RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 HIST1H4AP62805 103 aaKnown RBP7.49□□□□□ -1.21
CXCL12-203ENST00000374429 A0A0B4J2C4 111 aa7.49□□□□□ -1.21
CXCL12-203ENST00000374429 NDUFA1O15239 70 aa7.49□□□□□ -1.21
CXCL12-203ENST00000374429 DNAL4O96015 105 aa7.49□□□□□ -1.21
CXCL12-203ENST00000374429 RPL18AQ02543 176 aaKnown RBP7.49□□□□□ -1.21
CXCL12-203ENST00000374429 SMCR5Q8TEV8 140 aa7.49□□□□□ -1.21
CXCL12-203ENST00000374429 TIRAPP58753 221 aa7.48□□□□□ -1.21
CXCL12-203ENST00000374429 IGKV2D-24A0A075B6R9 120 aa7.48□□□□□ -1.21
CXCL12-203ENST00000374429 KRTAP10-11P60412 298 aa7.48□□□□□ -1.21
CXCL12-203ENST00000374429 UNQ6190/PRO20217Q6UXQ8 127 aa7.48□□□□□ -1.21
CXCL12-203ENST00000374429 WFDC10BQ8IUB3 73 aa7.48□□□□□ -1.21
CXCL12-203ENST00000374429 LINC01561Q8N1V8 128 aa7.48□□□□□ -1.21
CXCL12-203ENST00000374429 COX7A2LO14548 114 aa7.47□□□□□ -1.21
CXCL12-203ENST00000374429 OVOL2Q9BRP0 275 aa7.47□□□□□ -1.21
CXCL12-203ENST00000374429 A0A087WVE0 104 aa7.47□□□□□ -1.21
CXCL12-203ENST00000374429 CCL18P55774 89 aa7.47□□□□□ -1.21
CXCL12-203ENST00000374429 S100A7L2Q5SY68 101 aa7.46□□□□□ -1.22
CXCL12-203ENST00000374429 C20orf197Q8N268 126 aa7.46□□□□□ -1.22
CXCL12-203ENST00000374429 C10orf25Q5T742 122 aa7.45□□□□□ -1.22
CXCL12-203ENST00000374429 KPRPQ5T749 579 aaPredicted RBP7.45□□□□□ -1.22
CXCL12-203ENST00000374429 LINC00337Q8N6G1 96 aa7.45□□□□□ -1.22
CXCL12-203ENST00000374429 IGHV3OR16-9A0A0B4J2B5 98 aa7.45□□□□□ -1.22
CXCL12-203ENST00000374429 NDUFC2O95298 119 aa7.45□□□□□ -1.22
CXCL12-203ENST00000374429 TRBV30A0A0K0K1B3 111 aa7.45□□□□□ -1.22
CXCL12-203ENST00000374429 CXCL5P42830 114 aa7.44□□□□□ -1.22
CXCL12-203ENST00000374429 BAALC-AS2P0C853 105 aa7.44□□□□□ -1.22
CXCL12-203ENST00000374429 SPAG11BQ08648 103 aa7.44□□□□□ -1.22
CXCL12-203ENST00000374429 TGP01266 2768 aa7.44□□□□□ -1.22
CXCL12-203ENST00000374429 USP17L23D6RBM5 183 aa7.43□□□□□ -1.22
CXCL12-203ENST00000374429 RBM3P98179 157 aaKnown RBP7.43□□□□□ -1.22
CXCL12-203ENST00000374429 FAM218AQ96MZ4 157 aa7.43□□□□□ -1.22
CXCL12-203ENST00000374429 DEFB131BA0A096LNP1 70 aa7.43□□□□□ -1.22
CXCL12-203ENST00000374429 Q8NAQ8 132 aa7.43□□□□□ -1.22
CXCL12-203ENST00000374429 SMIM11BQ8TCY0 68 aa7.43□□□□□ -1.22
CXCL12-203ENST00000374429 ZNF561-AS1K7EIQ3 104 aa7.42□□□□□ -1.22
CXCL12-203ENST00000374429 IGLV5-39A0A0G2JS06 123 aa7.41□□□□□ -1.22
CXCL12-203ENST00000374429 LYRM9A8MSI8 78 aa7.41□□□□□ -1.22
CXCL12-203ENST00000374429 C11orf45Q8TAV5 145 aa7.41□□□□□ -1.22
CXCL12-203ENST00000374429 A0A087WYN8 130 aa7.41□□□□□ -1.22
CXCL12-203ENST00000374429 MPLKIPQ8TAP9 179 aa7.41□□□□□ -1.22
CXCL12-203ENST00000374429 LST1O00453 97 aa7.41□□□□□ -1.22
CXCL12-203ENST00000374429 A0A087WZ39 114 aa7.4□□□□□ -1.22
CXCL12-203ENST00000374429 GHRHP01286 108 aa7.4□□□□□ -1.22
CXCL12-203ENST00000374429 MIFP14174 115 aa7.4□□□□□ -1.22
CXCL12-203ENST00000374429 C14orf132Q9NPU4 83 aa7.4□□□□□ -1.22
CXCL12-203ENST00000374429 SERP1Q9Y6X1 66 aa7.4□□□□□ -1.23
CXCL12-203ENST00000374429 SMIM26A0A096LP01 95 aa7.39□□□□□ -1.23
CXCL12-203ENST00000374429 CAMK2N2Q96S95 79 aa7.39□□□□□ -1.23
CXCL12-203ENST00000374429 TRAV23DV6A0A075B6W5 121 aa7.39□□□□□ -1.23
CXCL12-203ENST00000374429 IGKV2-28A0A075B6P5 120 aa7.38□□□□□ -1.23
CXCL12-203ENST00000374429 IGKV2D-28P01615 120 aa7.38□□□□□ -1.23
CXCL12-203ENST00000374429 INAFM2P0DMQ5 153 aa7.38□□□□□ -1.23
CXCL12-203ENST00000374429 LYPD5Q6UWN5 251 aa7.38□□□□□ -1.23
CXCL12-203ENST00000374429 IGLV5-45A0A087WSX0 123 aa7.38□□□□□ -1.23
CXCL12-203ENST00000374429 PMAIP1Q13794 54 aa7.38□□□□□ -1.23
CXCL12-203ENST00000374429 TIMM17BO60830 172 aa7.37□□□□□ -1.23
CXCL12-203ENST00000374429 C6orf99Q4VX62 202 aa7.37□□□□□ -1.23
CXCL12-203ENST00000374429 ESRGQ1W209 222 aa7.37□□□□□ -1.23
CXCL12-203ENST00000374429 DEFB105AQ8NG35 78 aa7.37□□□□□ -1.23
CXCL12-203ENST00000374429 TRAV13-2A0A0B4J235 113 aa7.36□□□□□ -1.23
CXCL12-203ENST00000374429 CD164L2Q6UWJ8 174 aa7.36□□□□□ -1.23
CXCL12-203ENST00000374429 LINC00474Q9P2X8 69 aa7.36□□□□□ -1.23
CXCL12-203ENST00000374429 UPK3BQ9BT76 320 aa7.36□□□□□ -1.23
CXCL12-203ENST00000374429 C9orf129Q5T035 196 aaKnown RBP7.36□□□□□ -1.23
CXCL12-203ENST00000374429 ANK2Q01484 3957 aa7.36□□□□□ -1.23
CXCL12-203ENST00000374429 COPS9Q8WXC6 57 aa7.35□□□□□ -1.23
CXCL12-203ENST00000374429 LAMTOR3Q9UHA4 124 aa7.35□□□□□ -1.23
CXCL12-203ENST00000374429 NDUFC2-KCTD14E9PQ53 114 aa7.35□□□□□ -1.23
CXCL12-203ENST00000374429 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.34□□□□□ -1.24
CXCL12-203ENST00000374429 ENHOQ6UWT2 76 aa7.34□□□□□ -1.24
CXCL12-203ENST00000374429 WFDC9Q8NEX5 89 aa7.34□□□□□ -1.24
CXCL12-203ENST00000374429 IBA57-AS1B1ANH7 110 aa7.33□□□□□ -1.24
CXCL12-203ENST00000374429 SNURFQ9Y675 71 aa7.33□□□□□ -1.24
CXCL12-203ENST00000374429 LELP1Q5T871 98 aa7.33□□□□□ -1.24
CXCL12-203ENST00000374429 COL7A1Q02388 2944 aa7.33□□□□□ -1.24
CXCL12-203ENST00000374429 IGKV2-24A0A0C4DH68 120 aa7.32□□□□□ -1.24
CXCL12-203ENST00000374429 RPL37AP8A6NKH3 93 aa7.32□□□□□ -1.24
CXCL12-203ENST00000374429 SRRM2Q9UQ35 2752 aaKnown RBP7.32□□□□□ -1.24
CXCL12-203ENST00000374429 FUSP35637 526 aaKnown RBP eCLIP7.32□□□□□ -1.24
CXCL12-203ENST00000374429 Q8NDZ9 215 aa7.32□□□□□ -1.24
CXCL12-203ENST00000374429 M0R2N4 97 aa7.31□□□□□ -1.24
CXCL12-203ENST00000374429 FP248Q71RG6 208 aaPredicted RBP7.31□□□□□ -1.24
CXCL12-203ENST00000374429 LINC01600Q96MT4 127 aa7.31□□□□□ -1.24
CXCL12-203ENST00000374429 A0A1B0GUV1 79 aa7.3□□□□□ -1.24
CXCL12-203ENST00000374429 UBE2DNLQ8IWF7 75 aa7.3□□□□□ -1.24
CXCL12-203ENST00000374429 CASC10Q5T4H9 136 aa7.3□□□□□ -1.24
CXCL12-203ENST00000374429 MRPL55Q7Z7F7 128 aaKnown RBP7.3□□□□□ -1.24
CXCL12-203ENST00000374429 Q8IZM0 81 aa7.29□□□□□ -1.24
CXCL12-203ENST00000374429 PSCAO43653 123 aa7.29□□□□□ -1.24
CXCL12-203ENST00000374429 Q6ZRU5 148 aa7.29□□□□□ -1.24
CXCL12-203ENST00000374429 TRBV7-6A0A0J9YX20 115 aa7.28□□□□□ -1.24
CXCL12-203ENST00000374429 F8WEM9 126 aa7.28□□□□□ -1.24
CXCL12-203ENST00000374429 LINC00846Q9NV44 126 aa7.28□□□□□ -1.24
CXCL12-203ENST00000374429 TRBV10-3A0A0K0K1G6 114 aa7.28□□□□□ -1.24
CXCL12-203ENST00000374429 Q6JHZ5 121 aa7.28□□□□□ -1.24
CXCL12-203ENST00000374429 MDFIQ99750 246 aa7.27□□□□□ -1.25
CXCL12-203ENST00000374429 KIAA0087Q14695 138 aa7.27□□□□□ -1.25
CXCL12-203ENST00000374429 C4orf48Q5BLP8 95 aa7.27□□□□□ -1.25
CXCL12-203ENST00000374429 C6orf48Q9UBA6 75 aa7.27□□□□□ -1.25
CXCL12-203ENST00000374429 FAM19A1Q7Z5A9 133 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms