RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 LINC00612Q8N6U2 182 aa7.85□□□□□ -1.15
SMARCA1-201ENST00000371121 TRGV4A0A0C4DH28 118 aa7.84□□□□□ -1.15
SMARCA1-201ENST00000371121 LINC01356Q8N9X3 169 aa7.84□□□□□ -1.15
SMARCA1-201ENST00000371121 LINC01006Q8NI28 216 aa7.84□□□□□ -1.15
SMARCA1-201ENST00000371121 PKD1L1Q8TDX9 2849 aa7.84□□□□□ -1.15
SMARCA1-201ENST00000371121 MIFP14174 115 aa7.84□□□□□ -1.16
SMARCA1-201ENST00000371121 C11orf44Q8N8P7 122 aa7.83□□□□□ -1.16
SMARCA1-201ENST00000371121 OCR1Q9BZK8 76 aa7.83□□□□□ -1.16
SMARCA1-201ENST00000371121 DNAH1Q9P2D7 4330 aa7.83□□□□□ -1.16
SMARCA1-201ENST00000371121 BBC3Q96PG8 261 aaPredicted RBP7.83□□□□□ -1.16
SMARCA1-201ENST00000371121 ZFYVE26Q68DK2 2539 aa7.82□□□□□ -1.16
SMARCA1-201ENST00000371121 TMEM254Q8TBM7 123 aa7.82□□□□□ -1.16
SMARCA1-201ENST00000371121 A0A096LPF7 62 aa7.82□□□□□ -1.16
SMARCA1-201ENST00000371121 IGKV4-1P06312 121 aa7.82□□□□□ -1.16
SMARCA1-201ENST00000371121 NREPQ16612 68 aa7.82□□□□□ -1.16
SMARCA1-201ENST00000371121 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.82□□□□□ -1.16
SMARCA1-201ENST00000371121 IGLV10-54A0A075B6I4 117 aa7.82□□□□□ -1.16
SMARCA1-201ENST00000371121 A0A0U1RQV1 116 aa7.82□□□□□ -1.16
SMARCA1-201ENST00000371121 LAMTOR3Q9UHA4 124 aa7.82□□□□□ -1.16
SMARCA1-201ENST00000371121 F8WDY8 70 aa7.81□□□□□ -1.16
SMARCA1-201ENST00000371121 CD164L2Q6UWJ8 174 aa7.81□□□□□ -1.16
SMARCA1-201ENST00000371121 UNQ6190/PRO20217Q6UXQ8 127 aa7.81□□□□□ -1.16
SMARCA1-201ENST00000371121 SETD2Q9BYW2 2564 aaPredicted RBP7.81□□□□□ -1.16
SMARCA1-201ENST00000371121 LYSTQ99698 3801 aa7.81□□□□□ -1.16
SMARCA1-201ENST00000371121 FN1P02751 2386 aaKnown RBP7.81□□□□□ -1.16
SMARCA1-201ENST00000371121 BPY2O14599 106 aa7.8□□□□□ -1.16
SMARCA1-201ENST00000371121 NAV2Q8IVL1 2488 aa7.8□□□□□ -1.16
SMARCA1-201ENST00000371121 CHCHD10Q8WYQ3 142 aaPredicted RBP7.79□□□□□ -1.16
SMARCA1-201ENST00000371121 CELA1Q9UNI1 258 aa7.79□□□□□ -1.16
SMARCA1-201ENST00000371121 GYPEP15421 78 aa7.79□□□□□ -1.16
SMARCA1-201ENST00000371121 BRK1Q8WUW1 75 aa7.79□□□□□ -1.16
SMARCA1-201ENST00000371121 UBR5O95071 2799 aaPredicted RBP7.79□□□□□ -1.16
SMARCA1-201ENST00000371121 PRB1P04280 392 aa7.78□□□□□ -1.16
SMARCA1-201ENST00000371121 MPLKIPQ8TAP9 179 aa7.78□□□□□ -1.16
SMARCA1-201ENST00000371121 HIVEP1P15822 2718 aa7.78□□□□□ -1.16
SMARCA1-201ENST00000371121 ITPR3Q14573 2671 aa7.78□□□□□ -1.16
SMARCA1-201ENST00000371121 IGHV4-30-4P0DP06 118 aa7.77□□□□□ -1.16
SMARCA1-201ENST00000371121 NDUFC1O43677 76 aa7.77□□□□□ -1.17
SMARCA1-201ENST00000371121 DEFB130BP0DP73 79 aa7.77□□□□□ -1.17
SMARCA1-201ENST00000371121 DEFB130AP0DP74 79 aa7.77□□□□□ -1.17
SMARCA1-201ENST00000371121 PKD1L2Q7Z442 2459 aa7.76□□□□□ -1.17
SMARCA1-201ENST00000371121 ERC2-IT1O76042 136 aa7.76□□□□□ -1.17
SMARCA1-201ENST00000371121 ABCA12Q86UK0 2595 aa7.76□□□□□ -1.17
SMARCA1-201ENST00000371121 HIGD2AQ9BW72 106 aa7.76□□□□□ -1.17
SMARCA1-201ENST00000371121 A0A0J9YWU9 116 aa7.75□□□□□ -1.17
SMARCA1-201ENST00000371121 CCL24O00175 119 aa7.75□□□□□ -1.17
SMARCA1-201ENST00000371121 CYSRT1A8MQ03 144 aa7.75□□□□□ -1.17
SMARCA1-201ENST00000371121 ELOF1P60002 83 aaKnown RBP7.74□□□□□ -1.17
SMARCA1-201ENST00000371121 REG3AQ06141 175 aa7.74□□□□□ -1.17
SMARCA1-201ENST00000371121 MYO18BQ8IUG5 2567 aa7.73□□□□□ -1.17
SMARCA1-201ENST00000371121 LCE6AA0A183 80 aa7.73□□□□□ -1.17
SMARCA1-201ENST00000371121 PRYO14603 147 aa7.73□□□□□ -1.17
SMARCA1-201ENST00000371121 ESM1Q9NQ30 184 aa7.73□□□□□ -1.17
SMARCA1-201ENST00000371121 C6orf48Q9UBA6 75 aa7.73□□□□□ -1.17
SMARCA1-201ENST00000371121 X6R8D5 127 aa7.73□□□□□ -1.17
SMARCA1-201ENST00000371121 Q6ZRP5 223 aa7.72□□□□□ -1.17
SMARCA1-201ENST00000371121 XAGE1AQ9HD64 81 aa7.72□□□□□ -1.17
SMARCA1-201ENST00000371121 IGLV1-51P01701 117 aa7.72□□□□□ -1.17
SMARCA1-201ENST00000371121 ATP5EP56381 51 aaPredicted RBP7.72□□□□□ -1.17
SMARCA1-201ENST00000371121 SONP18583 2426 aaKnown RBP7.72□□□□□ -1.17
SMARCA1-201ENST00000371121 KLK12Q9UKR0 248 aa7.72□□□□□ -1.17
SMARCA1-201ENST00000371121 PDE6GP18545 87 aa7.71□□□□□ -1.17
SMARCA1-201ENST00000371121 ZNF73O43830 326 aaPredicted RBP7.71□□□□□ -1.18
SMARCA1-201ENST00000371121 ESRGQ1W209 222 aa7.71□□□□□ -1.18
SMARCA1-201ENST00000371121 PDZD2O15018 2839 aa7.7□□□□□ -1.18
SMARCA1-201ENST00000371121 KRTAP10-9P60411 292 aa7.7□□□□□ -1.18
SMARCA1-201ENST00000371121 C1orf195Q5TG92 126 aa7.7□□□□□ -1.18
SMARCA1-201ENST00000371121 TENM1Q9UKZ4 2725 aa7.7□□□□□ -1.18
SMARCA1-201ENST00000371121 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
SMARCA1-201ENST00000371121 ANGP03950 147 aaKnown RBP7.7□□□□□ -1.18
SMARCA1-201ENST00000371121 COX7BP24311 80 aa7.7□□□□□ -1.18
SMARCA1-201ENST00000371121 A8MU10 97 aa7.69□□□□□ -1.18
SMARCA1-201ENST00000371121 LINC00528Q8N1L1 170 aa7.69□□□□□ -1.18
SMARCA1-201ENST00000371121 VPREB1P12018 145 aa7.69□□□□□ -1.18
SMARCA1-201ENST00000371121 DSCR9P59020 149 aa7.69□□□□□ -1.18
SMARCA1-201ENST00000371121 SPAG11BQ08648 103 aa7.69□□□□□ -1.18
SMARCA1-201ENST00000371121 ZCCHC13Q8WW36 166 aaKnown RBP7.68□□□□□ -1.18
SMARCA1-201ENST00000371121 KRTAP1-3Q8IUG1 177 aa7.68□□□□□ -1.18
SMARCA1-201ENST00000371121 DIRC1Q969H9 104 aa7.68□□□□□ -1.18
SMARCA1-201ENST00000371121 LRCOL1A6NCL2 159 aa7.67□□□□□ -1.18
SMARCA1-201ENST00000371121 GVQW2A0A096LPI5 108 aaPredicted RBP7.67□□□□□ -1.18
SMARCA1-201ENST00000371121 PRO0255Q9UI72 69 aa7.67□□□□□ -1.18
SMARCA1-201ENST00000371121 DNAH10Q8IVF4 4471 aa7.67□□□□□ -1.18
SMARCA1-201ENST00000371121 SEC61GP60059 68 aa7.66□□□□□ -1.18
SMARCA1-201ENST00000371121 PRR34Q9NV39 138 aa7.66□□□□□ -1.18
SMARCA1-201ENST00000371121 FLNAP21333 2647 aaKnown RBP7.66□□□□□ -1.18
SMARCA1-201ENST00000371121 C3orf84H3BNL1 204 aa7.66□□□□□ -1.18
SMARCA1-201ENST00000371121 FUSP35637 526 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMARCA1-201ENST00000371121 SMIM29Q86T20 159 aa7.66□□□□□ -1.18
SMARCA1-201ENST00000371121 DNAJC9-AS1A6NH13 148 aa7.66□□□□□ -1.18
SMARCA1-201ENST00000371121 DAD1P61803 113 aa7.66□□□□□ -1.18
SMARCA1-201ENST00000371121 DEFB4AO15263 64 aa7.65□□□□□ -1.18
SMARCA1-201ENST00000371121 C1orf64Q8NEQ6 169 aa7.65□□□□□ -1.18
SMARCA1-201ENST00000371121 PRR15Q8IV56 129 aa7.64□□□□□ -1.19
SMARCA1-201ENST00000371121 FAM30AQ9NZY2 134 aa7.64□□□□□ -1.19
SMARCA1-201ENST00000371121 TENM4Q6N022 2769 aa7.64□□□□□ -1.19
SMARCA1-201ENST00000371121 CCDC168Q8NDH2 2452 aa7.64□□□□□ -1.19
SMARCA1-201ENST00000371121 CMYA5Q8N3K9 4069 aa7.63□□□□□ -1.19
SMARCA1-201ENST00000371121 Q1T7F1 81 aa7.63□□□□□ -1.19
SMARCA1-201ENST00000371121 KRTAP26-1Q6PEX3 210 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms