RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 COL7A1Q02388 2944 aa12.99□□□□□ -0.33
HDAC1-201ENST00000373548 DNAH9Q9NYC9 4486 aa12.99□□□□□ -0.33
HDAC1-201ENST00000373548 C2orf48Q96LS8 159 aa12.98□□□□□ -0.33
HDAC1-201ENST00000373548 STAB2Q8WWQ8 2551 aa12.97□□□□□ -0.33
HDAC1-201ENST00000373548 NCR3O14931 201 aa12.97□□□□□ -0.33
HDAC1-201ENST00000373548 Q6ZRU5 148 aa12.97□□□□□ -0.33
HDAC1-201ENST00000373548 H0YGX0 51 aa12.97□□□□□ -0.33
HDAC1-201ENST00000373548 UPK3BQ9BT76 320 aa12.97□□□□□ -0.33
HDAC1-201ENST00000373548 TEX49A0A1B0GTD5 131 aa12.96□□□□□ -0.33
HDAC1-201ENST00000373548 TMEM126AQ9H061 195 aa12.95□□□□□ -0.34
HDAC1-201ENST00000373548 A0A087WYN8 130 aa12.95□□□□□ -0.34
HDAC1-201ENST00000373548 XAGE1AQ9HD64 81 aa12.94□□□□□ -0.34
HDAC1-201ENST00000373548 F8WDY8 70 aa12.91□□□□□ -0.34
HDAC1-201ENST00000373548 BAALC-AS2P0C853 105 aa12.91□□□□□ -0.34
HDAC1-201ENST00000373548 S100A7L2Q5SY68 101 aa12.9□□□□□ -0.34
HDAC1-201ENST00000373548 CASC10Q5T4H9 136 aa12.9□□□□□ -0.34
HDAC1-201ENST00000373548 RPL18AQ02543 176 aaKnown RBP12.89□□□□□ -0.35
HDAC1-201ENST00000373548 NDUFC2-KCTD14E9PQ53 114 aa12.89□□□□□ -0.35
HDAC1-201ENST00000373548 SYCNQ0VAF6 134 aa12.89□□□□□ -0.35
HDAC1-201ENST00000373548 C22orf24Q9Y442 160 aa12.89□□□□□ -0.35
HDAC1-201ENST00000373548 LECT2O14960 151 aa12.88□□□□□ -0.35
HDAC1-201ENST00000373548 CDIP1Q9H305 208 aa12.88□□□□□ -0.35
HDAC1-201ENST00000373548 DNAL4O96015 105 aa12.87□□□□□ -0.35
HDAC1-201ENST00000373548 IGLV6-57P01721 117 aa12.87□□□□□ -0.35
HDAC1-201ENST00000373548 RMI2Q96E14 147 aa12.87□□□□□ -0.35
HDAC1-201ENST00000373548 APLNQ9ULZ1 77 aa12.87□□□□□ -0.35
HDAC1-201ENST00000373548 KRTAP21-3Q3LHN1 58 aa12.86□□□□□ -0.35
HDAC1-201ENST00000373548 USP17L23D6RBM5 183 aa12.86□□□□□ -0.35
HDAC1-201ENST00000373548 DNAH1Q9P2D7 4330 aa12.86□□□□□ -0.35
HDAC1-201ENST00000373548 C6orf99Q4VX62 202 aa12.85□□□□□ -0.35
HDAC1-201ENST00000373548 Q6ZRP5 223 aa12.85□□□□□ -0.35
HDAC1-201ENST00000373548 VPREB1P12018 145 aa12.84□□□□□ -0.35
HDAC1-201ENST00000373548 GAGE2EQ4V326 116 aa12.84□□□□□ -0.35
HDAC1-201ENST00000373548 GAGE2DQ9UEU5 116 aa12.84□□□□□ -0.35
HDAC1-201ENST00000373548 SLPIP03973 132 aa12.83□□□□□ -0.36
HDAC1-201ENST00000373548 TRBV10-3A0A0K0K1G6 114 aa12.82□□□□□ -0.36
HDAC1-201ENST00000373548 SIGMAR1Q99720 223 aa12.82□□□□□ -0.36
HDAC1-201ENST00000373548 KRTAP1-5Q9BYS1 174 aa12.82□□□□□ -0.36
HDAC1-201ENST00000373548 NHLRC4P0CG21 123 aaPredicted RBP12.82□□□□□ -0.36
HDAC1-201ENST00000373548 A0A1B0GX51 115 aa12.8□□□□□ -0.36
HDAC1-201ENST00000373548 UBE2DNLQ8IWF7 75 aa12.8□□□□□ -0.36
HDAC1-201ENST00000373548 Q8N814 137 aa12.8□□□□□ -0.36
HDAC1-201ENST00000373548 LINC00167Q96N53 147 aa12.8□□□□□ -0.36
HDAC1-201ENST00000373548 C9orf129Q5T035 196 aaKnown RBP12.79□□□□□ -0.36
HDAC1-201ENST00000373548 DYNC2H1Q8NCM8 4307 aaKnown RBP12.78□□□□□ -0.36
HDAC1-201ENST00000373548 MEGF8Q7Z7M0 2845 aa12.78□□□□□ -0.36
HDAC1-201ENST00000373548 PCP4P48539 62 aa12.77□□□□□ -0.36
HDAC1-201ENST00000373548 TRAV23DV6A0A075B6W5 121 aa12.77□□□□□ -0.37
HDAC1-201ENST00000373548 M0R378 163 aa12.77□□□□□ -0.37
HDAC1-201ENST00000373548 TLX1NBP0CAT3 122 aa12.77□□□□□ -0.37
HDAC1-201ENST00000373548 LINC00575Q6W349 94 aa12.76□□□□□ -0.37
HDAC1-201ENST00000373548 ORMDL1Q9P0S3 153 aa12.76□□□□□ -0.37
HDAC1-201ENST00000373548 XGP55808 180 aa12.76□□□□□ -0.37
HDAC1-201ENST00000373548 NUPR2A6NF83 97 aa12.74□□□□□ -0.37
HDAC1-201ENST00000373548 DIRC1Q969H9 104 aa12.73□□□□□ -0.37
HDAC1-201ENST00000373548 FAM240AA0A1B0GVK7 77 aa12.73□□□□□ -0.37
HDAC1-201ENST00000373548 ZNF73O43830 326 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-201ENST00000373548 MT-ATP8P03928 68 aa12.72□□□□□ -0.37
HDAC1-201ENST00000373548 LYSTQ99698 3801 aa12.71□□□□□ -0.37
HDAC1-201ENST00000373548 INAFM2P0DMQ5 153 aa12.71□□□□□ -0.38
HDAC1-201ENST00000373548 SERTAD4-AS1Q5TG53 156 aa12.71□□□□□ -0.38
HDAC1-201ENST00000373548 OBSCN-AS1Q96MR7 158 aa12.71□□□□□ -0.38
HDAC1-201ENST00000373548 PRKDCP78527 4128 aaKnown RBP12.71□□□□□ -0.38
HDAC1-201ENST00000373548 CSMD3Q7Z407 3707 aa12.7□□□□□ -0.38
HDAC1-201ENST00000373548 SNCGO76070 127 aa12.7□□□□□ -0.38
HDAC1-201ENST00000373548 hADV29S1A0JD25 119 aa12.7□□□□□ -0.38
HDAC1-201ENST00000373548 PLA2G2DQ9UNK4 145 aa12.67□□□□□ -0.38
HDAC1-201ENST00000373548 COX7BP24311 80 aa12.67□□□□□ -0.38
HDAC1-201ENST00000373548 NKAPP1Q8N9T2 125 aa12.67□□□□□ -0.38
HDAC1-201ENST00000373548 TRBV7-6A0A0J9YX20 115 aa12.66□□□□□ -0.38
HDAC1-201ENST00000373548 TMEM256-PLSCR3K7ERE1 68 aa12.66□□□□□ -0.38
HDAC1-201ENST00000373548 PSCAO43653 123 aa12.66□□□□□ -0.38
HDAC1-201ENST00000373548 ELOF1P60002 83 aaKnown RBP12.66□□□□□ -0.38
HDAC1-201ENST00000373548 C14orf132Q9NPU4 83 aa12.66□□□□□ -0.38
HDAC1-201ENST00000373548 GAGE2BQ13066 116 aa12.65□□□□□ -0.38
HDAC1-201ENST00000373548 C21orf62-AS1Q17RA5 79 aa12.65□□□□□ -0.38
HDAC1-201ENST00000373548 C7orf33Q8WU49 177 aa12.65□□□□□ -0.38
HDAC1-201ENST00000373548 TENM2Q9NT68 2774 aa12.65□□□□□ -0.39
HDAC1-201ENST00000373548 FAM168BA1KXE4 195 aa12.64□□□□□ -0.39
HDAC1-201ENST00000373548 ACYP1P07311 99 aa12.64□□□□□ -0.39
HDAC1-201ENST00000373548 PLECQ15149 4684 aaKnown RBP12.64□□□□□ -0.39
HDAC1-201ENST00000373548 LOC107984640A0A0U1RRK4 108 aa12.64□□□□□ -0.39
HDAC1-201ENST00000373548 DNAH10Q8IVF4 4471 aa12.62□□□□□ -0.39
HDAC1-201ENST00000373548 IGLV5-37A0A075B6J1 123 aa12.62□□□□□ -0.39
HDAC1-201ENST00000373548 A0A1B0GV72 72 aa12.62□□□□□ -0.39
HDAC1-201ENST00000373548 SCGB1A1P11684 91 aa12.62□□□□□ -0.39
HDAC1-201ENST00000373548 KRTAP7-1Q8IUC3 87 aa12.62□□□□□ -0.39
HDAC1-201ENST00000373548 NBDYA0A0U1RRE5 68 aa12.62□□□□□ -0.39
HDAC1-201ENST00000373548 GAGE2AQ6NT46 116 aa12.62□□□□□ -0.39
HDAC1-201ENST00000373548 Q6ZQY7 126 aa12.62□□□□□ -0.39
HDAC1-201ENST00000373548 KCNQ1DNQ9H478 68 aa12.61□□□□□ -0.39
HDAC1-201ENST00000373548 CNBPP62633 177 aaKnown RBP12.61□□□□□ -0.39
HDAC1-201ENST00000373548 TTC32Q5I0X7 151 aa12.61□□□□□ -0.39
HDAC1-201ENST00000373548 DNAH7Q8WXX0 4024 aa12.6□□□□□ -0.39
HDAC1-201ENST00000373548 LINC00528Q8N1L1 170 aa12.6□□□□□ -0.39
HDAC1-201ENST00000373548 JMJD7-PLA2G4BH0Y9G9 81 aa12.58□□□□□ -0.4
HDAC1-201ENST00000373548 TGP01266 2768 aa12.57□□□□□ -0.4
HDAC1-201ENST00000373548 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-201ENST00000373548 SMCR5Q8TEV8 140 aa12.56□□□□□ -0.4
HDAC1-201ENST00000373548 FBN3Q75N90 2809 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms