RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CSMD2Q7Z408 3487 aa8.86□□□□□ -0.99
NPLOC4-202ENST00000374747 ZFHX3Q15911 3703 aa8.86□□□□□ -0.99
NPLOC4-202ENST00000374747 TSPEAR-AS2P59090 65 aa8.86□□□□□ -0.99
NPLOC4-202ENST00000374747 SOSTDC1Q6X4U4 206 aa8.86□□□□□ -0.99
NPLOC4-202ENST00000374747 C16orf95Q9H693 158 aa8.86□□□□□ -0.99
NPLOC4-202ENST00000374747 WFDC10AQ9H1F0 79 aa8.85□□□□□ -0.99
NPLOC4-202ENST00000374747 DOPEY1Q5JWR5 2465 aa8.84□□□□□ -0.99
NPLOC4-202ENST00000374747 PRYO14603 147 aa8.84□□□□□ -0.99
NPLOC4-202ENST00000374747 IGSF10Q6WRI0 2623 aa8.84□□□□□ -0.99
NPLOC4-202ENST00000374747 A0A087WYN8 130 aa8.84□□□□□ -0.99
NPLOC4-202ENST00000374747 PMAIP1Q13794 54 aa8.84□□□□□ -0.99
NPLOC4-202ENST00000374747 ACANP16112 2415 aa8.84□□□□□ -0.99
NPLOC4-202ENST00000374747 LINC00208Q96KT6 92 aa8.83□□□□□ -1
NPLOC4-202ENST00000374747 CHCHD7Q9BUK0 85 aa8.83□□□□□ -1
NPLOC4-202ENST00000374747 IGLV9-49A0A0B4J1Y8 123 aa8.82□□□□□ -1
NPLOC4-202ENST00000374747 C1orf137Q5JT78 98 aa8.82□□□□□ -1
NPLOC4-202ENST00000374747 UNQ6190/PRO20217Q6UXQ8 127 aa8.82□□□□□ -1
NPLOC4-202ENST00000374747 IGHV4-30-4P0DP06 118 aa8.82□□□□□ -1
NPLOC4-202ENST00000374747 EGFEM1PQ0D2K5 195 aa8.82□□□□□ -1
NPLOC4-202ENST00000374747 ADAMTSL4-AS1Q5T5F5 129 aa8.82□□□□□ -1
NPLOC4-202ENST00000374747 Q8N3U1 123 aa8.82□□□□□ -1
NPLOC4-202ENST00000374747 A0A096LNJ9 63 aa8.82□□□□□ -1
NPLOC4-202ENST00000374747 PLAC8L1A1L4L8 177 aa8.82□□□□□ -1
NPLOC4-202ENST00000374747 TRBV10-3A0A0K0K1G6 114 aa8.82□□□□□ -1
NPLOC4-202ENST00000374747 AGRNO00468 2067 aa8.81□□□□□ -1
NPLOC4-202ENST00000374747 COX6A2Q02221 97 aa8.81□□□□□ -1
NPLOC4-202ENST00000374747 C10orf25Q5T742 122 aa8.81□□□□□ -1
NPLOC4-202ENST00000374747 COX8CQ7Z4L0 72 aa8.81□□□□□ -1
NPLOC4-202ENST00000374747 TEX15Q9BXT5 2789 aa8.81□□□□□ -1
NPLOC4-202ENST00000374747 AMELXQ99217 191 aa8.81□□□□□ -1
NPLOC4-202ENST00000374747 ODF3L2Q3SX64 289 aa8.8□□□□□ -1
NPLOC4-202ENST00000374747 EDN2P20800 178 aa8.8□□□□□ -1
NPLOC4-202ENST00000374747 IGLV1-51P01701 117 aa8.8□□□□□ -1
NPLOC4-202ENST00000374747 ANKRD17O75179 2603 aaKnown RBP8.79□□□□□ -1
NPLOC4-202ENST00000374747 LINC00474Q9P2X8 69 aa8.79□□□□□ -1
NPLOC4-202ENST00000374747 C9orf116Q5BN46 136 aaPredicted RBP8.79□□□□□ -1
NPLOC4-202ENST00000374747 CSDC2Q9Y534 153 aaKnown RBP8.79□□□□□ -1
NPLOC4-202ENST00000374747 IGLV2-18A0A075B6J9 118 aa8.78□□□□□ -1
NPLOC4-202ENST00000374747 TRBV7-7A0A0K0K1E9 115 aa8.78□□□□□ -1
NPLOC4-202ENST00000374747 ESRGQ1W209 222 aa8.78□□□□□ -1
NPLOC4-202ENST00000374747 CHD6Q8TD26 2715 aa8.77□□□□□ -1
NPLOC4-202ENST00000374747 PRR3P79522 188 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-202ENST00000374747 NANOS2P60321 138 aaKnown RBP8.76□□□□□ -1.01
NPLOC4-202ENST00000374747 IGLV4-60A0A075B6I1 120 aa8.76□□□□□ -1.01
NPLOC4-202ENST00000374747 Q8N2B8 174 aa8.76□□□□□ -1.01
NPLOC4-202ENST00000374747 FN1P02751 2386 aaKnown RBP8.76□□□□□ -1.01
NPLOC4-202ENST00000374747 TRBV7-6A0A0J9YX20 115 aa8.76□□□□□ -1.01
NPLOC4-202ENST00000374747 LINC01547P58512 204 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-202ENST00000374747 LINC00575Q6W349 94 aa8.75□□□□□ -1.01
NPLOC4-202ENST00000374747 TMEM254Q8TBM7 123 aa8.75□□□□□ -1.01
NPLOC4-202ENST00000374747 PSPHP1O15172 72 aa8.74□□□□□ -1.01
NPLOC4-202ENST00000374747 REG3GQ6UW15 175 aa8.74□□□□□ -1.01
NPLOC4-202ENST00000374747 Q6ZVQ6 151 aa8.74□□□□□ -1.01
NPLOC4-202ENST00000374747 LINC00846Q9NV44 126 aa8.74□□□□□ -1.01
NPLOC4-202ENST00000374747 CDIP1Q9H305 208 aa8.73□□□□□ -1.01
NPLOC4-202ENST00000374747 FASNP49327 2511 aaKnown RBP8.73□□□□□ -1.01
NPLOC4-202ENST00000374747 OXLD1Q5BKU9 147 aa8.73□□□□□ -1.01
NPLOC4-202ENST00000374747 M0R2N4 97 aa8.72□□□□□ -1.01
NPLOC4-202ENST00000374747 C6orf223Q8N319 242 aa8.71□□□□□ -1.01
NPLOC4-202ENST00000374747 FHL2Q14192 279 aa8.71□□□□□ -1.02
NPLOC4-202ENST00000374747 IGHV6-1A0A0B4J1U7 121 aa8.7□□□□□ -1.02
NPLOC4-202ENST00000374747 BEAN1Q3B7T3 259 aa8.7□□□□□ -1.02
NPLOC4-202ENST00000374747 H0Y9P7 68 aa8.7□□□□□ -1.02
NPLOC4-202ENST00000374747 PCOTHQ58A44 107 aa8.7□□□□□ -1.02
NPLOC4-202ENST00000374747 A0A087WSZ3 146 aa8.68□□□□□ -1.02
NPLOC4-202ENST00000374747 A0A1B0GUV1 79 aa8.68□□□□□ -1.02
NPLOC4-202ENST00000374747 F8WDY8 70 aa8.68□□□□□ -1.02
NPLOC4-202ENST00000374747 CXCL6P80162 114 aa8.68□□□□□ -1.02
NPLOC4-202ENST00000374747 LINC01561Q8N1V8 128 aa8.67□□□□□ -1.02
NPLOC4-202ENST00000374747 Q9BRP9 147 aa8.67□□□□□ -1.02
NPLOC4-202ENST00000374747 Q6ZSN1 163 aa8.67□□□□□ -1.02
NPLOC4-202ENST00000374747 HCG22E2RYF7 251 aa8.67□□□□□ -1.02
NPLOC4-202ENST00000374747 LINC00337Q8N6G1 96 aa8.67□□□□□ -1.02
NPLOC4-202ENST00000374747 hDV103S1A0JD37 113 aa8.67□□□□□ -1.02
NPLOC4-202ENST00000374747 CIRBP-AS1Q8TBR5 109 aa8.65□□□□□ -1.02
NPLOC4-202ENST00000374747 C2orf48Q96LS8 159 aa8.65□□□□□ -1.02
NPLOC4-202ENST00000374747 PRO0628Q9UI54 55 aa8.65□□□□□ -1.02
NPLOC4-202ENST00000374747 RETNQ9HD89 108 aa8.65□□□□□ -1.03
NPLOC4-202ENST00000374747 NBEAL2Q6ZNJ1 2754 aa8.65□□□□□ -1.03
NPLOC4-202ENST00000374747 FSHBP01225 129 aa8.64□□□□□ -1.03
NPLOC4-202ENST00000374747 ZNF575Q86XF7 245 aa8.64□□□□□ -1.03
NPLOC4-202ENST00000374747 LINC01546A6NGU7 62 aa8.64□□□□□ -1.03
NPLOC4-202ENST00000374747 CRYGAP11844 174 aa8.63□□□□□ -1.03
NPLOC4-202ENST00000374747 A8MTW9 85 aa8.63□□□□□ -1.03
NPLOC4-202ENST00000374747 KLK9Q2XQG4 91 aa8.63□□□□□ -1.03
NPLOC4-202ENST00000374747 FLNAP21333 2647 aaKnown RBP8.63□□□□□ -1.03
NPLOC4-202ENST00000374747 ITPR3Q14573 2671 aa8.63□□□□□ -1.03
NPLOC4-202ENST00000374747 ITPR2Q14571 2701 aa8.63□□□□□ -1.03
NPLOC4-202ENST00000374747 DEFB116Q30KQ4 102 aa8.62□□□□□ -1.03
NPLOC4-202ENST00000374747 KIF25-AS1Q9Y6Z4 181 aa8.62□□□□□ -1.03
NPLOC4-202ENST00000374747 USP24Q9UPU5 2620 aa8.62□□□□□ -1.03
NPLOC4-202ENST00000374747 IGLV5-39A0A0G2JS06 123 aa8.62□□□□□ -1.03
NPLOC4-202ENST00000374747 LY6G6CO95867 125 aa8.61□□□□□ -1.03
NPLOC4-202ENST00000374747 LIMD2Q9BT23 127 aa8.61□□□□□ -1.03
NPLOC4-202ENST00000374747 FHL3Q13643 280 aa8.61□□□□□ -1.03
NPLOC4-202ENST00000374747 SMCPP49901 116 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-202ENST00000374747 Q6ZTC4 211 aa8.6□□□□□ -1.03
NPLOC4-202ENST00000374747 C1orf64Q8NEQ6 169 aa8.59□□□□□ -1.03
NPLOC4-202ENST00000374747 BCE1O60756 84 aa8.59□□□□□ -1.03
NPLOC4-202ENST00000374747 SPINK1P00995 79 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms