RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 IGLV4-60A0A075B6I1 120 aa12.61□□□□□ -0.39
MMP9-201ENST00000372330 DNAJC9-AS1A6NH13 148 aa12.61□□□□□ -0.39
MMP9-201ENST00000372330 ODF3L2Q3SX64 289 aa12.6□□□□□ -0.39
MMP9-201ENST00000372330 M0R2N4 97 aa12.6□□□□□ -0.39
MMP9-201ENST00000372330 SETD2Q9BYW2 2564 aaPredicted RBP12.6□□□□□ -0.39
MMP9-201ENST00000372330 WNK1Q9H4A3 2382 aa12.59□□□□□ -0.39
MMP9-201ENST00000372330 ITPR2Q14571 2701 aa12.59□□□□□ -0.39
MMP9-201ENST00000372330 BPY2O14599 106 aa12.59□□□□□ -0.39
MMP9-201ENST00000372330 PRR3P79522 188 aaKnown RBP12.59□□□□□ -0.39
MMP9-201ENST00000372330 FAM229BQ4G0N7 80 aa12.59□□□□□ -0.39
MMP9-201ENST00000372330 LINC00959A0A1B0GUT2 108 aa12.59□□□□□ -0.39
MMP9-201ENST00000372330 TRBV6-8A0A0A6YYG3 113 aa12.58□□□□□ -0.4
MMP9-201ENST00000372330 PLAC8L1A1L4L8 177 aa12.58□□□□□ -0.4
MMP9-201ENST00000372330 C1orf158Q8N1D5 194 aa12.58□□□□□ -0.4
MMP9-201ENST00000372330 PRR15Q8IV56 129 aa12.57□□□□□ -0.4
MMP9-201ENST00000372330 STHQ8IWL8 128 aa12.56□□□□□ -0.4
MMP9-201ENST00000372330 ACANP16112 2415 aa12.56□□□□□ -0.4
MMP9-201ENST00000372330 PRYO14603 147 aa12.56□□□□□ -0.4
MMP9-201ENST00000372330 FUSP35637 526 aaKnown RBP eCLIP12.56□□□□□ -0.4
MMP9-201ENST00000372330 MUC7Q8TAX7 377 aa12.56□□□□□ -0.4
MMP9-201ENST00000372330 ESM1Q9NQ30 184 aa12.56□□□□□ -0.4
MMP9-201ENST00000372330 CCL24O00175 119 aa12.55□□□□□ -0.4
MMP9-201ENST00000372330 KRTAP1-1Q07627 177 aa12.54□□□□□ -0.4
MMP9-201ENST00000372330 SPATA3Q8NHX4 192 aa12.54□□□□□ -0.4
MMP9-201ENST00000372330 PMAIP1Q13794 54 aa12.54□□□□□ -0.4
MMP9-201ENST00000372330 Q6ZTC4 211 aa12.53□□□□□ -0.4
MMP9-201ENST00000372330 SETXQ7Z333 2677 aaKnown RBP12.51□□□□□ -0.41
MMP9-201ENST00000372330 Q6ZRU5 148 aa12.51□□□□□ -0.41
MMP9-201ENST00000372330 MTORP42345 2549 aa12.51□□□□□ -0.41
MMP9-201ENST00000372330 NOP10Q9NPE3 64 aaKnown RBP12.5□□□□□ -0.41
MMP9-201ENST00000372330 UNC79Q9P2D8 2635 aa12.5□□□□□ -0.41
MMP9-201ENST00000372330 IGHV4-28A0A0C4DH34 117 aa12.5□□□□□ -0.41
MMP9-201ENST00000372330 LOC100131303A0A0U1RQF7 123 aa12.5□□□□□ -0.41
MMP9-201ENST00000372330 OCR1Q9BZK8 76 aa12.5□□□□□ -0.41
MMP9-201ENST00000372330 ANK3Q12955 4377 aaKnown RBP12.5□□□□□ -0.41
MMP9-201ENST00000372330 TRGV2A0A075B6R0 118 aa12.49□□□□□ -0.41
MMP9-201ENST00000372330 Q6ZQY7 126 aa12.49□□□□□ -0.41
MMP9-201ENST00000372330 JMJD1CQ15652 2540 aa12.49□□□□□ -0.41
MMP9-201ENST00000372330 SCXQ7RTU7 201 aa12.48□□□□□ -0.41
MMP9-201ENST00000372330 LINC01006Q8NI28 216 aa12.48□□□□□ -0.41
MMP9-201ENST00000372330 TRGV4A0A0C4DH28 118 aa12.47□□□□□ -0.41
MMP9-201ENST00000372330 GCN1Q92616 2671 aaKnown RBP12.47□□□□□ -0.41
MMP9-201ENST00000372330 A0A1B0GUV1 79 aa12.45□□□□□ -0.42
MMP9-201ENST00000372330 Q1T7F1 81 aa12.45□□□□□ -0.42
MMP9-201ENST00000372330 KIAA0087Q14695 138 aa12.45□□□□□ -0.42
MMP9-201ENST00000372330 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.45□□□□□ -0.42
MMP9-201ENST00000372330 C16orf74Q96GX8 76 aa12.45□□□□□ -0.42
MMP9-201ENST00000372330 FASNP49327 2511 aaKnown RBP12.45□□□□□ -0.42
MMP9-201ENST00000372330 NOTCH3Q9UM47 2321 aa12.44□□□□□ -0.42
MMP9-201ENST00000372330 CMC4P56277 68 aaPredicted RBP12.44□□□□□ -0.42
MMP9-201ENST00000372330 IGLV6-57P01721 117 aa12.43□□□□□ -0.42
MMP9-201ENST00000372330 C2CD3Q4AC94 2353 aa12.43□□□□□ -0.42
MMP9-201ENST00000372330 hDV103S1A0JD37 113 aa12.42□□□□□ -0.42
MMP9-201ENST00000372330 GIG44P09565 113 aaPredicted RBP12.42□□□□□ -0.42
MMP9-201ENST00000372330 COX7BP24311 80 aa12.42□□□□□ -0.42
MMP9-201ENST00000372330 CD164L2Q6UWJ8 174 aa12.42□□□□□ -0.42
MMP9-201ENST00000372330 SMR3AQ99954 134 aa12.42□□□□□ -0.42
MMP9-201ENST00000372330 IGLV1-51P01701 117 aa12.4□□□□□ -0.42
MMP9-201ENST00000372330 IGKV4-1P06312 121 aa12.4□□□□□ -0.42
MMP9-201ENST00000372330 Q8NDZ9 215 aa12.4□□□□□ -0.42
MMP9-201ENST00000372330 WFDC10AQ9H1F0 79 aa12.4□□□□□ -0.42
MMP9-201ENST00000372330 HECTD1Q9ULT8 2610 aa12.4□□□□□ -0.42
MMP9-201ENST00000372330 C19orf73Q9NVV2 129 aa12.39□□□□□ -0.43
MMP9-201ENST00000372330 HIGD2AQ9BW72 106 aa12.38□□□□□ -0.43
MMP9-201ENST00000372330 DIRC1Q969H9 104 aa12.36□□□□□ -0.43
MMP9-201ENST00000372330 C9orf116Q5BN46 136 aaPredicted RBP12.36□□□□□ -0.43
MMP9-201ENST00000372330 LINC00269Q8N2A0 174 aa12.35□□□□□ -0.43
MMP9-201ENST00000372330 CSNK1G2-AS1Q8NCQ2 148 aa12.35□□□□□ -0.43
MMP9-201ENST00000372330 Q6ZRP5 223 aa12.34□□□□□ -0.43
MMP9-201ENST00000372330 DAD1P61803 113 aa12.33□□□□□ -0.44
MMP9-201ENST00000372330 CD164Q04900 197 aa12.33□□□□□ -0.44
MMP9-201ENST00000372330 HIVEP2P31629 2446 aa12.32□□□□□ -0.44
MMP9-201ENST00000372330 Q8N9L7 120 aa12.32□□□□□ -0.44
MMP9-201ENST00000372330 LCE6AA0A183 80 aa12.32□□□□□ -0.44
MMP9-201ENST00000372330 NOTCH2Q04721 2471 aa12.31□□□□□ -0.44
MMP9-201ENST00000372330 A0A0J9YWU9 116 aa12.29□□□□□ -0.44
MMP9-201ENST00000372330 IGHV4-30-4P0DP06 118 aa12.29□□□□□ -0.44
MMP9-201ENST00000372330 CLPSL2Q6UWE3 100 aa12.29□□□□□ -0.44
MMP9-201ENST00000372330 C1orf64Q8NEQ6 169 aa12.29□□□□□ -0.44
MMP9-201ENST00000372330 CHCHD10Q8WYQ3 142 aaPredicted RBP12.29□□□□□ -0.44
MMP9-201ENST00000372330 ZNF73O43830 326 aaPredicted RBP12.28□□□□□ -0.44
MMP9-201ENST00000372330 ELOF1P60002 83 aaKnown RBP12.28□□□□□ -0.44
MMP9-201ENST00000372330 HIGD2BQ4VC39 106 aa12.28□□□□□ -0.44
MMP9-201ENST00000372330 CELA1Q9UNI1 258 aa12.28□□□□□ -0.44
MMP9-201ENST00000372330 OTOGQ6ZRI0 2925 aa12.27□□□□□ -0.44
MMP9-201ENST00000372330 VWFP04275 2813 aa12.26□□□□□ -0.45
MMP9-201ENST00000372330 GYPEP15421 78 aa12.25□□□□□ -0.45
MMP9-201ENST00000372330 KRTAP10-3P60369 221 aa12.25□□□□□ -0.45
MMP9-201ENST00000372330 TRAV22A0A0B4J277 110 aa12.24□□□□□ -0.45
MMP9-201ENST00000372330 A0A1B0GW54 56 aa12.23□□□□□ -0.45
MMP9-201ENST00000372330 UNQ6190/PRO20217Q6UXQ8 127 aa12.23□□□□□ -0.45
MMP9-201ENST00000372330 CYP4F30PQ9H0H9 118 aa12.23□□□□□ -0.45
MMP9-201ENST00000372330 LRCOL1A6NCL2 159 aa12.22□□□□□ -0.45
MMP9-201ENST00000372330 LYRM9A8MSI8 78 aa12.22□□□□□ -0.45
MMP9-201ENST00000372330 ZCCHC13Q8WW36 166 aaKnown RBP12.22□□□□□ -0.45
MMP9-201ENST00000372330 REG3AQ06141 175 aa12.21□□□□□ -0.45
MMP9-201ENST00000372330 C10orf25Q5T742 122 aa12.21□□□□□ -0.45
MMP9-201ENST00000372330 PSPHP1O15172 72 aa12.21□□□□□ -0.46
MMP9-201ENST00000372330 SPAG11BQ08648 103 aa12.21□□□□□ -0.46
MMP9-201ENST00000372330 GVQW2A0A096LPI5 108 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms