RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 SERP1Q9Y6X1 66 aa8.16□□□□□ -1.1
DEPDC1-201ENST00000370966 A0A087WSZ3 146 aa8.15□□□□□ -1.1
DEPDC1-201ENST00000370966 PRR4Q16378 134 aa8.15□□□□□ -1.1
DEPDC1-201ENST00000370966 C22orf24Q9Y442 160 aa8.15□□□□□ -1.1
DEPDC1-201ENST00000370966 TRBV7-6A0A0J9YX20 115 aa8.15□□□□□ -1.1
DEPDC1-201ENST00000370966 LINC00208Q96KT6 92 aa8.15□□□□□ -1.11
DEPDC1-201ENST00000370966 FAM218AQ96MZ4 157 aa8.14□□□□□ -1.11
DEPDC1-201ENST00000370966 LITAFQ99732 161 aa8.14□□□□□ -1.11
DEPDC1-201ENST00000370966 USP24Q9UPU5 2620 aa8.14□□□□□ -1.11
DEPDC1-201ENST00000370966 NHLRC4P0CG21 123 aaPredicted RBP8.14□□□□□ -1.11
DEPDC1-201ENST00000370966 Q8NAQ8 132 aa8.13□□□□□ -1.11
DEPDC1-201ENST00000370966 HECTD1Q9ULT8 2610 aa8.13□□□□□ -1.11
DEPDC1-201ENST00000370966 C4orf26Q17RF5 130 aa8.12□□□□□ -1.11
DEPDC1-201ENST00000370966 A0A1B0GW54 56 aa8.12□□□□□ -1.11
DEPDC1-201ENST00000370966 SPATA3Q8NHX4 192 aa8.12□□□□□ -1.11
DEPDC1-201ENST00000370966 IGLV5-52A0A0A0MRZ9 124 aa8.12□□□□□ -1.11
DEPDC1-201ENST00000370966 A0A096LNT2 108 aa8.11□□□□□ -1.11
DEPDC1-201ENST00000370966 TMEM254Q8TBM7 123 aa8.11□□□□□ -1.11
DEPDC1-201ENST00000370966 PRR15LQ9BU68 103 aa8.11□□□□□ -1.11
DEPDC1-201ENST00000370966 BCE1O60756 84 aa8.11□□□□□ -1.11
DEPDC1-201ENST00000370966 RPS28P62857 69 aaKnown RBP8.1□□□□□ -1.11
DEPDC1-201ENST00000370966 CHD9Q3L8U1 2897 aa8.1□□□□□ -1.11
DEPDC1-201ENST00000370966 PRLHP81277 87 aa8.1□□□□□ -1.11
DEPDC1-201ENST00000370966 SMCR5Q8TEV8 140 aa8.1□□□□□ -1.11
DEPDC1-201ENST00000370966 LINC00167Q96N53 147 aa8.1□□□□□ -1.11
DEPDC1-201ENST00000370966 ELOF1P60002 83 aaKnown RBP8.09□□□□□ -1.11
DEPDC1-201ENST00000370966 KIAA0087Q14695 138 aa8.09□□□□□ -1.11
DEPDC1-201ENST00000370966 GVQW2A0A096LPI5 108 aaPredicted RBP8.09□□□□□ -1.11
DEPDC1-201ENST00000370966 CSNK1G2-AS1Q8NCQ2 148 aa8.08□□□□□ -1.12
DEPDC1-201ENST00000370966 C1orf134Q5TEV5 83 aa8.08□□□□□ -1.12
DEPDC1-201ENST00000370966 CRYGAP11844 174 aa8.08□□□□□ -1.12
DEPDC1-201ENST00000370966 MGAM2Q2M2H8 2515 aa8.07□□□□□ -1.12
DEPDC1-201ENST00000370966 HCG22E2RYF7 251 aa8.07□□□□□ -1.12
DEPDC1-201ENST00000370966 CIRBP-AS1Q8TBR5 109 aa8.07□□□□□ -1.12
DEPDC1-201ENST00000370966 KRTAP24-1Q3LI83 254 aa8.06□□□□□ -1.12
DEPDC1-201ENST00000370966 LOC110117498A0A087WWA1 95 aa8.06□□□□□ -1.12
DEPDC1-201ENST00000370966 A6NED7 52 aa8.06□□□□□ -1.12
DEPDC1-201ENST00000370966 HTTP42858 3142 aa8.06□□□□□ -1.12
DEPDC1-201ENST00000370966 IGHV6-1A0A0B4J1U7 121 aa8.06□□□□□ -1.12
DEPDC1-201ENST00000370966 PMAIP1Q13794 54 aa8.06□□□□□ -1.12
DEPDC1-201ENST00000370966 BPTFQ12830 3046 aa8.05□□□□□ -1.12
DEPDC1-201ENST00000370966 Q6ZQT0 140 aa8.05□□□□□ -1.12
DEPDC1-201ENST00000370966 C5orf42Q9H799 3197 aa8.05□□□□□ -1.12
DEPDC1-201ENST00000370966 K7ERS5 55 aa8.03□□□□□ -1.12
DEPDC1-201ENST00000370966 Q6ZRX8 168 aa8.03□□□□□ -1.12
DEPDC1-201ENST00000370966 H0Y9P7 68 aa8.03□□□□□ -1.12
DEPDC1-201ENST00000370966 RANBP2P49792 3224 aaKnown RBP8.03□□□□□ -1.12
DEPDC1-201ENST00000370966 DEFB116Q30KQ4 102 aa8.03□□□□□ -1.12
DEPDC1-201ENST00000370966 hDV103S1A0JD37 113 aa8.02□□□□□ -1.13
DEPDC1-201ENST00000370966 FLNAP21333 2647 aaKnown RBP8.02□□□□□ -1.13
DEPDC1-201ENST00000370966 Q8NBF4 154 aa8.02□□□□□ -1.13
DEPDC1-201ENST00000370966 C19orf73Q9NVV2 129 aa8.02□□□□□ -1.13
DEPDC1-201ENST00000370966 MDFIQ99750 246 aa8.02□□□□□ -1.13
DEPDC1-201ENST00000370966 IGLV6-57P01721 117 aa8.01□□□□□ -1.13
DEPDC1-201ENST00000370966 DNAH10OSP0CZ25 163 aa8.01□□□□□ -1.13
DEPDC1-201ENST00000370966 GIG44P09565 113 aaPredicted RBP8□□□□□ -1.13
DEPDC1-201ENST00000370966 CENPEQ02224 2701 aa8□□□□□ -1.13
DEPDC1-201ENST00000370966 VPREB1P12018 145 aa8□□□□□ -1.13
DEPDC1-201ENST00000370966 LINC00588Q9Y4M8 146 aa8□□□□□ -1.13
DEPDC1-201ENST00000370966 LINC00612Q8N6U2 182 aa7.99□□□□□ -1.13
DEPDC1-201ENST00000370966 EIF4EBP3O60516 100 aaPredicted RBP7.98□□□□□ -1.13
DEPDC1-201ENST00000370966 PRR34Q9NV39 138 aa7.98□□□□□ -1.13
DEPDC1-201ENST00000370966 C16orf90A8MZG2 172 aa7.98□□□□□ -1.13
DEPDC1-201ENST00000370966 TRANK1O15050 2925 aa7.97□□□□□ -1.13
DEPDC1-201ENST00000370966 ITPR3Q14573 2671 aa7.97□□□□□ -1.13
DEPDC1-201ENST00000370966 ATRQ13535 2644 aa7.97□□□□□ -1.13
DEPDC1-201ENST00000370966 SMIM29Q86T20 159 aa7.97□□□□□ -1.13
DEPDC1-201ENST00000370966 PCOTHQ58A44 107 aa7.96□□□□□ -1.13
DEPDC1-201ENST00000370966 Q6ZRP5 223 aa7.96□□□□□ -1.13
DEPDC1-201ENST00000370966 LINC00476Q8WZB0 136 aa7.95□□□□□ -1.14
DEPDC1-201ENST00000370966 MAST4O15021 2626 aa7.95□□□□□ -1.14
DEPDC1-201ENST00000370966 PSPHP1O15172 72 aa7.95□□□□□ -1.14
DEPDC1-201ENST00000370966 LIMD2Q9BT23 127 aa7.95□□□□□ -1.14
DEPDC1-201ENST00000370966 C1orf64Q8NEQ6 169 aa7.95□□□□□ -1.14
DEPDC1-201ENST00000370966 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
DEPDC1-201ENST00000370966 HELZ2Q9BYK8 2649 aaKnown RBP7.94□□□□□ -1.14
DEPDC1-201ENST00000370966 NBDYA0A0U1RRE5 68 aa7.94□□□□□ -1.14
DEPDC1-201ENST00000370966 KCNQ1DNQ9H478 68 aa7.92□□□□□ -1.14
DEPDC1-201ENST00000370966 PHF5AQ7RTV0 110 aaKnown RBP7.92□□□□□ -1.14
DEPDC1-201ENST00000370966 CFAP46Q8IYW2 2715 aa7.91□□□□□ -1.14
DEPDC1-201ENST00000370966 TRBV7-4A0A0J9YYF1 115 aa7.91□□□□□ -1.14
DEPDC1-201ENST00000370966 LINC00528Q8N1L1 170 aa7.91□□□□□ -1.14
DEPDC1-201ENST00000370966 EPM2AB3EWF7 344 aa7.91□□□□□ -1.14
DEPDC1-201ENST00000370966 H3BPC8 53 aa7.91□□□□□ -1.14
DEPDC1-201ENST00000370966 ZNF575Q86XF7 245 aa7.91□□□□□ -1.14
DEPDC1-201ENST00000370966 MOBPQ13875 183 aa7.91□□□□□ -1.14
DEPDC1-201ENST00000370966 ST20-AS1Q8NBB2 130 aa7.91□□□□□ -1.14
DEPDC1-201ENST00000370966 ZNF292O60281 2723 aa7.9□□□□□ -1.14
DEPDC1-201ENST00000370966 KRTAP1-3Q8IUG1 177 aa7.89□□□□□ -1.15
DEPDC1-201ENST00000370966 IGLV1-50A0A075B6I6 118 aa7.88□□□□□ -1.15
DEPDC1-201ENST00000370966 LINC00336Q6ZUF6 198 aa7.87□□□□□ -1.15
DEPDC1-201ENST00000370966 KRTAP10-3P60369 221 aa7.87□□□□□ -1.15
DEPDC1-201ENST00000370966 SERTAD4-AS1Q5TG53 156 aa7.87□□□□□ -1.15
DEPDC1-201ENST00000370966 TM2D3Q9BRN9 247 aa7.87□□□□□ -1.15
DEPDC1-201ENST00000370966 C15orf56Q8N910 161 aa7.86□□□□□ -1.15
DEPDC1-201ENST00000370966 RTL8CO15255 209 aa7.86□□□□□ -1.15
DEPDC1-201ENST00000370966 A0A0C4DFX4 3053 aa7.85□□□□□ -1.15
DEPDC1-201ENST00000370966 CHTF8P0CG12 524 aa7.84□□□□□ -1.15
DEPDC1-201ENST00000370966 KRTAP10-11P60412 298 aa7.84□□□□□ -1.15
DEPDC1-201ENST00000370966 TRAV22A0A0B4J277 110 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms