RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 NDUFC2-KCTD14E9PQ53 114 aa9.8□□□□□ -0.84
HMGA1-203ENST00000374116 NPC2P61916 151 aa9.8□□□□□ -0.84
HMGA1-203ENST00000374116 OBSCN-AS1Q96MR7 158 aa9.79□□□□□ -0.84
HMGA1-203ENST00000374116 TRAV10A0A0B4J240 114 aa9.78□□□□□ -0.84
HMGA1-203ENST00000374116 MALP21145 153 aa9.78□□□□□ -0.84
HMGA1-203ENST00000374116 CYSTM1Q9H1C7 97 aa9.78□□□□□ -0.84
HMGA1-203ENST00000374116 Q5XG85 94 aa9.77□□□□□ -0.84
HMGA1-203ENST00000374116 COX7B2Q8TF08 81 aa9.77□□□□□ -0.84
HMGA1-203ENST00000374116 IGHV3OR16-9A0A0B4J2B5 98 aa9.77□□□□□ -0.85
HMGA1-203ENST00000374116 A0A1B0GUV1 79 aa9.77□□□□□ -0.85
HMGA1-203ENST00000374116 PAX4O43316 350 aa9.77□□□□□ -0.85
HMGA1-203ENST00000374116 RPL28P46779 137 aaKnown RBP9.77□□□□□ -0.85
HMGA1-203ENST00000374116 IGKV3OR2-268A0A0C4DH90 116 aa9.76□□□□□ -0.85
HMGA1-203ENST00000374116 OXTP01178 125 aa9.76□□□□□ -0.85
HMGA1-203ENST00000374116 A0A087WZ39 114 aa9.75□□□□□ -0.85
HMGA1-203ENST00000374116 NUPR2A6NF83 97 aa9.75□□□□□ -0.85
HMGA1-203ENST00000374116 C3orf84H3BNL1 204 aa9.75□□□□□ -0.85
HMGA1-203ENST00000374116 SOSTDC1Q6X4U4 206 aa9.75□□□□□ -0.85
HMGA1-203ENST00000374116 FAM218AQ96MZ4 157 aa9.75□□□□□ -0.85
HMGA1-203ENST00000374116 LINC00959A0A1B0GUT2 108 aa9.75□□□□□ -0.85
HMGA1-203ENST00000374116 DNAL4O96015 105 aa9.75□□□□□ -0.85
HMGA1-203ENST00000374116 A0A0U1RRA0 63 aa9.74□□□□□ -0.85
HMGA1-203ENST00000374116 NDUFC2O95298 119 aa9.73□□□□□ -0.85
HMGA1-203ENST00000374116 TRAV13-2A0A0B4J235 113 aa9.72□□□□□ -0.85
HMGA1-203ENST00000374116 USP17L23D6RBM5 183 aa9.72□□□□□ -0.85
HMGA1-203ENST00000374116 SS18Q15532 418 aa9.72□□□□□ -0.85
HMGA1-203ENST00000374116 PLECQ15149 4684 aaKnown RBP9.72□□□□□ -0.85
HMGA1-203ENST00000374116 EPM2AB3EWF7 344 aa9.72□□□□□ -0.85
HMGA1-203ENST00000374116 TOMM7Q9P0U1 55 aa9.72□□□□□ -0.85
HMGA1-203ENST00000374116 ATP5EP2Q5VTU8 51 aa9.71□□□□□ -0.85
HMGA1-203ENST00000374116 LINC01561Q8N1V8 128 aa9.71□□□□□ -0.85
HMGA1-203ENST00000374116 A0A096LPF7 62 aa9.7□□□□□ -0.86
HMGA1-203ENST00000374116 DSCR8Q96T75 97 aa9.7□□□□□ -0.86
HMGA1-203ENST00000374116 APLNQ9ULZ1 77 aa9.7□□□□□ -0.86
HMGA1-203ENST00000374116 DYNC2H1Q8NCM8 4307 aaKnown RBP9.69□□□□□ -0.86
HMGA1-203ENST00000374116 IBA57-AS1B1ANH7 110 aa9.69□□□□□ -0.86
HMGA1-203ENST00000374116 H0YGX0 51 aa9.68□□□□□ -0.86
HMGA1-203ENST00000374116 S100A7L2Q5SY68 101 aa9.68□□□□□ -0.86
HMGA1-203ENST00000374116 LINC00846Q9NV44 126 aa9.68□□□□□ -0.86
HMGA1-203ENST00000374116 C4orf26Q17RF5 130 aa9.68□□□□□ -0.86
HMGA1-203ENST00000374116 CRPP02741 224 aa9.67□□□□□ -0.86
HMGA1-203ENST00000374116 XCL1P47992 114 aa9.67□□□□□ -0.86
HMGA1-203ENST00000374116 LINC00158P58513 81 aa9.67□□□□□ -0.86
HMGA1-203ENST00000374116 MIR7-3HGQ8N6C7 128 aa9.67□□□□□ -0.86
HMGA1-203ENST00000374116 IGKV3D-7A0A0C4DH55 119 aa9.66□□□□□ -0.86
HMGA1-203ENST00000374116 BCE1O60756 84 aa9.66□□□□□ -0.86
HMGA1-203ENST00000374116 C6orf226Q5I0X4 101 aa9.66□□□□□ -0.86
HMGA1-203ENST00000374116 HRCT1Q6UXD1 115 aa9.66□□□□□ -0.86
HMGA1-203ENST00000374116 Q8IZM0 81 aa9.66□□□□□ -0.86
HMGA1-203ENST00000374116 Q9HAA7 133 aa9.66□□□□□ -0.86
HMGA1-203ENST00000374116 TRBV10-3A0A0K0K1G6 114 aa9.65□□□□□ -0.86
HMGA1-203ENST00000374116 C14orf132Q9NPU4 83 aa9.65□□□□□ -0.86
HMGA1-203ENST00000374116 LY6G6CO95867 125 aa9.64□□□□□ -0.87
HMGA1-203ENST00000374116 CD164L2Q6UWJ8 174 aa9.64□□□□□ -0.87
HMGA1-203ENST00000374116 LYPD5Q6UWN5 251 aa9.64□□□□□ -0.87
HMGA1-203ENST00000374116 LINC00269Q8N2A0 174 aa9.64□□□□□ -0.87
HMGA1-203ENST00000374116 SND1-IT1Q9HBX3 110 aa9.64□□□□□ -0.87
HMGA1-203ENST00000374116 CLPSL2Q6UWE3 100 aa9.63□□□□□ -0.87
HMGA1-203ENST00000374116 A0A087WVE0 104 aa9.63□□□□□ -0.87
HMGA1-203ENST00000374116 ANGP03950 147 aaKnown RBP9.63□□□□□ -0.87
HMGA1-203ENST00000374116 LELP1Q5T871 98 aa9.63□□□□□ -0.87
HMGA1-203ENST00000374116 KMT2CQ8NEZ4 4911 aaKnown RBP9.63□□□□□ -0.87
HMGA1-203ENST00000374116 REG3AQ06141 175 aa9.62□□□□□ -0.87
HMGA1-203ENST00000374116 C9orf129Q5T035 196 aaKnown RBP9.62□□□□□ -0.87
HMGA1-203ENST00000374116 LINC00337Q8N6G1 96 aa9.62□□□□□ -0.87
HMGA1-203ENST00000374116 SERP1Q9Y6X1 66 aa9.62□□□□□ -0.87
HMGA1-203ENST00000374116 IGKV2-28A0A075B6P5 120 aa9.61□□□□□ -0.87
HMGA1-203ENST00000374116 A0A087WYN8 130 aa9.61□□□□□ -0.87
HMGA1-203ENST00000374116 IGKV2D-28P01615 120 aa9.61□□□□□ -0.87
HMGA1-203ENST00000374116 CCKP06307 115 aa9.61□□□□□ -0.87
HMGA1-203ENST00000374116 CCL18P55774 89 aa9.61□□□□□ -0.87
HMGA1-203ENST00000374116 ESRGQ1W209 222 aa9.61□□□□□ -0.87
HMGA1-203ENST00000374116 CHCHD10Q8WYQ3 142 aaPredicted RBP9.61□□□□□ -0.87
HMGA1-203ENST00000374116 PRO0628Q9UI54 55 aa9.61□□□□□ -0.87
HMGA1-203ENST00000374116 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
HMGA1-203ENST00000374116 FAM236DA0A1B0GTK5 79 aa9.61□□□□□ -0.87
HMGA1-203ENST00000374116 FAM236CP0DP71 79 aa9.61□□□□□ -0.87
HMGA1-203ENST00000374116 PFN2P35080 140 aa9.61□□□□□ -0.87
HMGA1-203ENST00000374116 LINC00167Q96N53 147 aa9.61□□□□□ -0.87
HMGA1-203ENST00000374116 H3BNG1 76 aa9.6□□□□□ -0.87
HMGA1-203ENST00000374116 SMIM11BQ8TCY0 68 aa9.6□□□□□ -0.87
HMGA1-203ENST00000374116 LINC00476Q8WZB0 136 aa9.6□□□□□ -0.87
HMGA1-203ENST00000374116 LINC00588Q9Y4M8 146 aa9.6□□□□□ -0.87
HMGA1-203ENST00000374116 GHRHP01286 108 aa9.59□□□□□ -0.87
HMGA1-203ENST00000374116 UBE2DNLQ8IWF7 75 aa9.59□□□□□ -0.87
HMGA1-203ENST00000374116 HYDINQ4G0P3 5121 aa9.58□□□□□ -0.88
HMGA1-203ENST00000374116 KIAA0087Q14695 138 aa9.58□□□□□ -0.88
HMGA1-203ENST00000374116 Q8N3U1 123 aa9.58□□□□□ -0.88
HMGA1-203ENST00000374116 JMJD7-PLA2G4BH0Y9G9 81 aa9.57□□□□□ -0.88
HMGA1-203ENST00000374116 COX17Q14061 63 aa9.57□□□□□ -0.88
HMGA1-203ENST00000374116 IGLV10-54A0A075B6I4 117 aa9.56□□□□□ -0.88
HMGA1-203ENST00000374116 ORMDL1Q9P0S3 153 aa9.56□□□□□ -0.88
HMGA1-203ENST00000374116 LCE6AA0A183 80 aa9.55□□□□□ -0.88
HMGA1-203ENST00000374116 PRR34Q9NV39 138 aa9.55□□□□□ -0.88
HMGA1-203ENST00000374116 LECT2O14960 151 aa9.54□□□□□ -0.88
HMGA1-203ENST00000374116 H7BZZ5 65 aa9.54□□□□□ -0.88
HMGA1-203ENST00000374116 NCR3O14931 201 aa9.54□□□□□ -0.88
HMGA1-203ENST00000374116 TRAV7A0A075B6U4 112 aa9.53□□□□□ -0.88
HMGA1-203ENST00000374116 M0R2N4 97 aa9.53□□□□□ -0.88
HMGA1-203ENST00000374116 KLKP1Q107X0 134 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms