.37
MAP1LC3A-202ENST00000374837 BCE1O60756 84 aa12.74□□□□□ -0.37
MAP1LC3A-202ENST00000374837 MT1HL1P0DM35 61 aa12.74□□□□□ -0.37
MAP1LC3A-202ENST00000374837 ATOH7Q8N100 152 aa12.74□□□□□ -0.37
MAP1LC3A-202ENST00000374837 LINC01600Q96MT4 127 aa12.74□□□□□ -0.37
MAP1LC3A-202ENST00000374837 ZNF861PO60384 105 aa12.73□□□□□ -0.37
MAP1LC3A-202ENST00000374837 LOC107984156A0A0G2JMH3 177 aa12.72□□□□□ -0.37
MAP1LC3A-202ENST00000374837 M0R378 163 aa12.72□□□□□ -0.37
MAP1LC3A-202ENST00000374837 ARL17AQ8IVW1 177 aa12.72□□□□□ -0.37
MAP1LC3A-202ENST00000374837 TTTY13Q9BZ97 58 aa12.72□□□□□ -0.37
MAP1LC3A-202ENST00000374837 H0Y9J4 135 aa12.71□□□□□ -0.37
MAP1LC3A-202ENST00000374837 AKR1D1P51857 326 aa12.71□□□□□ -0.37
MAP1LC3A-202ENST00000374837 ANKRD39Q53RE8 183 aa12.71□□□□□ -0.37
MAP1LC3A-202ENST00000374837 ADAMTSL4-AS1Q5T5F5 129 aa12.71□□□□□ -0.37
MAP1LC3A-202ENST00000374837 C5orf52A6NGY3 159 aa12.7□□□□□ -0.38
MAP1LC3A-202ENST00000374837 ZNF815PA8K554 130 aa12.7□□□□□ -0.38
MAP1LC3A-202ENST00000374837 HMCN2Q8NDA2 5059 aa12.69□□□□□ -0.38
MAP1LC3A-202ENST00000374837 TMEM238C9JI98 176 aa12.68□□□□□ -0.38
MAP1LC3A-202ENST00000374837 NCR3O14931 201 aa12.68□□□□□ -0.38
MAP1LC3A-202ENST00000374837 RPL28P46779 137 aaKnown RBP12.67□□□□□ -0.38
MAP1LC3A-202ENST00000374837 LITAFQ99732 161 aa12.67□□□□□ -0.38
MAP1LC3A-202ENST00000374837 TMEM126AQ9H061 195 aa12.67□□□□□ -0.38
MAP1LC3A-202ENST00000374837 SOSTDC1Q6X4U4 206 aa12.66□□□□□ -0.38
MAP1LC3A-202ENST00000374837 EIF4EBP3O60516 100 aaPredicted RBP12.65□□□□□ -0.38
MAP1LC3A-202ENST00000374837 TIMM17BO60830 172 aa12.65□□□□□ -0.38
MAP1LC3A-202ENST00000374837 KRTAP10-8P60410 259 aa12.65□□□□□ -0.38
MAP1LC3A-202ENST00000374837 NPC2P61916 151 aa12.65□□□□□ -0.38
MAP1LC3A-202ENST00000374837 MIEN1Q9BRT3 115 aa12.65□□□□□ -0.38
MAP1LC3A-202ENST00000374837 UBE2AP49459 152 aa12.64□□□□□ -0.39
MAP1LC3A-202ENST00000374837 KRTAP13-1Q8IUC0 172 aa12.64□□□□□ -0.39
MAP1LC3A-202ENST00000374837 KRTAP1-4P0C5Y4 121 aa12.62□□□□□ -0.39
MAP1LC3A-202ENST00000374837 FAM19A1Q7Z5A9 133 aa12.62□□□□□ -0.39
MAP1LC3A-202ENST00000374837 TRBV10-3A0A0K0K1G6 114 aa12.61□□□□□ -0.39
MAP1LC3A-202ENST00000374837 TRBV10-2A0A0K0K1G8 114 aa12.61□□□□□ -0.39
MAP1LC3A-202ENST00000374837 NDUFC2O95298 119 aa12.61□□□□□ -0.39
MAP1LC3A-202ENST00000374837 PCP2Q8IVA1 136 aa12.61□□□□□ -0.39
MAP1LC3A-202ENST00000374837 LINC00308Q8TCZ7 52 aa12.61□□□□□ -0.39
MAP1LC3A-202ENST00000374837 KCNQ1DNQ9H478 68 aa12.6□□□□□ -0.39
MAP1LC3A-202ENST00000374837 SPANXB1Q9NS25 103 aaPredicted RBP12.6□□□□□ -0.39
MAP1LC3A-202ENST00000374837 PRYO14603 147 aa12.59□□□□□ -0.39
MAP1LC3A-202ENST00000374837 PRLHP81277 87 aa12.59□□□□□ -0.39
MAP1LC3A-202ENST00000374837 SCGB1D4Q6XE38 83 aa12.59□□□□□ -0.39
MAP1LC3A-202ENST00000374837 TNXBP22105 4242 aa12.59□□□□□ -0.39
MAP1LC3A-202ENST00000374837 SCGB1D1O95968 90 aa12.58□□□□□ -0.4
MAP1LC3A-202ENST00000374837 PRR26Q8N8Z3 221 aa12.58□□□□□ -0.4
MAP1LC3A-202ENST00000374837 HSBP1L1C9JCN9 74 aa12.56□□□□□ -0.4
MAP1LC3A-202ENST00000374837 DDTP30046 118 aa12.56□□□□□ -0.4
MAP1LC3A-202ENST00000374837 SPRR1AP35321 89 aa12.55□□□□□ -0.4
MAP1LC3A-202ENST00000374837 SPANXDQ9BXN6 97 aa12.54□□□□□ -0.4
MAP1LC3A-202ENST00000374837 SPANXCQ9NY87 97 aa12.54□□□□□ -0.4
MAP1LC3A-202ENST00000374837 IGLV6-57P01721 117 aa12.53□□□□□ -0.4
MAP1LC3A-202ENST00000374837 S100A7L2Q5SY68 101 aa12.53□□□□□ -0.4
MAP1LC3A-202ENST00000374837 LINC00337Q8N6G1 96 aa12.53□□□□□ -0.4
MAP1LC3A-202ENST00000374837 KRTAP4-16G5E9R7 235 aaPredicted RBP12.52□□□□□ -0.41
MAP1LC3A-202ENST00000374837 S100A12P80511 92 aa12.52□□□□□ -0.41
MAP1LC3A-202ENST00000374837 HIGD2AQ9BW72 106 aa12.5□□□□□ -0.41
MAP1LC3A-202ENST00000374837 ETDCA0A1B0GVM5 59 aa12.49□□□□□ -0.41
MAP1LC3A-202ENST00000374837 IFITM1P13164 125 aa12.48□□□□□ -0.41
MAP1LC3A-202ENST00000374837 Q6ZVH6 145 aa12.48□□□□□ -0.41
MAP1LC3A-202ENST00000374837 ANAPC11Q9NYG5 84 aa12.48□□□□□ -0.41
MAP1LC3A-202ENST00000374837 MUSTN1Q8IVN3 82 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms