RNA–Protein interactions for RNA: ENST00000373063.7

FOXP4-204, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 5,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-204ENST00000373063 TRBV7-7A0A0K0K1E9 115 aa15.39■□□□□ 0.05
FOXP4-204ENST00000373063 ZFYVE26Q68DK2 2539 aa15.38■□□□□ 0.05
FOXP4-204ENST00000373063 RPL37AP61513 92 aaKnown RBP15.38■□□□□ 0.05
FOXP4-204ENST00000373063 EPM2AB3EWF7 344 aa15.36■□□□□ 0.05
FOXP4-204ENST00000373063 Q8NBF4 154 aa15.36■□□□□ 0.05
FOXP4-204ENST00000373063 hDV103S1A0JD37 113 aa15.35■□□□□ 0.05
FOXP4-204ENST00000373063 SRCAPQ6ZRS2 3230 aa15.33■□□□□ 0.04
FOXP4-204ENST00000373063 K7EIL1 84 aa15.33■□□□□ 0.04
FOXP4-204ENST00000373063 KRTAP10-11P60412 298 aa15.33■□□□□ 0.04
FOXP4-204ENST00000373063 LINC01546A6NGU7 62 aa15.32■□□□□ 0.04
FOXP4-204ENST00000373063 Q9UF83 564 aa15.32■□□□□ 0.04
FOXP4-204ENST00000373063 C1orf64Q8NEQ6 169 aa15.32■□□□□ 0.04
FOXP4-204ENST00000373063 LINC00846Q9NV44 126 aa15.31■□□□□ 0.04
FOXP4-204ENST00000373063 SPATA3Q8NHX4 192 aa15.3■□□□□ 0.04
FOXP4-204ENST00000373063 SOSTDC1Q6X4U4 206 aa15.3■□□□□ 0.04
FOXP4-204ENST00000373063 GVQW2A0A096LPI5 108 aaPredicted RBP15.29■□□□□ 0.04
FOXP4-204ENST00000373063 ELOF1P60002 83 aaKnown RBP15.29■□□□□ 0.04
FOXP4-204ENST00000373063 Q6ZRX8 168 aa15.28■□□□□ 0.04
FOXP4-204ENST00000373063 FN1P02751 2386 aaKnown RBP15.28■□□□□ 0.04
FOXP4-204ENST00000373063 ZNF462Q96JM2 2506 aa15.28■□□□□ 0.04
FOXP4-204ENST00000373063 DNAH10OSP0CZ25 163 aa15.27■□□□□ 0.04
FOXP4-204ENST00000373063 BCE1O60756 84 aa15.27■□□□□ 0.03
FOXP4-204ENST00000373063 SMIM29Q86T20 159 aa15.26■□□□□ 0.03
FOXP4-204ENST00000373063 SMIM26A0A096LP01 95 aa15.26■□□□□ 0.03
FOXP4-204ENST00000373063 CXCL6P80162 114 aa15.26■□□□□ 0.03
FOXP4-204ENST00000373063 ANKRD11Q6UB99 2663 aaPredicted RBP15.25■□□□□ 0.03
FOXP4-204ENST00000373063 IGLV5-45A0A087WSX0 123 aa15.25■□□□□ 0.03
FOXP4-204ENST00000373063 LINC00313P59037 77 aa15.25■□□□□ 0.03
FOXP4-204ENST00000373063 LINC00476Q8WZB0 136 aa15.24■□□□□ 0.03
FOXP4-204ENST00000373063 TMEM254Q8TBM7 123 aa15.22■□□□□ 0.03
FOXP4-204ENST00000373063 ST20-AS1Q8NBB2 130 aa15.22■□□□□ 0.03
FOXP4-204ENST00000373063 TP53AIP1Q9HCN2 124 aa15.2■□□□□ 0.02
FOXP4-204ENST00000373063 ATP11AUNQ6ZP68 121 aa15.2■□□□□ 0.02
FOXP4-204ENST00000373063 Q96NJ1 140 aa15.19■□□□□ 0.02
FOXP4-204ENST00000373063 PCSK5Q92824 1860 aa15.18■□□□□ 0.02
FOXP4-204ENST00000373063 TLN2Q9Y4G6 2542 aa15.18■□□□□ 0.02
FOXP4-204ENST00000373063 FAM168BA1KXE4 195 aa15.17■□□□□ 0.02
FOXP4-204ENST00000373063 USP9XQ93008 2570 aaPredicted RBP15.15■□□□□ 0.02
FOXP4-204ENST00000373063 KRTAP10-3P60369 221 aa15.15■□□□□ 0.02
FOXP4-204ENST00000373063 CEP295Q9C0D2 2601 aa15.15■□□□□ 0.02
FOXP4-204ENST00000373063 WDR87Q6ZQQ6 2873 aa15.14■□□□□ 0.01
FOXP4-204ENST00000373063 PSPHP1O15172 72 aa15.14■□□□□ 0.01
FOXP4-204ENST00000373063 C19orf73Q9NVV2 129 aa15.14■□□□□ 0.01
FOXP4-204ENST00000373063 CHD8Q9HCK8 2581 aa15.12■□□□□ 0.01
FOXP4-204ENST00000373063 CSNK1G2-AS1Q8NCQ2 148 aa15.11■□□□□ 0.01
FOXP4-204ENST00000373063 FAM218AQ96MZ4 157 aa15.1■□□□□ 0.01
FOXP4-204ENST00000373063 COX6B2Q6YFQ2 88 aa15.1■□□□□ 0.01
FOXP4-204ENST00000373063 KLK9Q2XQG4 91 aa15.09■□□□□ 0.01
FOXP4-204ENST00000373063 A0A096LNT2 108 aa15.09■□□□□ 0.01
FOXP4-204ENST00000373063 ACYP2P14621 99 aa15.09■□□□□ 0.01
FOXP4-204ENST00000373063 A0A1B0GW54 56 aa15.07■□□□□ 0
FOXP4-204ENST00000373063 SMR3BP02814 79 aaPredicted RBP15.05■□□□□ -0
FOXP4-204ENST00000373063 A0A1B0GU69 56 aa15.04■□□□□ -0
FOXP4-204ENST00000373063 SERTAD4-AS1Q5TG53 156 aa15.04■□□□□ -0
FOXP4-204ENST00000373063 SPTBN4Q9H254 2564 aa15.04■□□□□ -0
FOXP4-204ENST00000373063 VPREB1P12018 145 aa15.02■□□□□ -0
FOXP4-204ENST00000373063 PMAIP1Q13794 54 aa15.02□□□□□ -0.01
FOXP4-204ENST00000373063 Q6ZQT0 140 aa15.02□□□□□ -0.01
FOXP4-204ENST00000373063 MUC4Q99102 2169 aa15.02□□□□□ -0.01
FOXP4-204ENST00000373063 A0A087WTM6 91 aa15□□□□□ -0.01
FOXP4-204ENST00000373063 LINC00304Q8N9R0 145 aa14.99□□□□□ -0.01
FOXP4-204ENST00000373063 IGLV1-50A0A075B6I6 118 aa14.98□□□□□ -0.01
FOXP4-204ENST00000373063 TM2D3Q9BRN9 247 aa14.98□□□□□ -0.01
FOXP4-204ENST00000373063 C1orf195Q5TG92 126 aa14.97□□□□□ -0.01
FOXP4-204ENST00000373063 ANKRD17O75179 2603 aaKnown RBP14.97□□□□□ -0.01
FOXP4-204ENST00000373063 LOC110117498A0A087WWA1 95 aa14.97□□□□□ -0.01
FOXP4-204ENST00000373063 LINC00336Q6ZUF6 198 aa14.97□□□□□ -0.01
FOXP4-204ENST00000373063 CDIP1Q9H305 208 aa14.96□□□□□ -0.01
FOXP4-204ENST00000373063 C8orf87E5RJ46 101 aa14.96□□□□□ -0.02
FOXP4-204ENST00000373063 IGLV6-57P01721 117 aa14.93□□□□□ -0.02
FOXP4-204ENST00000373063 TRAV22A0A0B4J277 110 aa14.91□□□□□ -0.02
FOXP4-204ENST00000373063 USP9YO00507 2555 aaPredicted RBP14.91□□□□□ -0.02
FOXP4-204ENST00000373063 C15orf56Q8N910 161 aa14.9□□□□□ -0.02
FOXP4-204ENST00000373063 TRBV7-4A0A0J9YYF1 115 aa14.9□□□□□ -0.02
FOXP4-204ENST00000373063 SETD2Q9BYW2 2564 aaPredicted RBP14.89□□□□□ -0.03
FOXP4-204ENST00000373063 C9orf92A6NGG3 77 aa14.89□□□□□ -0.03
FOXP4-204ENST00000373063 ZNF861PO60384 105 aa14.89□□□□□ -0.03
FOXP4-204ENST00000373063 FASNP49327 2511 aaKnown RBP14.89□□□□□ -0.03
FOXP4-204ENST00000373063 KRTAP1-3Q8IUG1 177 aa14.88□□□□□ -0.03
FOXP4-204ENST00000373063 SPAG11AQ6PDA7 123 aa14.88□□□□□ -0.03
FOXP4-204ENST00000373063 H3BPC8 53 aa14.87□□□□□ -0.03
FOXP4-204ENST00000373063 A8MWP4 228 aa14.87□□□□□ -0.03
FOXP4-204ENST00000373063 KCNQ1DNQ9H478 68 aa14.86□□□□□ -0.03
FOXP4-204ENST00000373063 APLNQ9ULZ1 77 aa14.86□□□□□ -0.03
FOXP4-204ENST00000373063 GIG44P09565 113 aaPredicted RBP14.85□□□□□ -0.03
FOXP4-204ENST00000373063 DSCR10P59022 87 aa14.84□□□□□ -0.03
FOXP4-204ENST00000373063 PRR34Q9NV39 138 aa14.84□□□□□ -0.03
FOXP4-204ENST00000373063 MRPL34Q9BQ48 92 aaKnown RBP14.84□□□□□ -0.03
FOXP4-204ENST00000373063 MTORP42345 2549 aa14.8□□□□□ -0.04
FOXP4-204ENST00000373063 LOC101927531A0A1B0GV80 90 aa14.8□□□□□ -0.04
FOXP4-204ENST00000373063 SMCPP49901 116 aaPredicted RBP14.8□□□□□ -0.04
FOXP4-204ENST00000373063 IGLV8-61A0A075B6I0 122 aa14.79□□□□□ -0.04
FOXP4-204ENST00000373063 OBSCN-AS1Q96MR7 158 aa14.79□□□□□ -0.04
FOXP4-204ENST00000373063 C9orf163Q8N9P6 203 aa14.79□□□□□ -0.04
FOXP4-204ENST00000373063 POLQO75417 2590 aa14.79□□□□□ -0.04
FOXP4-204ENST00000373063 KRTAP1-1Q07627 177 aa14.79□□□□□ -0.04
FOXP4-204ENST00000373063 LITAFQ99732 161 aa14.79□□□□□ -0.04
FOXP4-204ENST00000373063 C9orf129Q5T035 196 aaKnown RBP14.79□□□□□ -0.04
FOXP4-204ENST00000373063 SSBP3-AS1Q7Z2R9 100 aa14.79□□□□□ -0.04
FOXP4-204ENST00000373063 CENPFP49454 3210 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms